Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g01265 | ATGCCTGTCCCTTTTTCTCTTCTCTGTTTTCTCACTCTGCTTCTCATTTCCTACACACCATCAAAATGTGCCAATGCAAAACCACCACCACCTAAACAAGCCCCCGCCCGCCGCCACCGCCTCCTCTCCGTCGACTACTATAACAAAACATGCCCTCACCTCGACCAGCTCGTCTCCTCAATCACTACCCAACAGTTCAAAGACGCACCAGTCTCAGCTCCAGCAACACTCCGCCTCTTCTTCCATGATTGCTTTGTAGAAGGTTGTGATGGGTCGATTCTGATATCAACAAAGCCAGGCAGCAAAGTGGCGGCGGAAAAGGATGCAGTGGACAATAAAGGGCTGAGACCTGAGGCGTTTGAAAGCATCAAGAAAGCAAAGGCGTTGGTTGAGAGCAAATGCCCTGGCGTTGTGTCTTGTGCTGACATCCTAGCAATCGCAGCCAGAGATTTTGTCCATTTGGCAGGAGGGCCGTATTACCCGGTGAAGAAGGGACGATGGGACGGGAAGATCTCCATGGCGTCCAGAATAGGTTCCAATCTACCACGAGCAAATTCCACCGTCGATCAACTTCTCAAACTCTTCAATTCCAAAGGTCTATCGGCCGATGATCTTGTCGTCCTCTCCGGTGCGCATACGATCGGATTTGCACACTGCGAGCACTTTACGAACCGTCTCTACGACTACAGAGGCACGAAGCAACCTGATCCAGCGATCGACGGGAGACTGCTGAAGGAGCTGAAAATGTCGTGCCCCAGGTACGGGGGAAATACAGATATAGTGGCGCCATTCGATGTAACGACGCCGTTTGTGTTTGATCATGCGTACTACGGAAATTTGGAAGGGAAATTGGGATTGTTGGCTACGGATCAAGGTCTGGTTTCGGATGCGAGGATGAAGACGATGGTGCAGGGTTTGGCGAAGGATAAGCAGAAGTTTTTTCAAGCTTTTGCGGCGGCGATGGACAAAATGGGATCGATTGGTGTGAAGAGAGGACGAAGACATGGAGAGCGAAGGACGGATTGTAGCATTCACCAGAGTTGA | 1044 | 50.86 | MPVPFSLLCFLTLLLISYTPSKCANAKPPPPKQAPARRHRLLSVDYYNKTCPHLDQLVSSITTQQFKDAPVSAPATLRLFFHDCFVEGCDGSILISTKPGSKVAAEKDAVDNKGLRPEAFESIKKAKALVESKCPGVVSCADILAIAARDFVHLAGGPYYPVKKGRWDGKISMASRIGSNLPRANSTVDQLLKLFNSKGLSADDLVVLSGAHTIGFAHCEHFTNRLYDYRGTKQPDPAIDGRLLKELKMSCPRYGGNTDIVAPFDVTTPFVFDHAYYGNLEGKLGLLATDQGLVSDARMKTMVQGLAKDKQKFFQAFAAAMDKMGSIGVKRGRRHGERRTDCSIHQS* | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7902328 | 7905670 | - | CsaV3_1G012650.1 | Csa01g01265 | 515762 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g01265 | 347 | PANTHER | PEROXIDASE 25-RELATED | 31 | 342 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Plant peroxidase signature | 51 | 70 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Plant peroxidase signature | 75 | 95 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Plant peroxidase signature | 118 | 131 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Plant peroxidase signature | 137 | 147 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Plant peroxidase signature | 156 | 171 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Plant peroxidase signature | 203 | 215 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Plant peroxidase signature | 263 | 278 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Plant peroxidase signature | 279 | 296 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Plant peroxidase signature | 319 | 332 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | Pfam | Peroxidase | 62 | 308 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | Gene3D | Peroxidase, domain 2 | 182 | 324 | - | - | |
Csa01g01265 | 347 | Gene3D | - | 45 | 344 | - | - | |
Csa01g01265 | 347 | CDD | secretory_peroxidase | 42 | 343 | IPR033905 | GO:0004601|GO:0042744 | |
Csa01g01265 | 347 | ProSiteProfiles | Plant heme peroxidase family profile. | 41 | 346 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PANTHER | PEROXIDASE 19 | 31 | 342 | - | - | |
Csa01g01265 | 347 | ProSitePatterns | Peroxidases active site signature. | 73 | 84 | IPR019794 | GO:0004601 | |
Csa01g01265 | 347 | SUPERFAMILY | Heme-dependent peroxidases | 42 | 344 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 204 | 214 | IPR019793 | - | |
Csa01g01265 | 347 | PRINTS | Haem peroxidase superfamily signature | 73 | 87 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Haem peroxidase superfamily signature | 138 | 155 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Haem peroxidase superfamily signature | 156 | 168 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Haem peroxidase superfamily signature | 204 | 219 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g01265 | 347 | PRINTS | Haem peroxidase superfamily signature | 265 | 280 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g01265 | Csa-Chr1:7902328 | Csa02g02592 | Csa-Chr2:22580320 | 1.72E-89 | dispersed | |
Csa01g01265 | Csa-Chr1:7902328 | Csa01g00826 | Csa-Chr1:5207608 | 1.65E-88 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g01265 | K00430 | - | csv:101216263 | 669.848 |