Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g01453 ATGTTGTATAGCTACAAGAAAAGTTTTTCAGGGTTTTCAGCTAAGCTTAATGCAAGCCAAGCAATTGCATTATCAAAGATGGAAGACGTGATATCTGTATTTGAGAGTAGAACAATGAAACTCCACACAACAAGAAGTTGGGATTTCTTGGGACTTCCCATTCCCTCCTATACTAATAATAGGAGTGCACGATTTTCGCTTCATCTTCCTAGCTATGGCGATCATGACGTTGTTGTTGCCATATTTGATTCAGGTGTGTGGCCCGAATCAAAAAGTTTTGAAGAGAGTGAAGGAATAGGGAGAATTCCATGCAACTGGAAAGGGAAATGCGTTAAAGGATACAGATTCAACCCAGCATCAGCCTGCAACCGCAAACTAATTGGCGCTCGGTATTATCTTAAAGGCTTCGAAGCCCAATATGGAGCACTAAACACCACTGCCGACAACCCCGAGTTCCGCTCCCCTCGAGACTTCTTAGGTCACGGCACTCACACCGCTTCCACCGCGGTGGGTGCCGTTGTGCACAATGTTGGCTTCCCTACATCTTCATCACTAGCCAAAGGCACTGCTAGAGGAGGCGCGCCCTGGGCCAGGCTGGCGGTGTACAAGGTGTGTTGGGGGAAGGACTACGAAGGCAAGTGCACGGATGCGGATGTCATGGCTGCTTTCGACGACGCTTTGCATGACGGGGTGGACGTGATCTCCGCATCTTTTGGAGAGAGGCCGCCGTTGATTCCATTGTTCGAGTCGGCTTCTGCTATTGGCTCATTCCATGCGATGCAGAGGGGAGTGAGTGTGGTGTTCTCAGCTGGGAATGATGGATCCCACCCTTCCCTTGTTCAAAATGTGTCTCCTTGGAGTATTTGTGTGGCTGCTTCTACTATGGATCGAACCTTCCCTACTACAATATTTATCCTCAACCACTTCTCTATCATGGGGGAGAGCTTGATCACAAGAAATATAATAAACGTAAAGTTAGCAGATGCAATCAACTATTTCAATGATGGAATTTGCGAGAGAGAAAATATAAGAAAAGGTGGAAAATCAGGTAAAGGGAAAGTGGTGGTGTGTTTCTCCACAATTGGTCAAGTTTCCATAGCAACTGCTCAAGAAGCAGTGAAAGCCATAAATGCATCAGCTTTAATATTTGGTGCACCTCCCACTACGGAGCTCCCGGATTTAGATCTAATCCCCACCGTTCGTATTGACATTCATCAAGCTACTCAAATTCGAAACTTCCTTGCTGAATTACCCAGACTGCCTATGGTCGAGATTGGAGTTGCGAGAAGTGTGATCGGAAAATCTGTAGCTCCTACTGTGGCTTACTTTTCGTCTAGAGGACCAAGCTCTATTTTACCTGACATTCTCAAGCCAGATATAAGTGCACCGGGAGTGAATATATTGGCAGCATGGCCTCCAGAAACAGCACCGACGGTGAGGCCAAGTGGAAAGATTAATGAAGAAGAAGAAGAAGAAGAAGAAGGCGTAAAATGGAATTTCCAATCAGGAACTTCAATGTCATGTCCGCACGTTTCTGGGGTTGTTGCTCTCATCAAATCTGTCCATCCCAATTGGTCTCCTGCAGCGATTAGATCTGCCATTATCACCACAGCCACGAAGATAGACAGCAGTGGGAATACCATCCTAGCAGGCGGATCCATGAAAGCATCCGACCCATTCGACATTGGTGCAGGTCAAGTGAATCCCATAATGGCAATAAATCCAGGACTAATCTATGACATAACAACCAATGATTACATTACTTTCCTATGCAATATTGGCTACACTGACCAACAAATCAGCAACTTAATTCTCAACCCTTCTCCTCATTTTTGTTGTCGTCAATCCACTGCAACCATTGCAAACTTTAATTATCCGTCAATTACACTCGCCAATCTTCGCTCCACCACCACAATTAGAAGAATTGTCCGCAATGTATCACTCAATAAGAACGCTATTTACTTTCTTAGGGTTCTACCTCCCTATGGAGTTCGAGTACAGGTTTGGCCAAGGGTTCTCTTTTTCTCTTGCTATAGGCAACAAATTTCATACTATATTACTATAACTCCGCTTAGGAAATCTCGAGGAAGATATGGTTTTGGGGAGATTCAATGGTTTAATCGCTTCCATACTGTTACAAGTCCTCTCGTTGTACGTCTTGCTACTTAG 2169 44.95 MLYSYKKSFSGFSAKLNASQAIALSKMEDVISVFESRTMKLHTTRSWDFLGLPIPSYTNNRSARFSLHLPSYGDHDVVVAIFDSGVWPESKSFEESEGIGRIPCNWKGKCVKGYRFNPASACNRKLIGARYYLKGFEAQYGALNTTADNPEFRSPRDFLGHGTHTASTAVGAVVHNVGFPTSSSLAKGTARGGAPWARLAVYKVCWGKDYEGKCTDADVMAAFDDALHDGVDVISASFGERPPLIPLFESASAIGSFHAMQRGVSVVFSAGNDGSHPSLVQNVSPWSICVAASTMDRTFPTTIFILNHFSIMGESLITRNIINVKLADAINYFNDGICERENIRKGGKSGKGKVVVCFSTIGQVSIATAQEAVKAINASALIFGAPPTTELPDLDLIPTVRIDIHQATQIRNFLAELPRLPMVEIGVARSVIGKSVAPTVAYFSSRGPSSILPDILKPDISAPGVNILAAWPPETAPTVRPSGKINEEEEEEEEGVKWNFQSGTSMSCPHVSGVVALIKSVHPNWSPAAIRSAIITTATKIDSSGNTILAGGSMKASDPFDIGAGQVNPIMAINPGLIYDITTNDYITFLCNIGYTDQQISNLILNPSPHFCCRQSTATIANFNYPSITLANLRSTTTIRRIVRNVSLNKNAIYFLRVLPPYGVRVQVWPRVLFFSCYRQQISYYITITPLRKSRGRYGFGEIQWFNRFHTVTSPLVVRLAT* 723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10166376 10171015 + CsaV3_1G014620.1 Csa01g01453 515950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g01453 722 SUPERFAMILY Subtilisin-like 41 577 IPR036852 GO:0004252|GO:0006508
Csa01g01453 722 ProSiteProfiles Serine proteases, subtilase domain profile. 46 573 - -
Csa01g01453 722 Gene3D - 296 432 - -
Csa01g01453 722 CDD Peptidases_S8_3 40 539 IPR034197 -
Csa01g01453 722 ProSitePatterns Serine proteases, subtilase family, serine active site. 503 513 IPR023828 -
Csa01g01453 722 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 1 715 - -
Csa01g01453 722 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Csa01g01453 722 PRINTS Subtilisin serine protease family (S8) signature 502 518 IPR015500 -
Csa01g01453 722 PRINTS Subtilisin serine protease family (S8) signature 74 93 IPR015500 -
Csa01g01453 722 PRINTS Subtilisin serine protease family (S8) signature 157 170 IPR015500 -
Csa01g01453 722 Pfam Subtilase family 75 541 IPR000209 GO:0006508|GO:0008236
Csa01g01453 722 Pfam Fibronectin type-III domain 622 718 IPR041469 -
Csa01g01453 722 Gene3D Peptidase S8/S53 domain 76 586 IPR036852 GO:0004252|GO:0006508
Csa01g01453 722 Pfam Peptidase inhibitor I9 1 42 IPR010259 -
Csa01g01453 722 Gene3D - 590 721 - -
Csa01g01453 722 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 715 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01453 Csa-Chr1:10166376 Csa04g00590 Csa-Chr4:3888813 2.91E-167 dispersed
Csa01g01453 Csa-Chr1:10166376 Csa07g02348 Csa-Chr7:21727193 8.85E-149 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g01453 - - csv:101206755 1437.55