Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g01265 ATGCCTGTCCCTTTTTCTCTTCTCTGTTTTCTCACTCTGCTTCTCATTTCCTACACACCATCAAAATGTGCCAATGCAAAACCACCACCACCTAAACAAGCCCCCGCCCGCCGCCACCGCCTCCTCTCCGTCGACTACTATAACAAAACATGCCCTCACCTCGACCAGCTCGTCTCCTCAATCACTACCCAACAGTTCAAAGACGCACCAGTCTCAGCTCCAGCAACACTCCGCCTCTTCTTCCATGATTGCTTTGTAGAAGGTTGTGATGGGTCGATTCTGATATCAACAAAGCCAGGCAGCAAAGTGGCGGCGGAAAAGGATGCAGTGGACAATAAAGGGCTGAGACCTGAGGCGTTTGAAAGCATCAAGAAAGCAAAGGCGTTGGTTGAGAGCAAATGCCCTGGCGTTGTGTCTTGTGCTGACATCCTAGCAATCGCAGCCAGAGATTTTGTCCATTTGGCAGGAGGGCCGTATTACCCGGTGAAGAAGGGACGATGGGACGGGAAGATCTCCATGGCGTCCAGAATAGGTTCCAATCTACCACGAGCAAATTCCACCGTCGATCAACTTCTCAAACTCTTCAATTCCAAAGGTCTATCGGCCGATGATCTTGTCGTCCTCTCCGGTGCGCATACGATCGGATTTGCACACTGCGAGCACTTTACGAACCGTCTCTACGACTACAGAGGCACGAAGCAACCTGATCCAGCGATCGACGGGAGACTGCTGAAGGAGCTGAAAATGTCGTGCCCCAGGTACGGGGGAAATACAGATATAGTGGCGCCATTCGATGTAACGACGCCGTTTGTGTTTGATCATGCGTACTACGGAAATTTGGAAGGGAAATTGGGATTGTTGGCTACGGATCAAGGTCTGGTTTCGGATGCGAGGATGAAGACGATGGTGCAGGGTTTGGCGAAGGATAAGCAGAAGTTTTTTCAAGCTTTTGCGGCGGCGATGGACAAAATGGGATCGATTGGTGTGAAGAGAGGACGAAGACATGGAGAGCGAAGGACGGATTGTAGCATTCACCAGAGTTGA 1044 50.86 MPVPFSLLCFLTLLLISYTPSKCANAKPPPPKQAPARRHRLLSVDYYNKTCPHLDQLVSSITTQQFKDAPVSAPATLRLFFHDCFVEGCDGSILISTKPGSKVAAEKDAVDNKGLRPEAFESIKKAKALVESKCPGVVSCADILAIAARDFVHLAGGPYYPVKKGRWDGKISMASRIGSNLPRANSTVDQLLKLFNSKGLSADDLVVLSGAHTIGFAHCEHFTNRLYDYRGTKQPDPAIDGRLLKELKMSCPRYGGNTDIVAPFDVTTPFVFDHAYYGNLEGKLGLLATDQGLVSDARMKTMVQGLAKDKQKFFQAFAAAMDKMGSIGVKRGRRHGERRTDCSIHQS* 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7902328 7905670 - CsaV3_1G012650.1 Csa01g01265 515762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g01265 347 PANTHER PEROXIDASE 25-RELATED 31 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 Pfam Peroxidase 62 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 Gene3D Peroxidase, domain 2 182 324 - -
Csa01g01265 347 Gene3D - 45 344 - -
Csa01g01265 347 CDD secretory_peroxidase 42 343 IPR033905 GO:0004601|GO:0042744
Csa01g01265 347 ProSiteProfiles Plant heme peroxidase family profile. 41 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PANTHER PEROXIDASE 19 31 342 - -
Csa01g01265 347 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Csa01g01265 347 SUPERFAMILY Heme-dependent peroxidases 42 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Csa01g01265 347 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g01265 347 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01265 Csa-Chr1:7902328 Csa02g02592 Csa-Chr2:22580320 1.72E-89 dispersed
Csa01g01265 Csa-Chr1:7902328 Csa01g00826 Csa-Chr1:5207608 1.65E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g01265 K00430 - csv:101216263 669.848