Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g01298 ATGGCCGCCGCAGCCTTAGATCCTTCCTCTCTCCAATTCACCTCTACTTGGGCTGTAGCTGCTGTTTGTTTCTTCTTCATCTCCCTCTCTTTATTCCTCGAACATTTAATTCATCTCCTCTCCAATTGGTTGAAGCGGAAGAGGAAAGCAGCATTGTTCGAAGCGGTAGAGAAGCTAAAATCAGTATTGATGCTTCTAGGGTTCATGTCGCTAACTCTGACGGTAACTCAACAACCTGTATCTAAGATTTGTATTCCGAATAGCGTGGCGTATACGATGCTTCCGTGCCAGAGAGAAATACAGATCACGGCGAGTAAGAATTTGGAGATGGATAAATTCCAATCAAACCAGTCGTTTTCATGGTTGCCGGAGAAAGTTGAGAGCAGTAGTAGTAACAGCGATTCTTCTTCTTCTTCTTCATCTTCATCTTCGGATTACTGTACTGCGAAGGGGAAAGCGTCACTGATGTCGCAAGGTGGAATGAATCAACTCAACAATTTCATATTTGTGTTGGCTGTTATGCAGATTCTCTACAGTGTTCTCACCATGGCATTGGGAAGAGCTAAGATGAGGCGTTGGAAAGCTTGGGAGGAAGAAACTAATACGTTGGATTATCAAGTGGCCAATGATCCAAATCGTTTTAGACTGACAAGGCAAACGACATTTGGACGTCGGCACATCAGTTCCTGTGCAACACCATCATTTCTTCTTTGGAGTATATGCTTCTTCAGACAGTTCTTTCGTTCTGTAGCCAAAGTTGACTACTTGACCCTTCGCCATGGTTTCATCTCGACTCATGTACCTGGAAACACTTCCTTCAACTTCCAAAAGTACATTGAAAGATCATTACACGATGATTTCAAAGTCGTCGTTGGCATCAGTCCTTTCATGTGGCTCATAGTTGTCATCTTCATTCTAGTGGATGTACATGGCTGGAATGCATATCTCTGGGTGTCTTTCCTTCCACTCATTATAGTGTTGGCTCTTGGAACAAAGTTTGAAGTAATAGTAGCAAGGCTTGCCCTTCAACTTCAAAACAAGACAGTTGTGGTCAAAGGAGCTCCCATGGTTGAACCAAGTGATGAACTCTTTTGGTTTAATCACCCTAAATTTGTTCTCACCCTTCTTCATTTCACTTTGTTTATGAATGCCTTCGAATTTTCATTTTTCATCTGGGTTACGCTACAATATGGGATAAATTCTTGCTACCATGAAAACTTGGTGGTCATCATCATTAGAGTGGTCTTAGCAGTCACAGTCCAAGTTTTGTGTAGCTACATTACTCTGCCTCTCTATGCTCTTGTCACACAGATGGGGTCACAGTTCAAAGCTGCAGCATTAGAAGAACACACAGCCAAAGCCATAAAGAAATGGCACAAAGATGTGAAACATAAGAGAAAGAAGCCTTCCCATCACCATGACCTTGACTCAAACCAGCACCAAGAAGGCTCATCACACTCCGTCTCCGAGCACCCATCGTCTCGAGTTTTTGAGGGTAGTAGCCGAACCCTAAATTCGGATCAAGAGATCATGAGCTCTTCTCATCATAGAGCTCTCTCTTTTGCTGAGCTCAACGGTGTTAGTATTACTGAGTGTGATGAGATTGTTGAAGAAAAACTCAGAGATTCTGTAGTAACAAAAGGTGAATCTGCAGTTTCAAATAAGGTAATGGAGATAGAAATAGGAGAGATTAGTGAAATTCATGAAGAAACAATTACCTTAAGTACTCCTCAAAATGAAAGACGAATTTCCTAG 1755 42.11 MAAAALDPSSLQFTSTWAVAAVCFFFISLSLFLEHLIHLLSNWLKRKRKAALFEAVEKLKSVLMLLGFMSLTLTVTQQPVSKICIPNSVAYTMLPCQREIQITASKNLEMDKFQSNQSFSWLPEKVESSSSNSDSSSSSSSSSSDYCTAKGKASLMSQGGMNQLNNFIFVLAVMQILYSVLTMALGRAKMRRWKAWEEETNTLDYQVANDPNRFRLTRQTTFGRRHISSCATPSFLLWSICFFRQFFRSVAKVDYLTLRHGFISTHVPGNTSFNFQKYIERSLHDDFKVVVGISPFMWLIVVIFILVDVHGWNAYLWVSFLPLIIVLALGTKFEVIVARLALQLQNKTVVVKGAPMVEPSDELFWFNHPKFVLTLLHFTLFMNAFEFSFFIWVTLQYGINSCYHENLVVIIIRVVLAVTVQVLCSYITLPLYALVTQMGSQFKAAALEEHTAKAIKKWHKDVKHKRKKPSHHHDLDSNQHQEGSSHSVSEHPSSRVFEGSSRTLNSDQEIMSSSHHRALSFAELNGVSITECDEIVEEKLRDSVVTKGESAVSNKVMEIEIGEISEIHEETITLSTPQNERRIS* 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8280574 8290413 + CsaV3_1G012980.1 Csa01g01298 515795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g01298 584 MobiDBLite consensus disorder prediction 481 503 - -
Csa01g01298 584 PANTHER MLO-LIKE PROTEIN 2 514 - -
Csa01g01298 584 PANTHER MLO-LIKE PROTEIN 1 2 514 IPR004326 GO:0006952|GO:0016021
Csa01g01298 584 Pfam Mlo family 10 489 IPR004326 GO:0006952|GO:0016021
Csa01g01298 584 MobiDBLite consensus disorder prediction 458 503 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa01g01298 Csa06g01679 CCT
Csa01g01298 Csa06g01679 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01298 Csa-Chr1:8280574 Csa06g01679 Csa-Chr6:14713131 1.57E-170 dispersed
Csa01g01295 Csa-Chr1:8230778 Csa01g01298 Csa-Chr1:8280574 1.14E-171 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g01298 K08472 - csv:101221560 1078.16