Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g01075 ATGTCTTGTTCGAATCTGACTATGTGGGTGTCTTCAAAACCCACCGTTTCTGATGCATCCTCCCTGTCTTTCCGCTCTTTTTTGAGCCCTTTTCAACTTCCTTCCCAGAATTCAACCCCTGCTCGATCATGGTCAGTTACTCCAATCCATTGCGGTCTTCGGGAACTCCGAGACCGTATCGATTCGGTGAAGAACACCCAGAAGATCACTGAAGCTATGAAGCTTGTTGCTGCTGCCAAAGTCCGTAGAGCTCAAGAAGCTGTTGTTAATGGAAGACCCTTCTCTGAAGCCTTAGTTGAAGTCCTTTACAACATCAATGAGCAACTTCAAACAGAAGATGTTGATGTTCCTTTAACCAAAGTAAGACCTGTTAAGAAAGTTGCATTAGTTGTTGTCACCGGTGATAGAGGACTTTGTGGTGGTTTCAACAATAGCATCATTAAGAAAGCTGAAGCTAGAATAAAGGAATTGAAGGCCCTTGGTCTTGATTACACTGTCATTAGTGTTGGAAAGAAGGGTAATTCTTATTTCCTTCGCCGACCGTACATTCCTGTCGATAAGTTCCTTGAAGGTGGTACTCTTCCCACAGCTAAAGAAGCTCAAGCGATAGCTGATGATGTTTTTTCACTCTTTGTTAGTGAGGAAGTTGATAAAGTAGAGCTTTTGTATACAAAATTCGTGTCATTGGTAAAATCTGATCCTGTAATTCATACTCTTCTTCCTCTATCACCAAAAGGTGAGATCTGTGATATAAATGGAGTCTGTGTAGATGCTGCAGAAGATGAGTTTTTCAGGTTGACAACAAAGGAAGGGAAATTGACAGTAGAAAGGGATTCAGTGAGGACAAGCACATCAGATTTTTCACCAATTTTGGAGTTCGAGCAAGACCCAGTTCAGATCTTGGATGCTTTATTGCCTTTGTATTTGAACAGCCAGATTTTGAGGGCATTGCAAGAGTCATTGGCCAGTGAACTTGCTGCTAGAATGAGTGCTATGAGTAATGCAACCGATAATGCTTCTGAGCTGAAGAGAACTCTGTCTATTGTGTATAATAGACAGCGCCAAGCTAAGATTACTGGAGAAATCTTGGAGATTGTTGCTGGTGCTAATGCCTTGACTTAA 1122 41.8 MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSTPARSWSVTPIHCGLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARIKELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAKITGEILEIVAGANALT* 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6678624 6679745 - CsaV3_1G010750.1 Csa01g01075 515572

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g01075 373 Gene3D - 120 243 - -
Csa01g01075 373 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 372 - -
Csa01g01075 373 PANTHER ATP SYNTHASE GAMMA CHAIN 1 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Csa01g01075 373 ProSitePatterns ATP synthase gamma subunit signature. 358 371 IPR023632 -
Csa01g01075 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 269 372 - -
Csa01g01075 373 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 52 372 IPR035968 GO:0015986|GO:0045261|GO:0046933
Csa01g01075 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 52 119 - -
Csa01g01075 373 PRINTS ATP synthase gamma subunit signature 124 143 IPR000131 GO:0015986|GO:0045261|GO:0046933
Csa01g01075 373 PRINTS ATP synthase gamma subunit signature 217 234 IPR000131 GO:0015986|GO:0045261|GO:0046933
Csa01g01075 373 PRINTS ATP synthase gamma subunit signature 319 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Csa01g01075 373 PRINTS ATP synthase gamma subunit signature 350 371 IPR000131 GO:0015986|GO:0045261|GO:0046933
Csa01g01075 373 CDD F1-ATPase_gamma 53 369 IPR000131 GO:0015986|GO:0045261|GO:0046933
Csa01g01075 373 Hamap ATP synthase gamma chain [atpG]. 50 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Csa01g01075 373 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 52 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Csa01g01075 373 Pfam ATP synthase 53 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g01075 K02115 ATPF1G, atpG; F-type H+-transporting ATPase subunit gamma - csv:101214408 688.723
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Csa01g01075 Csa06g03519 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00596 Csa-Chr1:3840589 Csa01g01075 Csa-Chr1:6678624 4.25E-28 transposed
Csa03g00512 Csa-Chr3:4279414 Csa01g01075 Csa-Chr1:6678624 3.19E-156 transposed
Csa01g01075 Csa-Chr1:6678624 Csa06g03519 Csa-Chr6:28692844 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g86 . . . Bda09g01616 . . . . Cmo13g00771 . . . . . Sed10g0607 . Cpe10g00784 Bhi03g00577 Tan03g2312 Cmetu04g1298 . Hepe04g1768 . . . . . . . . . Cone6ag0055 Cone9ag0067 . . Lsi01g00426 Csa06g03519 Chy12g01065 Cme08g00402 . . . . . . . . Sed08g2366 Cmo03g00560 . Cma13g00740 . Car13g00599 . . Cpe20g00363 Bhi08g01833 Tan05g3088 Cmetu12g1125 Lac10g0684 Hepe07g1109 . . Cla03g00441 Cam03g0466 Cec03g0453 Cco03g0463 Clacu03g0464 Cmu03g1071 Cre03g0757 . Csa01g01075 . Cme12g01491
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa02g00872 . 7 1193 Primary Pumps ATPases AT1G13210 71.5 0.0e+00 1706.0
Csa05g02560 . 5 1183 Primary Pumps ATPases AT1G13210 70.0 0.0e+00 1657.1
Csa01g00639 . 6 1184 Primary Pumps ATPases AT1G13210 69.2 0.0e+00 1622.1
Csa01g00638 . 6 1184 Primary Pumps ATPases AT1G13210 69.2 0.0e+00 1617.8
Csa07g02379 . 12 1212 Primary Pumps ATPases AT1G13210 54.9 0.0e+00 1280.8
Csa07g02379 . 6 1225 Primary Pumps ATPases AT1G17500 74.1 0.0e+00 1793.1
Csa05g02560 . 3 1194 Primary Pumps ATPases AT1G17500 55.6 0.0e+00 1320.4
Csa02g00872 . 1 1196 Primary Pumps ATPases AT1G17500 55.4 0.0e+00 1318.1
Csa01g00639 . 1 1183 Primary Pumps ATPases AT1G17500 56.0 0.0e+00 1312.4
Csa01g00638 . 1 1183 Primary Pumps ATPases AT1G17500 55.8 0.0e+00 1308.9
Csa02g00872 . 7 1181 Primary Pumps ATPases AT1G26130 72.1 0.0e+00 1728.4
Csa05g02560 . 5 1190 Primary Pumps ATPases AT1G26130 71.2 0.0e+00 1691.8
Csa01g00639 . 3 1175 Primary Pumps ATPases AT1G26130 66.6 0.0e+00 1562.0
Csa01g00638 . 3 1175 Primary Pumps ATPases AT1G26130 66.4 0.0e+00 1558.5
Csa07g02379 . 12 1177 Primary Pumps ATPases AT1G26130 55.3 0.0e+00 1268.8
Csa07g02379 . 6 1227 Primary Pumps ATPases AT1G54280 73.7 0.0e+00 1778.1
Csa02g00872 . 9 1193 Primary Pumps ATPases AT1G54280 54.9 0.0e+00 1295.0
Csa05g02560 . 5 1191 Primary Pumps ATPases AT1G54280 55.5 0.0e+00 1295.0
Csa01g00638 . 8 1183 Primary Pumps ATPases AT1G54280 55.1 0.0e+00 1287.7
Csa01g00639 . 8 1183 Primary Pumps ATPases AT1G54280 54.9 0.0e+00 1286.2
Csa05g02389 . 20 1226 Primary Pumps ATPases AT1G59820 79.0 0.0e+00 1929.8
Csa02g00872 . 3 1192 Primary Pumps ATPases AT1G68710 71.7 0.0e+00 1759.2
Csa05g02560 . 1 1189 Primary Pumps ATPases AT1G68710 71.6 0.0e+00 1743.0
Csa01g00639 . 2 1192 Primary Pumps ATPases AT1G68710 67.1 0.0e+00 1633.6
Csa01g00638 . 2 1192 Primary Pumps ATPases AT1G68710 66.9 0.0e+00 1628.2
Csa07g02379 . 12 1215 Primary Pumps ATPases AT1G68710 54.6 0.0e+00 1288.1
Csa07g02379 . 6 1225 Primary Pumps ATPases AT1G72700 73.1 0.0e+00 1769.2
Csa05g02560 . 3 1194 Primary Pumps ATPases AT1G72700 55.9 0.0e+00 1327.4
Csa01g00639 . 1 1183 Primary Pumps ATPases AT1G72700 55.8 0.0e+00 1313.9
Csa02g00872 . 1 1196 Primary Pumps ATPases AT1G72700 55.1 0.0e+00 1312.0
Csa01g00638 . 1 1183 Primary Pumps ATPases AT1G72700 55.7 0.0e+00 1310.0
Csa07g02379 . 6 935 Primary Pumps ATPases AT3G13900 72.1 0.0e+00 1325.5
Csa02g00872 . 9 895 Primary Pumps ATPases AT3G13900 57.4 1.4e-297 1019.2
Csa01g00638 . 4 891 Primary Pumps ATPases AT3G13900 56.6 2.0e-296 1015.4
Csa05g02560 . 5 890 Primary Pumps ATPases AT3G13900 57.7 2.0e-296 1015.4
Csa01g00639 . 4 891 Primary Pumps ATPases AT3G13900 56.0 1.7e-295 1012.3
Csa02g00872 . 7 1193 Primary Pumps ATPases AT3G25610 72.0 0.0e+00 1733.0
Csa05g02560 . 5 1183 Primary Pumps ATPases AT3G25610 71.7 0.0e+00 1708.7
Csa01g00639 . 2 1184 Primary Pumps ATPases AT3G25610 68.9 0.0e+00 1640.2
Csa01g00638 . 2 1184 Primary Pumps ATPases AT3G25610 68.8 0.0e+00 1635.5
Csa07g02379 . 12 1213 Primary Pumps ATPases AT3G25610 55.7 0.0e+00 1295.8
Csa05g02560 . 192 1147 Primary Pumps ATPases AT3G27870 66.1 0.0e+00 1277.3
Csa01g00639 . 193 1147 Primary Pumps ATPases AT3G27870 64.9 0.0e+00 1248.8
Csa02g00872 . 194 1151 Primary Pumps ATPases AT3G27870 64.7 0.0e+00 1248.4
Csa01g00638 . 193 1147 Primary Pumps ATPases AT3G27870 64.6 0.0e+00 1243.0
Csa07g02379 . 202 1223 Primary Pumps ATPases AT3G27870 53.2 4.5e-309 1057.4
Csa04g01695 . 155 1290 Primary Pumps ATPases AT5G04930 57.1 0.0e+00 1239.9
Csa06g00451 . 59 637 Primary Pumps ATPases AT5G04930 69.7 7.0e-237 817.8
Csa06g00450 . 13 601 Primary Pumps ATPases AT5G04930 67.2 4.1e-221 765.4
Csa07g00483 . 1 1104 Primary Pumps ATPases AT5G44240 83.7 0.0e+00 1876.7
Csa04g02477 . 1 1021 Primary Pumps ATPases AT1G27770 80.7 0.0e+00 1622.8
Csa06g03028 . 1 1014 Primary Pumps ATPases AT1G27770 78.0 0.0e+00 1567.7
Csa03g03769 . 1 1014 Primary Pumps ATPases AT1G27770 63.1 0.0e+00 1243.4
Csa05g01391 . 1 911 Primary Pumps ATPases AT1G27770 63.6 0.0e+00 1151.3
Csa06g03028 . 1 1015 Primary Pumps ATPases AT4G37640 83.7 0.0e+00 1684.5
Csa04g02477 . 1 1017 Primary Pumps ATPases AT4G37640 77.8 0.0e+00 1570.8
Csa03g03769 . 1 1011 Primary Pumps ATPases AT4G37640 63.5 0.0e+00 1251.9
Csa05g01391 . 1 909 Primary Pumps ATPases AT4G37640 65.8 0.0e+00 1165.2
Csa03g03769 . 57 1030 Primary Pumps ATPases AT3G57330 71.9 0.0e+00 1373.6
Csa05g01391 . 1 929 Primary Pumps ATPases AT3G57330 70.4 0.0e+00 1274.6
Csa04g02477 . 60 1019 Primary Pumps ATPases AT3G57330 63.5 0.0e+00 1178.3
Csa06g03028 . 60 1014 Primary Pumps ATPases AT3G57330 64.0 0.0e+00 1175.2
Csa03g03769 . 104 1030 Primary Pumps ATPases AT2G41560 72.4 0.0e+00 1329.3
Csa05g01391 . 1 929 Primary Pumps ATPases AT2G41560 70.1 0.0e+00 1276.2
Csa04g02477 . 111 1020 Primary Pumps ATPases AT2G41560 64.7 0.0e+00 1146.0
Csa06g03028 . 105 1014 Primary Pumps ATPases AT2G41560 64.0 0.0e+00 1121.7
Csa02g00680 . 130 1061 Primary Pumps ATPases AT2G41560 50.5 1.9e-245 845.9
Csa02g00680 . 2 1059 Primary Pumps ATPases AT5G57110 74.1 0.0e+00 1511.5
Csa07g02289 . 13 1073 Primary Pumps ATPases AT5G57110 68.7 0.0e+00 1419.4
Csa07g01678 . 74 1011 Primary Pumps ATPases AT5G57110 54.5 3.3e-289 991.5
Csa02g00321 . 93 1008 Primary Pumps ATPases AT5G57110 55.1 8.7e-282 966.8
Csa07g02289 . 6 1087 Primary Pumps ATPases AT3G21180 74.0 0.0e+00 1549.3
Csa02g00680 . 13 1075 Primary Pumps ATPases AT3G21180 70.7 0.0e+00 1461.0
Csa07g01678 . 72 1011 Primary Pumps ATPases AT3G21180 55.3 1.4e-282 969.5
Csa02g00321 . 88 1006 Primary Pumps ATPases AT3G21180 54.1 9.1e-271 930.2
Csa01g02737 . 6 393 Primary Pumps ATPases AT3G21180 55.9 1.2e-108 391.7
Csa02g00680 . 10 1074 Primary Pumps ATPases AT4G29900 73.4 0.0e+00 1524.2
Csa07g02289 . 15 1086 Primary Pumps ATPases AT4G29900 70.0 0.0e+00 1435.2
Csa07g01678 . 73 1011 Primary Pumps ATPases AT4G29900 55.6 5.8e-294 1007.3
Csa02g00321 . 98 1006 Primary Pumps ATPases AT4G29900 55.4 2.3e-279 958.7
Csa03g03769 . 21 1013 Primary Pumps ATPases AT4G29900 50.8 1.1e-257 886.7
Csa01g02737 . 26 387 Primary Pumps ATPases AT4G29900 51.2 1.1e-90 332.0
Csa07g01678 . 9 1011 Primary Pumps ATPases AT3G63380 67.1 0.0e+00 1308.5
Csa02g00321 . 30 1011 Primary Pumps ATPases AT3G63380 60.8 0.0e+00 1165.6
Csa02g00680 . 121 1060 Primary Pumps ATPases AT3G63380 55.3 1.1e-284 976.5
Csa07g02289 . 132 1088 Primary Pumps ATPases AT3G63380 54.7 6.8e-284 973.8
Csa07g01678 . 16 1012 Primary Pumps ATPases AT3G22910 64.3 0.0e+00 1245.3
Csa02g00321 . 31 1011 Primary Pumps ATPases AT3G22910 63.4 0.0e+00 1201.0
Csa02g00680 . 120 1060 Primary Pumps ATPases AT3G22910 56.3 5.3e-289 990.7
Csa07g02289 . 131 1075 Primary Pumps ATPases AT3G22910 55.8 1.7e-282 969.1
Csa02g00872 . 7 1193 Primary Pumps ATPases AT1G13210 71.5 0.0e+00 1706.0
Csa05g02560 . 5 1183 Primary Pumps ATPases AT1G13210 70.0 0.0e+00 1657.1
Csa01g00639 . 6 1184 Primary Pumps ATPases AT1G13210 69.2 0.0e+00 1622.1
Csa01g00638 . 6 1184 Primary Pumps ATPases AT1G13210 69.2 0.0e+00 1617.8
Csa07g02379 . 12 1212 Primary Pumps ATPases AT1G13210 54.9 0.0e+00 1280.8
Csa04g00175 . 3 922 Primary Pumps ATPases AT1G80660 86.2 0.0e+00 1586.6
Csa02g00645 . 1 928 Primary Pumps ATPases AT1G80660 83.2 0.0e+00 1558.9
Csa01g01854 CCT 3 919 Primary Pumps ATPases AT1G80660 84.0 0.0e+00 1555.4
Csa02g00252 CCT 5 918 Primary Pumps ATPases AT1G80660 84.8 0.0e+00 1551.6
Csa02g02323 . 1 926 Primary Pumps ATPases AT1G80660 83.5 0.0e+00 1551.6
Csa01g02165 . 1 927 Primary Pumps ATPases AT1G80660 81.6 0.0e+00 1531.2
Csa03g04401 . 10 923 Primary Pumps ATPases AT1G80660 81.1 0.0e+00 1483.0
Csa01g00798 CCT,ECH 2 927 Primary Pumps ATPases AT1G80660 79.7 0.0e+00 1469.9
Csa05g02967 . 2 927 Primary Pumps ATPases AT1G80660 78.6 0.0e+00 1458.0
Csa01g00210 CCT,ECH 5 958 Primary Pumps ATPases AT1G80660 76.9 0.0e+00 1440.2
Csa01g00798 CCT,ECH 6 948 Primary Pumps ATPases AT3G60330 76.3 0.0e+00 1431.0
Csa05g02967 . 6 957 Primary Pumps ATPases AT3G60330 75.5 0.0e+00 1416.7
Csa01g00210 CCT,ECH 9 988 Primary Pumps ATPases AT3G60330 73.9 0.0e+00 1412.9
Csa02g02323 . 10 956 Primary Pumps ATPases AT3G60330 73.6 0.0e+00 1375.1
Csa01g01854 CCT 1 949 Primary Pumps ATPases AT3G60330 73.4 0.0e+00 1366.3
Csa02g00645 . 9 955 Primary Pumps ATPases AT3G60330 72.9 0.0e+00 1361.3
Csa01g02165 . 6 954 Primary Pumps ATPases AT3G60330 72.5 0.0e+00 1359.7
Csa04g00175 . 1 952 Primary Pumps ATPases AT3G60330 72.1 0.0e+00 1349.7
Csa03g04401 . 7 953 Primary Pumps ATPases AT3G60330 71.8 0.0e+00 1343.9
Csa02g00252 CCT 1 919 Primary Pumps ATPases AT3G60330 72.5 0.0e+00 1323.1
Csa01g00798 CCT,ECH 1 957 Primary Pumps ATPases AT5G62670 92.5 0.0e+00 1734.9
Csa01g00210 CCT,ECH 5 988 Primary Pumps ATPases AT5G62670 88.8 0.0e+00 1705.3
Csa05g02967 . 1 957 Primary Pumps ATPases AT5G62670 89.9 0.0e+00 1696.8
Csa02g02323 . 3 956 Primary Pumps ATPases AT5G62670 81.9 0.0e+00 1526.9
Csa02g00645 . 9 955 Primary Pumps ATPases AT5G62670 81.4 0.0e+00 1514.6
Csa04g00175 . 6 952 Primary Pumps ATPases AT5G62670 80.9 0.0e+00 1511.5
Csa01g02165 . 7 954 Primary Pumps ATPases AT5G62670 80.7 0.0e+00 1509.6
Csa01g01854 CCT 1 949 Primary Pumps ATPases AT5G62670 80.0 0.0e+00 1499.2
Csa03g04401 . 7 953 Primary Pumps ATPases AT5G62670 78.8 0.0e+00 1454.9
Csa02g00252 CCT 6 919 Primary Pumps ATPases AT5G62670 79.4 0.0e+00 1447.2
Csa02g00645 . 10 955 Primary Pumps ATPases AT1G17260 72.7 0.0e+00 1354.7
Csa01g02165 . 5 954 Primary Pumps ATPases AT1G17260 71.4 0.0e+00 1336.2
Csa02g02323 . 4 956 Primary Pumps ATPases AT1G17260 71.2 0.0e+00 1332.8
Csa01g00798 CCT,ECH 13 957 Primary Pumps ATPases AT1G17260 72.3 0.0e+00 1328.9
Csa04g00175 . 12 952 Primary Pumps ATPases AT1G17260 71.4 0.0e+00 1321.2
Csa01g01854 CCT 7 949 Primary Pumps ATPases AT1G17260 71.2 0.0e+00 1314.7
Csa05g02967 . 13 957 Primary Pumps ATPases AT1G17260 71.3 0.0e+00 1311.6
Csa03g04401 . 14 953 Primary Pumps ATPases AT1G17260 70.6 0.0e+00 1302.0
Csa01g00210 CCT,ECH 1 988 Primary Pumps ATPases AT1G17260 68.4 0.0e+00 1296.2
Csa02g00252 CCT 7 919 Primary Pumps ATPases AT1G17260 71.6 0.0e+00 1285.0
Csa01g00798 CCT,ECH 6 957 Primary Pumps ATPases AT3G47950 92.6 0.0e+00 1729.9
Csa01g00210 CCT,ECH 9 988 Primary Pumps ATPases AT3G47950 89.5 0.0e+00 1707.2
Csa05g02967 . 3 957 Primary Pumps ATPases AT3G47950 89.8 0.0e+00 1687.9
Csa04g00175 . 6 952 Primary Pumps ATPases AT3G47950 81.0 0.0e+00 1515.0
Csa02g02323 . 10 956 Primary Pumps ATPases AT3G47950 81.3 0.0e+00 1511.9
Csa01g02165 . 7 954 Primary Pumps ATPases AT3G47950 80.4 0.0e+00 1508.4
Csa02g00645 . 9 955 Primary Pumps ATPases AT3G47950 80.9 0.0e+00 1507.3
Csa01g01854 CCT 6 949 Primary Pumps ATPases AT3G47950 80.4 0.0e+00 1499.6
Csa03g04401 . 7 953 Primary Pumps ATPases AT3G47950 78.7 0.0e+00 1456.4
Csa02g00252 CCT 6 919 Primary Pumps ATPases AT3G47950 79.3 0.0e+00 1442.9
Csa02g02323 . 268 956 Primary Pumps ATPases AT2G24520 87.5 0.0e+00 1195.3
Csa01g02165 . 265 954 Primary Pumps ATPases AT2G24520 85.4 0.0e+00 1185.6
Csa02g00645 . 267 955 Primary Pumps ATPases AT2G24520 86.1 0.0e+00 1184.5
Csa03g04401 . 265 953 Primary Pumps ATPases AT2G24520 82.3 0.0e+00 1117.8
Csa04g00175 . 264 952 Primary Pumps ATPases AT2G24520 80.3 0.0e+00 1114.4
Csa01g01854 CCT 264 949 Primary Pumps ATPases AT2G24520 80.1 0.0e+00 1102.4
Csa05g02967 . 266 957 Primary Pumps ATPases AT2G24520 78.1 2.1e-313 1071.2
Csa01g00798 CCT,ECH 266 957 Primary Pumps ATPases AT2G24520 78.6 1.3e-312 1068.5
Csa01g00210 CCT,ECH 269 988 Primary Pumps ATPases AT2G24520 76.0 1.2e-308 1055.4
Csa02g00252 CCT 264 921 Primary Pumps ATPases AT2G24520 78.8 1.1e-303 1038.9
Csa02g00645 . 6 955 Primary Pumps ATPases AT5G57350 86.5 0.0e+00 1629.4
Csa01g02165 . 6 954 Primary Pumps ATPases AT5G57350 84.8 0.0e+00 1608.6
Csa02g02323 . 7 956 Primary Pumps ATPases AT5G57350 84.2 0.0e+00 1597.4
Csa04g00175 . 5 952 Primary Pumps ATPases AT5G57350 82.6 0.0e+00 1577.4
Csa01g01854 CCT 5 949 Primary Pumps ATPases AT5G57350 83.0 0.0e+00 1566.6
Csa02g00252 CCT 5 919 Primary Pumps ATPases AT5G57350 82.8 0.0e+00 1525.0
Csa03g04401 . 7 953 Primary Pumps ATPases AT5G57350 80.6 0.0e+00 1522.3
Csa01g00798 CCT,ECH 8 957 Primary Pumps ATPases AT5G57350 79.6 0.0e+00 1507.3
Csa05g02967 . 8 957 Primary Pumps ATPases AT5G57350 79.3 0.0e+00 1501.9
Csa01g00210 CCT,ECH 11 988 Primary Pumps ATPases AT5G57350 77.1 0.0e+00 1486.1
Csa02g00645 . 8 955 Primary Pumps ATPases AT4G30190 85.3 0.0e+00 1630.2
Csa01g02165 . 6 954 Primary Pumps ATPases AT4G30190 83.8 0.0e+00 1603.2
Csa02g02323 . 9 956 Primary Pumps ATPases AT4G30190 83.1 0.0e+00 1592.4
Csa01g01854 CCT 5 949 Primary Pumps ATPases AT4G30190 81.7 0.0e+00 1562.4
Csa04g00175 . 5 952 Primary Pumps ATPases AT4G30190 81.0 0.0e+00 1562.4
Csa03g04401 . 6 953 Primary Pumps ATPases AT4G30190 78.9 0.0e+00 1510.7
Csa02g00252 CCT 5 919 Primary Pumps ATPases AT4G30190 81.2 0.0e+00 1507.7
Csa01g00798 CCT,ECH 8 957 Primary Pumps ATPases AT4G30190 78.0 0.0e+00 1486.1
Csa05g02967 . 8 957 Primary Pumps ATPases AT4G30190 77.9 0.0e+00 1484.5
Csa01g00210 CCT,ECH 11 988 Primary Pumps ATPases AT4G30190 76.1 0.0e+00 1464.5
Csa01g01854 CCT 3 949 Primary Pumps ATPases AT3G42640 86.2 0.0e+00 1622.8
Csa04g00175 . 2 952 Primary Pumps ATPases AT3G42640 84.3 0.0e+00 1594.7
Csa02g00645 . 5 955 Primary Pumps ATPases AT3G42640 83.4 0.0e+00 1578.1
Csa02g00252 CCT 2 919 Primary Pumps ATPases AT3G42640 85.8 0.0e+00 1569.7
Csa02g02323 . 11 956 Primary Pumps ATPases AT3G42640 83.7 0.0e+00 1568.5
Csa01g02165 . 1 954 Primary Pumps ATPases AT3G42640 81.8 0.0e+00 1554.7
Csa03g04401 . 1 953 Primary Pumps ATPases AT3G42640 79.6 0.0e+00 1511.9
Csa05g02967 . 11 957 Primary Pumps ATPases AT3G42640 79.8 0.0e+00 1498.4
Csa01g00798 CCT,ECH 11 957 Primary Pumps ATPases AT3G42640 79.8 0.0e+00 1493.8
Csa01g00210 CCT,ECH 14 988 Primary Pumps ATPases AT3G42640 77.4 0.0e+00 1478.0
Csa02g00645 . 70 955 Primary Pumps ATPases AT2G18960 87.7 0.0e+00 1534.6
Csa02g02323 . 71 956 Primary Pumps ATPases AT2G18960 86.7 0.0e+00 1520.8
Csa01g02165 . 68 954 Primary Pumps ATPases AT2G18960 86.6 0.0e+00 1513.0
Csa04g00175 . 67 952 Primary Pumps ATPases AT2G18960 84.3 0.0e+00 1491.5
Csa01g01854 CCT 67 949 Primary Pumps ATPases AT2G18960 83.6 0.0e+00 1470.3
Csa03g04401 . 68 953 Primary Pumps ATPases AT2G18960 82.4 0.0e+00 1435.6
Csa05g02967 . 69 957 Primary Pumps ATPases AT2G18960 80.6 0.0e+00 1416.4
Csa02g00252 CCT 67 919 Primary Pumps ATPases AT2G18960 83.6 0.0e+00 1413.7
Csa01g00798 CCT,ECH 69 957 Primary Pumps ATPases AT2G18960 80.3 0.0e+00 1412.5
Csa01g00210 CCT,ECH 72 988 Primary Pumps ATPases AT2G18960 78.1 0.0e+00 1392.1
Csa04g00175 . 3 952 Primary Pumps ATPases AT2G07560 85.5 0.0e+00 1615.5
Csa01g01854 CCT 3 949 Primary Pumps ATPases AT2G07560 84.7 0.0e+00 1600.1
Csa02g00645 . 7 955 Primary Pumps ATPases AT2G07560 83.0 0.0e+00 1583.5
Csa02g02323 . 8 956 Primary Pumps ATPases AT2G07560 83.0 0.0e+00 1568.1
Csa01g02165 . 1 954 Primary Pumps ATPases AT2G07560 81.3 0.0e+00 1565.1
Csa02g00252 CCT 4 919 Primary Pumps ATPases AT2G07560 84.5 0.0e+00 1543.5
Csa03g04401 . 1 953 Primary Pumps ATPases AT2G07560 79.3 0.0e+00 1513.4
Csa05g02967 . 11 957 Primary Pumps ATPases AT2G07560 78.9 0.0e+00 1488.0
Csa01g00798 CCT,ECH 11 957 Primary Pumps ATPases AT2G07560 78.7 0.0e+00 1478.4
Csa01g00210 CCT,ECH 14 988 Primary Pumps ATPases AT2G07560 76.2 0.0e+00 1458.4
Csa02g00645 . 5 854 Primary Pumps ATPases AT4G11730 60.5 6.8e-271 930.2
Csa01g02165 . 1 852 Primary Pumps ATPases AT4G11730 59.1 5.4e-268 920.6
Csa02g02323 . 9 862 Primary Pumps ATPases AT4G11730 59.2 1.6e-267 919.1
Csa02g00252 CCT 2 856 Primary Pumps ATPases AT4G11730 58.2 7.3e-265 910.2
Csa01g01854 CCT 5 855 Primary Pumps ATPases AT4G11730 57.5 3.7e-261 897.9
Csa04g00175 . 2 856 Primary Pumps ATPases AT4G11730 57.1 3.7e-261 897.9
Csa03g04401 . 16 856 Primary Pumps ATPases AT4G11730 57.9 5.1e-258 887.5
Csa01g00798 CCT,ECH 17 860 Primary Pumps ATPases AT4G11730 56.6 7.1e-252 867.1
Csa05g02967 . 17 860 Primary Pumps ATPases AT4G11730 55.7 8.6e-250 860.1
Csa01g00210 CCT,ECH 20 891 Primary Pumps ATPases AT4G11730 54.4 3.8e-245 844.7
Csa01g01806 . 5 631 Primary Pumps ATPases AT1G15690 87.4 2.0e-305 1044.6
Csa02g00493 . 4 621 Primary Pumps ATPases AT1G15690 78.0 3.3e-268 921.0
Csa07g02272 . 1 802 Primary Pumps ATPases AT1G16780 86.4 0.0e+00 1340.9
Csa07g02272 . 1 802 Primary Pumps ATPases AT1G78920 86.3 0.0e+00 1336.2
Csa05g02560 . 192 1147 Primary Pumps ATPases AT3G27870 66.1 0.0e+00 1277.3
Csa01g00639 . 193 1147 Primary Pumps ATPases AT3G27870 64.9 0.0e+00 1248.8
Csa02g00872 . 194 1151 Primary Pumps ATPases AT3G27870 64.7 0.0e+00 1248.4
Csa01g00638 . 193 1147 Primary Pumps ATPases AT3G27870 64.6 0.0e+00 1243.0
Csa07g02379 . 202 1223 Primary Pumps ATPases AT3G27870 53.2 4.5e-309 1057.4
Csa01g02172 . 163 544 Primary Pumps ATPases AT4G30120 67.2 5.0e-147 517.7
Csa02g00655 . 168 553 Primary Pumps ATPases AT4G30120 60.9 1.6e-132 469.5
Csa07g02379 . 6 935 Primary Pumps ATPases AT3G13900 72.1 0.0e+00 1325.5
Csa02g00872 . 9 895 Primary Pumps ATPases AT3G13900 57.4 1.4e-297 1019.2
Csa01g00638 . 4 891 Primary Pumps ATPases AT3G13900 56.6 2.0e-296 1015.4
Csa05g02560 . 5 890 Primary Pumps ATPases AT3G13900 57.7 2.0e-296 1015.4
Csa01g00639 . 4 891 Primary Pumps ATPases AT3G13900 56.0 1.7e-295 1012.3
Csa05g02389 . 20 1226 Primary Pumps ATPases AT1G59820 79.0 0.0e+00 1929.8
Csa07g02379 . 6 1225 Primary Pumps ATPases AT1G17500 74.1 0.0e+00 1793.1
Csa05g02560 . 3 1194 Primary Pumps ATPases AT1G17500 55.6 0.0e+00 1320.4
Csa02g00872 . 1 1196 Primary Pumps ATPases AT1G17500 55.4 0.0e+00 1318.1
Csa01g00639 . 1 1183 Primary Pumps ATPases AT1G17500 56.0 0.0e+00 1312.4
Csa01g00638 . 1 1183 Primary Pumps ATPases AT1G17500 55.8 0.0e+00 1308.9
Csa02g00872 . 7 1181 Primary Pumps ATPases AT1G26130 72.1 0.0e+00 1728.4
Csa05g02560 . 5 1190 Primary Pumps ATPases AT1G26130 71.2 0.0e+00 1691.8
Csa01g00639 . 3 1175 Primary Pumps ATPases AT1G26130 66.6 0.0e+00 1562.0
Csa01g00638 . 3 1175 Primary Pumps ATPases AT1G26130 66.4 0.0e+00 1558.5
Csa07g02379 . 12 1177 Primary Pumps ATPases AT1G26130 55.3 0.0e+00 1268.8
Csa04g01695 . 155 1290 Primary Pumps ATPases AT5G04930 57.1 0.0e+00 1239.9
Csa06g00451 . 59 637 Primary Pumps ATPases AT5G04930 69.7 7.0e-237 817.8
Csa06g00450 . 13 601 Primary Pumps ATPases AT5G04930 67.2 4.1e-221 765.4
Csa02g00872 . 3 1192 Primary Pumps ATPases AT1G68710 71.7 0.0e+00 1759.2
Csa05g02560 . 1 1189 Primary Pumps ATPases AT1G68710 71.6 0.0e+00 1743.0
Csa01g00639 . 2 1192 Primary Pumps ATPases AT1G68710 67.1 0.0e+00 1633.6
Csa01g00638 . 2 1192 Primary Pumps ATPases AT1G68710 66.9 0.0e+00 1628.2
Csa07g02379 . 12 1215 Primary Pumps ATPases AT1G68710 54.6 0.0e+00 1288.1
Csa02g00872 . 7 1193 Primary Pumps ATPases AT3G25610 72.0 0.0e+00 1733.0
Csa05g02560 . 5 1183 Primary Pumps ATPases AT3G25610 71.7 0.0e+00 1708.7
Csa01g00639 . 2 1184 Primary Pumps ATPases AT3G25610 68.9 0.0e+00 1640.2
Csa01g00638 . 2 1184 Primary Pumps ATPases AT3G25610 68.8 0.0e+00 1635.5
Csa07g02379 . 12 1213 Primary Pumps ATPases AT3G25610 55.7 0.0e+00 1295.8
Csa02g00872 . 7 1193 Primary Pumps ATPases AT1G13210 71.5 0.0e+00 1706.0
Csa05g02560 . 5 1183 Primary Pumps ATPases AT1G13210 70.0 0.0e+00 1657.1
Csa01g00639 . 6 1184 Primary Pumps ATPases AT1G13210 69.2 0.0e+00 1622.1
Csa01g00638 . 6 1184 Primary Pumps ATPases AT1G13210 69.2 0.0e+00 1617.8
Csa07g02379 . 12 1212 Primary Pumps ATPases AT1G13210 54.9 0.0e+00 1280.8
Csa07g00483 . 1 1104 Primary Pumps ATPases AT5G44240 83.7 0.0e+00 1876.7
Csa07g02379 . 6 1227 Primary Pumps ATPases AT1G54280 73.7 0.0e+00 1778.1
Csa02g00872 . 9 1193 Primary Pumps ATPases AT1G54280 54.9 0.0e+00 1295.0
Csa05g02560 . 5 1191 Primary Pumps ATPases AT1G54280 55.5 0.0e+00 1295.0
Csa01g00638 . 8 1183 Primary Pumps ATPases AT1G54280 55.1 0.0e+00 1287.7
Csa01g00639 . 8 1183 Primary Pumps ATPases AT1G54280 54.9 0.0e+00 1286.2
Csa07g02379 . 6 1225 Primary Pumps ATPases AT1G72700 73.1 0.0e+00 1769.2
Csa05g02560 . 3 1194 Primary Pumps ATPases AT1G72700 55.9 0.0e+00 1327.4
Csa01g00639 . 1 1183 Primary Pumps ATPases AT1G72700 55.8 0.0e+00 1313.9
Csa02g00872 . 1 1196 Primary Pumps ATPases AT1G72700 55.1 0.0e+00 1312.0
Csa01g00638 . 1 1183 Primary Pumps ATPases AT1G72700 55.7 0.0e+00 1310.0
Csa07g02289 . 6 1087 Primary Pumps ATPases AT3G21180 74.0 0.0e+00 1549.3
Csa02g00680 . 13 1075 Primary Pumps ATPases AT3G21180 70.7 0.0e+00 1461.0
Csa07g01678 . 72 1011 Primary Pumps ATPases AT3G21180 55.3 1.4e-282 969.5
Csa02g00321 . 88 1006 Primary Pumps ATPases AT3G21180 54.1 9.1e-271 930.2
Csa01g02737 . 6 393 Primary Pumps ATPases AT3G21180 55.9 1.2e-108 391.7
Csa06g03028 . 1 1015 Primary Pumps ATPases AT2G22950 82.2 0.0e+00 1641.7
Csa04g02477 . 1 1017 Primary Pumps ATPases AT2G22950 76.2 0.0e+00 1523.8
Csa03g03769 . 1 1011 Primary Pumps ATPases AT2G22950 62.8 0.0e+00 1233.0
Csa05g01391 . 1 909 Primary Pumps ATPases AT2G22950 64.9 0.0e+00 1138.3
Csa07g01678 . 16 1012 Primary Pumps ATPases AT3G22910 64.3 0.0e+00 1245.3
Csa02g00321 . 31 1011 Primary Pumps ATPases AT3G22910 63.4 0.0e+00 1201.0
Csa02g00680 . 120 1060 Primary Pumps ATPases AT3G22910 56.3 5.3e-289 990.7
Csa07g02289 . 131 1075 Primary Pumps ATPases AT3G22910 55.8 1.7e-282 969.1
Csa02g00680 . 10 1074 Primary Pumps ATPases AT4G29900 73.4 0.0e+00 1524.2
Csa07g02289 . 15 1086 Primary Pumps ATPases AT4G29900 70.0 0.0e+00 1435.2
Csa07g01678 . 73 1011 Primary Pumps ATPases AT4G29900 55.6 5.8e-294 1007.3
Csa02g00321 . 98 1006 Primary Pumps ATPases AT4G29900 55.4 2.3e-279 958.7
Csa03g03769 . 21 1013 Primary Pumps ATPases AT4G29900 50.8 1.1e-257 886.7
Csa01g02737 . 26 387 Primary Pumps ATPases AT4G29900 51.2 1.1e-90 332.0
Csa04g02477 . 1 1021 Primary Pumps ATPases AT1G27770 80.7 0.0e+00 1622.8
Csa06g03028 . 1 1014 Primary Pumps ATPases AT1G27770 78.0 0.0e+00 1567.7
Csa03g03769 . 1 1014 Primary Pumps ATPases AT1G27770 63.1 0.0e+00 1243.4
Csa05g01391 . 1 911 Primary Pumps ATPases AT1G27770 63.6 0.0e+00 1151.3
Csa02g00680 . 2 1059 Primary Pumps ATPases AT5G57110 74.1 0.0e+00 1511.5
Csa07g02289 . 13 1073 Primary Pumps ATPases AT5G57110 68.7 0.0e+00 1419.4
Csa07g01678 . 74 1011 Primary Pumps ATPases AT5G57110 54.5 3.3e-289 991.5
Csa02g00321 . 93 1008 Primary Pumps ATPases AT5G57110 55.1 8.7e-282 966.8
Csa07g01678 . 9 1011 Primary Pumps ATPases AT3G63380 67.1 0.0e+00 1308.5
Csa02g00321 . 30 1011 Primary Pumps ATPases AT3G63380 60.8 0.0e+00 1165.6
Csa02g00680 . 121 1060 Primary Pumps ATPases AT3G63380 55.3 1.1e-284 976.5
Csa07g02289 . 132 1088 Primary Pumps ATPases AT3G63380 54.7 6.8e-284 973.8
Csa06g03028 . 1 1015 Primary Pumps ATPases AT4G37640 83.7 0.0e+00 1684.5
Csa04g02477 . 1 1017 Primary Pumps ATPases AT4G37640 77.8 0.0e+00 1570.8
Csa03g03769 . 1 1011 Primary Pumps ATPases AT4G37640 63.5 0.0e+00 1251.9
Csa05g01391 . 1 909 Primary Pumps ATPases AT4G37640 65.8 0.0e+00 1165.2
Csa03g03769 . 104 1030 Primary Pumps ATPases AT2G41560 72.4 0.0e+00 1329.3
Csa05g01391 . 1 929 Primary Pumps ATPases AT2G41560 70.1 0.0e+00 1276.2
Csa04g02477 . 111 1020 Primary Pumps ATPases AT2G41560 64.7 0.0e+00 1146.0
Csa06g03028 . 105 1014 Primary Pumps ATPases AT2G41560 64.0 0.0e+00 1121.7
Csa02g00680 . 130 1061 Primary Pumps ATPases AT2G41560 50.5 1.9e-245 845.9
Csa03g03769 . 57 1030 Primary Pumps ATPases AT3G57330 71.9 0.0e+00 1373.6
Csa05g01391 . 1 929 Primary Pumps ATPases AT3G57330 70.4 0.0e+00 1274.6
Csa04g02477 . 60 1019 Primary Pumps ATPases AT3G57330 63.5 0.0e+00 1178.3
Csa06g03028 . 60 1014 Primary Pumps ATPases AT3G57330 64.0 0.0e+00 1175.2
Csa01g02172 . 14 710 Primary Pumps ATPases AT4G30110 69.2 2.2e-276 948.7
Csa02g00655 . 17 816 Primary Pumps ATPases AT4G30110 59.2 1.7e-268 922.5
Csa01g02172 . 14 704 Primary Pumps ATPases AT2G19110 67.7 2.4e-277 952.2
Csa02g00655 . 15 729 Primary Pumps ATPases AT2G19110 65.9 2.7e-268 922.2
Csa06g03896 . 1 1008 Primary Pumps ATPases AT5G44790 74.0 0.0e+00 1432.5
Csa04g01102 . 1 981 Primary Pumps ATPases AT1G63440 72.6 0.0e+00 1379.8
Csa05g00291 . 34 966 Primary Pumps ATPases AT1G63440 69.5 0.0e+00 1275.8
Csa02g01427 . 24 911 Primary Pumps ATPases AT1G63440 52.2 2.0e-248 855.9
Csa02g02791 . 104 815 Primary Pumps ATPases AT4G37270 76.7 1.2e-312 1068.9
Csa02g00356 . 1 1193 Primary Pumps ATPases AT5G23630 78.3 0.0e+00 1848.2
Csa03g01047 . 1 201 Primary Pumps ATPases AT5G47030 71.4 5.4e-76 280.8
Csa01g01075 CCT 7 372 Primary Pumps ATPases AT1G15700 68.7 1.4e-125 446.4
Csa06g03519 CCT 9 370 Primary Pumps ATPases AT1G15700 66.1 3.6e-121 431.8
Csa03g00512 . 22 349 Primary Pumps ATPases AT1G15700 61.1 1.1e-101 367.1
Csa06g00274 . 1 241 Primary Pumps ATPases AT4G09650 62.4 5.0e-73 271.2
Csa07g02019 . 107 250 Primary Pumps ATPases AT5G13450 64.6 1.5e-48 189.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002786 1 2 1 1 1 2 2 2 2 2 2 2 3 2 2 2 2 5 1 2 2 2 2 2 1 2 2 2 2 0 56
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa01g01075 Csa_Chr01 FPKM 10.440705 14.168485 6.178954 5.47121 26.713324 27.206602 20.64942 0.437786 0.563282 0.2299