Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g01437 | ATGGCGGACGAAGTTCAGAATGATGTGAATGATCAGGTGGCAGATATTGCCCCCTTTGATCCAACTAAGAAGAAGAAGAAGAAGAAGGTTGTACTTCAGGATCCGACTGATGAGAGTGTTGACAAGTTAGCAGAGAAAACTGAAAGTTTGTCAGTTTCTGATGGATTGGAGGCTGCAACATTTTCTGGACTTAAAAAGAAGAAGAAGAAACCAGTAGAGGCAAGCTCCTTGAATGAAGATGGTGCAGATGCTACGGAGGATTTGGAAGATCAAGCGGGGGAAAATGAAGATCGTGAGGGACTGGTTCTACAGTATCGTTATCCTTGGGAGGGAACTGATCGCGATTATGAATACGAGGAGCTTCTTGGACGGGTATTCAACATCCTTAGAGAGAATAATCCAGAGCTTGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTACGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCATCGGCAGCCAGACCATGTTATGGCTTTCTTACTAGCTGAACTGGGAACCAGTGGCTCTCTTGATGGACAGCAGAGACTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGTCGATATGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCAGATACTATCCTTTCAAAGGAGAACCGGCTTTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGGTTTGTTGCTCGTGTTGGCCGGAGGAACACTGGGACATGA | 813 | 44.53 | MADEVQNDVNDQVADIAPFDPTKKKKKKKVVLQDPTDESVDKLAEKTESLSVSDGLEAATFSGLKKKKKKPVEASSLNEDGADATEDLEDQAGENEDREGLVLQYRYPWEGTDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT* | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9975186 | 9983461 | + | CsaV3_1G014460.1 | Csa01g01437 | 515934 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g01437 | 270 | MobiDBLite | consensus disorder prediction | 1 | 99 | - | - | |
Csa01g01437 | 270 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 219 | 254 | IPR016190 | GO:0003743|GO:0006413 | |
Csa01g01437 | 270 | MobiDBLite | consensus disorder prediction | 30 | 48 | - | - | |
Csa01g01437 | 270 | Gene3D | - | 113 | 255 | - | - | |
Csa01g01437 | 270 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT | 1 | 270 | - | - | |
Csa01g01437 | 270 | SMART | eIF2Bneu4 | 140 | 249 | IPR002735 | GO:0003743|GO:0006413 | |
Csa01g01437 | 270 | MobiDBLite | consensus disorder prediction | 61 | 76 | - | - | |
Csa01g01437 | 270 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 1 | 270 | IPR045196 | GO:0003743|GO:0006413 | |
Csa01g01437 | 270 | Pfam | Domain found in IF2B/IF5 | 139 | 248 | IPR002735 | GO:0003743|GO:0006413 | |
Csa01g01437 | 270 | MobiDBLite | consensus disorder prediction | 80 | 94 | - | - | |
Csa01g01437 | 270 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 115 | 222 | IPR016189 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g00480 | Csa-Chr1:3122227 | Csa01g01437 | Csa-Chr1:9975186 | 1.68E-25 | dispersed | |
Csa01g01437 | Csa-Chr1:9975186 | Csa01g01698 | Csa-Chr1:13371939 | 2.54E-08 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g01437 | K03238 | - | csv:101220978 | 528.865 |