Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00788 ATGGCGCCGGTTTTATCTCGGTTACTTCTCCGACGGAATGTTCACACACCATTTCTTCGCACCTCCACCACCGCATTTAACTTTTTCAGAACAATTCATTCTACGGTTTTCTCCACTGTAGAAGTGGACCAAATATCAGGTTCTAAGCCAGGAGATGTTCTCAACTTGGTGCAGGGTAAATGGATTGGATCTTCCGGTTGGAATACTATTGTAGATCCTCTAAATGGAGAACCATTTATTAGAGTTGCCGAAGTCAACGAAACAGAGATTCAGCCATTTGTGAAGAGTCTAACCAAATGCCCCAAGCATGGCTTACACAATCCTTTCAAATCGCCTGAGAGATATTTGTTGTTCGGAGATGTATCTTCCAAGTCTGCCGACGTGCTTTCCAAGCCAGAGGTGACTGACTTCTTTGCAAGGCTGATTCAAAGAGTTTCTCCAAAAAGTTATCAGCAAGCTTGTGCTGAAGTAAATGTTACTGTTAAATTTCTACGGAACTTCTCTGGCGATCAGGTTCGCTTCCTAGCAAGGTCCTTTGCAGTACCTGGAGATCATCTTGGACAACAAAGTCATGGTTTCCGTTGGCCTTATGGTCCCGTTGCAATTATCACTCCTTTCAACTTTCCATTAGAAATTCCTGTACTTCAGTTGATGGGTGCACTTTACATGGGCAACAAACCCGTTTTAAAAGTTGATAGCAAGGTTAGCATTGTTATGGAGCAAATGATTCGATTGCTTCACCATTGTGGACTACCTCTAGAAGATTTAGATTTTATAAATTGTGATGGGAAGACCATGAACAAGTTTTTGATGGAGGCAAATCCATCCATGACTCTTTTCACCGGTAGCTCAAGGGTGGCAGATAAGTTAGCTGTTGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTTGATTGGAAAGTCTTAGGACCAGATGTTCGAGAGGAAGACTATGTTGCATGGGTTTGTGATCAAGATGCTTATGCTTGTAGTGGCCAAAAGTGTTCAGCACAGTCGATACTGTTTATGCATGAGAATTGGTCAACAACTTCGCTTATTTCGAAGATAAAGGATCTTGCAGAGAGAAGAAATTTGACCGATTTAACAATTGGCCCAGTTCTTACATTGACAACGGAAGCGATACTAGATCACTTGAATAAATTGATCAAGATACCAGGGGCAAAGTTGCTCTTTGGAGGCGAACCTCTAAAAAACCATTCTATTCCACCCGTATATGGCGCTATAAAACCCACTGCATTATATATTCCACTTGAAGAAATGATGAAAGATGAGAATTATGAACTCGTGACTAAGGAAATTTTTGGACCATTCCAGATTGTTACGGAATACAAGAGAGATCAACTTTCGGTTGTGTTGGATGCTCTTGAGCGAATGCATGCTCATCTAACTGCTGCTGTTGTTTCAAATGACCCTCTTTTTTTGCAGGAAGTTATTGGCAACACTGTGAATGGAACGACATACGTAGGTTTAAGAGCTAGAACAACGGGAGCTCCACAAAACCATTGGTTTGGACCCGCAGGAGACCCTAGAGGTGCAGGTATTGGAACCCCGGAAGCCATCAAACTCGTATGGTCTTGCCATAGAGAGATTATATATGATATTGGCCCATTGCCCTCGCATTGGACTGTTCCATCGTCAACTTGA 1668 42.33 MAPVLSRLLLRRNVHTPFLRTSTTAFNFFRTIHSTVFSTVEVDQISGSKPGDVLNLVQGKWIGSSGWNTIVDPLNGEPFIRVAEVNETEIQPFVKSLTKCPKHGLHNPFKSPERYLLFGDVSSKSADVLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTVKFLRNFSGDQVRFLARSFAVPGDHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNKFLMEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKVLGPDVREEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSTTSLISKIKDLAERRNLTDLTIGPVLTLTTEAILDHLNKLIKIPGAKLLFGGEPLKNHSIPPVYGAIKPTALYIPLEEMMKDENYELVTKEIFGPFQIVTEYKRDQLSVVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYVGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPSHWTVPSST* 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4990343 4996180 + CsaV3_1G007880.1 Csa01g00788 515285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00788 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Csa01g00788 555 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Csa01g00788 555 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 26 554 - -
Csa01g00788 555 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 26 554 IPR044638 GO:0004029
Csa01g00788 555 Pfam Aldehyde dehydrogenase family 71 506 IPR015590 GO:0016491
Csa01g00788 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 52 306 IPR016162 GO:0016491
Csa01g00788 555 SUPERFAMILY ALDH-like 55 523 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00788 Csa-Chr1:4990343 Csa01g00160 Csa-Chr1:1036221 1.65E-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00788 K00294 - csv:101214440 1129.39