Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g00707 | ATGAAGAACCTCCTTAAGAAGTTCCACATCATGTCCAGTGGTCAGTCTGACGATGTAGCTGAAGGGTCTACTTCATCGAGGAGCAATAAAGTAATGGAGGTTTCATCGCCTGATAAGCTGCCATCTCGCTCCCGGCCGACCCATTTCAGTTCGGAGCATAAACCCTTCTCGGGAATATCCGGTTGGTTGAACTCTGTTACAAATAGGCGTAGCCCCAGTCCTCCATCATCTGCGGATCCTACTGCAGGCGAGATAATGGAGCCATCGGATTCAGTATCTAGCAGAGACGCTGCAATGGATACATCTAGGCATGATTCAGGGTCGAGTAATTCGAGGGATCCTGATATAGAAGAAGAGTATCAGATACAGCTTGCTTTGGAAATGAGTGCTCGAGAGGATCCTGAAGCGGCTCAGATTGAGGCTGTGAAGCAGATCAGTTTGGGGTCATGTGATCCTGATAACACTCCAGCTGAAGTTATTGCCTTCAGATATTGGAATTACAATTCTCTTAGCTATGATGACAAGATCTTGGATGGCTTCTATGACCTATATGGAGTCTTCACCAGATCCACTTCAGAAAGAATGCCTTCCCTAGTTGATCTGCAAGGAGCACCAATGTCTGACAGTGTCACTTGGGAAGCAGTTCTGATAAATAAAGCTGCTGATGCTAACTTATTGAAACTTGAACAGACAGCATTGGAGATGGCTATCAAGATGCAGACAGAGTCTCCAATTTCTGTAAATCATTATTTGGTGCGGAAACTTGCTGCTTTAGTTTCAGATCATATGGGGGGACCAGTGGGTGATCCTGAAAAGATGTTGAGAAAATGGAGAAATCTTAGTTACAGCTTGAAAGCAACCCTTGGGAGTATGGTTTTGCCACTTGGCTCCCTTACTGTTGGGTTGGCCCGTCATCGTGCATTGTTATTCAAGTTTTTGGCAGATGGCGTGGGTATTCCTTGTAGGTTGGTGAAAGGACCACAGTACACAGGTTCTGATGATGTGGCAATGAACTTTGTAAAGATTGATGATGGAAGGGAGTACATTGTGGATTTAATGGCAGATCCTGGTGCACTTATTCCAGCTGATGTTGCTGGATCGCATGTAGAGTATGATGGATCTCCTTTTTCGGCCAGTCCAGTTTCTAGAGATGTTGATTCCTCTCAGGCAGCATCTTCAAGCAGTGGGGTTGGCAGTTCATTAGAGGGAAATTCAGATTTTGGGATATCAGATAGGAAACCAAAGGCCCGCAATCTCAGTGCCACAAAGGAATACGATTCTCCCAATATCGACAAGGTCCCATCACGTGATTTTGCTAGCAAATCAAATTATCCTGGTATGCACACTAGATCACCATCTTGGACTGAGGGTGTTAGTTCACCTGCAGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAAGAGAATCCACGGTTGGCTCAGAAGCTTCATGACGTGTTGCTTGAAAGTGGTGTAGTTGCTCCCCCAAATTTGTTTACCGAGGCATACCCTGACCAAATAGATGTTATTGTCGAGTCTAAGTCACCAACTGAAGACAAGGATCAAAGTAGAAAGCTGCCTGGTATCTGTGAAAGTGCAGATAAGAATGATCCTCGTCTATCTAACTTTTTGCCTCCCTTGCCTCAGCCCAGACTGCATTCTAGAGCCAGCCCTACCCATGGCCAACAACTGTACATTAAACCTCTGGAATTCAACCTTTCTCTTGATTCAAGAGAAGCAGGCGGACAACCTATACCCTTACCATTTGAGGTAACTCCAGTGAAGTATGGGAGAAATGTACCTGTTGCTGCAGCAGCAGCAGCTGCCGCAGCTGTTGTTGCATCGTCAATGGTGGTAGCTGCAGCAAAGAGTAGCGATGCAAATCTTGAAATTCCTGTAGCAGCTGCTGCCACTGCAACCGCTGCTGCAGTGGTTGCAACAACTGCAGCAGTCAACAAGCAATATGAGCAGGTTGAGGCTGATGCTGCTCTTTATGAGCTGCGTGGAAGTGGAGATAGGGAGCATGATGCCTGTGGAGACAATTCAGAGGGTGAACGTATATCAGATAGATCAGCTGGTAACGAAAGCACAAAATCTGACATTACCCTTGATGATGTTGCAGAATGTGAGATCCCATGGGAAGAAATTTCCTTGGGAGAGCGTATTGGACTTGGATCGTATGGGGAGGTCTATCGTGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGGTTTCTAGACCAGGACATTTCTGGTGAATCTCTTGAAGAATTCAAAAGTGAGGTTCGAATTATGAAAAGGCTTCGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTGACACGTGCTCCCCACCTTTCAATTGTTACAGAATTTCTTCCCAGAGGTAGCTTGTACAGGTTAATTCACCGTCCCAACAATCAATTAGATGAACGAAAGCGATTGAGGATGGCTCTTGATGCAGCTCGGGGAATGAACTATTTGCACAACTGCACGCCTGTTGTTGTACATCGTGATTTGAAGTCCCCAAATCTACTTGTTGATAAAAATTGGGTTGTGAAGGTATGCGATTTTGGTTTATCAAAAATGAAGCATAGCACATTTCTTTCTTCAAGGTCAACTGCTGGAACCGCTGAGTGGATGGCTCCAGAAGTGCTGAGAAATGAACCTTCCGATGAAAAGTGTGACGTTTATAGTTATGGAGTCATACTATGGGAGCTTTCTACAATGCAACAGCCATGGGGAGGAATGAACCCAATGCAAGTTGTTGGTGCTGTTGGCTTTCAGCATCGCCGTCTTGACATCCCAGACAATTTGGATCCTGCCATTGCTGACATTATTAGGAAATGCTGGCAAACAGATCCAAGATTAAGACCTTCATTTGCCGAGATTATGGCTGCACTAAAGCCGCTGCAAAAGCCATTGTCGAGTTCTCAAGTACCGAGACCAAATGCTCCTGCAGGTAGTGGTCGTGACAAGGCTAGATTATTGCAAGTCACCGAAGACCCATCAGGCTAG | 3036 | 45.52 | MKNLLKKFHIMSSGQSDDVAEGSTSSRSNKVMEVSSPDKLPSRSRPTHFSSEHKPFSGISGWLNSVTNRRSPSPPSSADPTAGEIMEPSDSVSSRDAAMDTSRHDSGSSNSRDPDIEEEYQIQLALEMSAREDPEAAQIEAVKQISLGSCDPDNTPAEVIAFRYWNYNSLSYDDKILDGFYDLYGVFTRSTSERMPSLVDLQGAPMSDSVTWEAVLINKAADANLLKLEQTALEMAIKMQTESPISVNHYLVRKLAALVSDHMGGPVGDPEKMLRKWRNLSYSLKATLGSMVLPLGSLTVGLARHRALLFKFLADGVGIPCRLVKGPQYTGSDDVAMNFVKIDDGREYIVDLMADPGALIPADVAGSHVEYDGSPFSASPVSRDVDSSQAASSSSGVGSSLEGNSDFGISDRKPKARNLSATKEYDSPNIDKVPSRDFASKSNYPGMHTRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTEAYPDQIDVIVESKSPTEDKDQSRKLPGICESADKNDPRLSNFLPPLPQPRLHSRASPTHGQQLYIKPLEFNLSLDSREAGGQPIPLPFEVTPVKYGRNVPVAAAAAAAAAVVASSMVVAAAKSSDANLEIPVAAAATATAAAVVATTAAVNKQYEQVEADAALYELRGSGDREHDACGDNSEGERISDRSAGNESTKSDITLDDVAECEIPWEEISLGERIGLGSYGEVYRGDWHGTEVAVKRFLDQDISGESLEEFKSEVRIMKRLRHPNVVLFMGAVTRAPHLSIVTEFLPRGSLYRLIHRPNNQLDERKRLRMALDAARGMNYLHNCTPVVVHRDLKSPNLLVDKNWVVKVCDFGLSKMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSYGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLDIPDNLDPAIADIIRKCWQTDPRLRPSFAEIMAALKPLQKPLSSSQVPRPNAPAGSGRDKARLLQVTEDPSG* | 1012 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4485111 | 4496170 | + | CsaV3_1G007070.1 | Csa01g00707 | 515204 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 676 | 705 | - | - | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 520 | 538 | - | - | |
Csa01g00707 | 1011 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 841 | 853 | IPR008271 | GO:0004672|GO:0006468 | |
Csa01g00707 | 1011 | ProSiteProfiles | Protein kinase domain profile. | 722 | 978 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 51 | 78 | - | - | |
Csa01g00707 | 1011 | SMART | serkin_6 | 722 | 977 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 97 | 116 | - | - | |
Csa01g00707 | 1011 | PANTHER | MAP KINASE KINASE KINASE-LIKE PROTEIN | 1 | 1009 | - | - | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 978 | 1011 | - | - | |
Csa01g00707 | 1011 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 157 | 360 | - | - | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 520 | 547 | - | - | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 1 | 116 | - | - | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 16 | 44 | - | - | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 377 | 461 | - | - | |
Csa01g00707 | 1011 | Gene3D | Transferase(Phosphotransferase) domain 1 | 801 | 985 | - | - | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 380 | 406 | - | - | |
Csa01g00707 | 1011 | Pfam | Protein tyrosine and serine/threonine kinase | 723 | 974 | IPR001245 | GO:0004672|GO:0006468 | |
Csa01g00707 | 1011 | SUPERFAMILY | Protein kinase-like (PK-like) | 705 | 972 | IPR011009 | - | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 676 | 699 | - | - | |
Csa01g00707 | 1011 | MobiDBLite | consensus disorder prediction | 442 | 458 | - | - | |
Csa01g00707 | 1011 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 1009 | - | - | |
Csa01g00707 | 1011 | ProSitePatterns | Protein kinases ATP-binding region signature. | 728 | 749 | IPR017441 | GO:0005524 | |
Csa01g00707 | 1011 | Gene3D | Phosphorylase Kinase; domain 1 | 715 | 799 | - | - | |
Csa01g00707 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 796 | 809 | IPR001245 | GO:0004672|GO:0006468 | |
Csa01g00707 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 835 | 853 | IPR001245 | GO:0004672|GO:0006468 | |
Csa01g00707 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 882 | 892 | IPR001245 | GO:0004672|GO:0006468 | |
Csa01g00707 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 901 | 923 | IPR001245 | GO:0004672|GO:0006468 | |
Csa01g00707 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 945 | 967 | IPR001245 | GO:0004672|GO:0006468 | |
Csa01g00707 | 1011 | CDD | STKc_MAP3K-like | 728 | 974 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g00707 | Csa-Chr1:4485111 | Csa04g02535 | Csa-Chr4:25059511 | 5.67E-77 | dispersed | |
Csa01g00707 | Csa-Chr1:4485111 | Csa06g02656 | Csa-Chr6:23385603 | 1.59E-36 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77759 | PF07714 | PK_Tyr_Ser-Thr | 5.40E-67 | CL0016 | Csa | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g00707 | - | - | csv:101209024 | 1930.22 |