Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00565 ATGAACCGGACATTCAATTCATACCCAGATGAAAACTATGCGAATGTTAGGAGATCCATGAGGCAGACTGAGGATGATCATCACAAGAACCTATCGGACAAGGATCCGCACTTTGATTTCAAGAGCAACCATGAATTGAAATTTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGTGGTTCTGATGATGTTCATTTCTGTGATATTTTCGGTCTCGGTGGTTTTTAGAGATCCACCGTCGGATGCTGTAATTGAAGGTTCAGATGTGTGGATTCCTCAGTGGAGTTCTGACCCAGTAGATTCTAAGGTTGGAGATCTTCAAACAGTTGTACAGCCAGTTGATAAACTGCTTAGTGGCCTTCTTTCTGCCAAACATGTGGTTGGTTCTTGTCTCAGTAGGTACAATTCAGTTGCTTATCAACACAAGCTGGCTTACGAACCCTCTGCTTACTTACTCTCCACATTGCGGGGTTATGAAGATCTTCATAAGCGTTGTGGAGTTCATACTGAATCTTACAACAAAACTTTGGAGCAGCTTAGGTCTAATGGTAGTAGCAGCCCCTCAGACTGTAAATATCTTCTGTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACCCTTGCTTCAGCGTTTCTTTATGCTCTCCTCACAAATCGCGTTCTTCTTGTTGACCCTGGAACTGACATGGCTGGTCTTCTCTGTGAACCATTTCCTGAGGTTTCTTGGTTTCTTCCCCAAGATTTCCCATTAAAAGATGACTTCAGTAGTTTCAACCAGAACTCTCCTAATTGCTATGGGAAAATAATGAAGAATAGCATAACGCCAGATTCAAGTGGAATGATCTTGCCATCTGTTGTTTATCTTCATTTGGTCCATGATTACGACGATGATGATAAGCTTTTCTTCTGTGATCAAGACCAAGCTCTTCTGCAGCAATCTCCTTGGCTTGTTATGAAAACAGACAATTATTTTGTCCCATCTCTCTTTTTGATCCCATCATTCGAGAAAGAACTGAATGATCTTTTCCCAAATAAAGATACGGTTTTCCACTTCTTGGGTCGATATCTGTTCCACCCCACAAATTCGGTTTGGGGACTGATTACGAGATATTATCACGCTTACTTGGCTAGAGCTAGCGAAAGAATAGGCATTCAGATTAGAGTGTTTGATACAGGAACTGGACCTTTTCAACACATTCTGGACCAGGTTCTGGACTGCACCATGAAAGAGAATCTGTTGCCACAAACCGAGAGGCAAACGTATGCCATTGATCCAGTTAGTAATCAAAAGTCAAAAGCCGTGCTGATAACTTCATTGAGCGCTGGTTACTTTGAGAAGTTAAGAGATATTTACTGGGAGAATCCAACAGTAACGGGGGAGATAATTAGTTTCTACCAACCAAGTCATGAGGAACACCAGCAAACTGAAAAAAGTATACATAACCAAAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTGATGTATTAGTCACCAGTTCATGGTCGACCTTTGGATACGTGGCTCAAGGTCTTGGTGGTCTGAAGCCATGGATATTGTACAAACCCGAAAATCGTACTGCACCGGATCCACCTTGCCGTCGAGCCATGTCCATGGAGCCTTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGTAAGCTTGTTCCTCATGTGAGGCACTGTGAGGACATGAGCTGGGGACTTAAGTTGGTTGATGATCCATATGATTGA 1761 42.48 MNRTFNSYPDENYANVRRSMRQTEDDHHKNLSDKDPHFDFKSNHELKFGFSSIRVMGMFVVLMMFISVIFSVSVVFRDPPSDAVIEGSDVWIPQWSSDPVDSKVGDLQTVVQPVDKLLSGLLSAKHVVGSCLSRYNSVAYQHKLAYEPSAYLLSTLRGYEDLHKRCGVHTESYNKTLEQLRSNGSSSPSDCKYLLWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMAGLLCEPFPEVSWFLPQDFPLKDDFSSFNQNSPNCYGKIMKNSITPDSSGMILPSVVYLHLVHDYDDDDKLFFCDQDQALLQQSPWLVMKTDNYFVPSLFLIPSFEKELNDLFPNKDTVFHFLGRYLFHPTNSVWGLITRYYHAYLARASERIGIQIRVFDTGTGPFQHILDQVLDCTMKENLLPQTERQTYAIDPVSNQKSKAVLITSLSAGYFEKLRDIYWENPTVTGEIISFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMSWGLKLVDDPYD* 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3648040 3651515 - CsaV3_1G005650.1 Csa01g00565 515062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00565 586 Gene3D - 369 532 - -
Csa01g00565 586 Pfam Xyloglucan fucosyltransferase 104 554 IPR004938 GO:0008107|GO:0016020|GO:0042546
Csa01g00565 586 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 31 582 - -
Csa01g00565 586 PANTHER FUCOSYLTRANSFERASE 2-RELATED 31 582 IPR004938 GO:0008107|GO:0016020|GO:0042546
Csa01g00565 586 Gene3D - 188 231 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00565 Csa-Chr1:3648040 Csa04g00754 Csa-Chr4:5166215 2.63E-178 dispersed
Csa01g00565 Csa-Chr1:3648040 Csa05g02478 Csa-Chr5:26514398 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00565 K13681 - csv:101219153 1174.46