Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g01460 ATGACACTTGCTCTCATAAAAAACAATATAAAACCCGGGTGTCAGCATGATTCTCCCATATCCGCACCCCCTAAAATTCAAATGGCTACAATTCCAACAATTTCCTTAGACTTACTCTCTTCTCTCCCTACAACAATTTCCCTTCTATTTTTCTCCTTTACAGTCGCCTTCTCAATTTTCTCCTTCTCTCTTTTCCTTCTCCGCCTTAACCCTTGTTGTAACTGCTCTTTCTGTCGCGCCTATCTTTCTTCTTCCTGGTCTTCCTCTTTTCCAAACTTATCCGATTGGTACACTCACCTTCTTTCCCACTCCCCCACTGCCACGCTCCACCTCCACGTTATCTCCAATATCGTAACCGCCAACCCCGACAACGTCCAACACATCCTTAAATCCAACTTCCATAACTACCCCAAAGGAAAACCCTTCTCTTCCATCCTTGGTGACCTTCTTGGTCATGGAATTTTCAATGTGGATGGTCATTCTTGGCGGTTTCAACGCAAGATGGCGAGTTTGGAACTTGGGAGTTTGTCACTTCGGTCTCACGCGTTCGAGATTTTAACGACGGAGATTCGGAGTAGGTTGCTACCTACGATGAAGGGAGTTGGGAAGACGATGGAGGTGGTGGATTTGCAAGATGTGTTTAGGAGGTTTTCATTTGATAATATTTGTAGGTTTTCGTTTGGGTTGGATCCTGGGTGTTTGAGGTTGTGGCTGCCGACGTCGGAATTCGCAGTGGCATTTGATTTGGCGTCGAGATTGTCAGCAGAAAGAGCGATGGCAGCGTCGCCGATTATATGGAGGATTAAGAAGATGATGAGAGTGGGATCGGAGAGGAAGCTTAGGGAAGCGATTAAAATGGTAGATAGGTTAGCAATGGAAGTTATAAGGCAAAGGAGGAAGATGGGGTTTTCTAATAGAAATGATCTTCTCTCTAGATTCATGGCTTCTACCAATGATGATAGATACCTTAGAGACATTGTCGTCAGCTTCCTCCTCGCCGGTCGAGACACGGTGGCATCGGCGTTAACTAGCTTATTCTGGCTACTTTCCCAAAACCCGGAAGTCGAGACTGAAATTATCTCCGAGTCAGACCGGATCATGGGACCGGATCGAGACGCGGTCCCCAGTTTCGACAATCTTAAAGAAATGCACTATCTCCAAGCAGTGGTCTACGAGAACATGCGCCTCTTTCCACCGGTTCAGTTCGACTCCAAGTTTGCCGAGGAAGACGACATCTTGCCTGATGGTACATTCGTCCAGAAGGGCACAAGGGTAACTTACCACCCTTACGCCATGGGCCGAATGGACCGGATTTGGGGACTCGATTGTCTCCAGTTCAAACCGGAGAGGTGGCTCAAGAACGGTTACTTCACGCCCGAAAACCCCTTTAAGTTTCCGGTTTTTCAAGCCGGCTTAAGGGTCTGTTTAGGGAAGGAGCTAGCGGTGATGGATGTGAAATGTGTTGCAGTGGTATTGATTCGGAAGTTTAAGATCCGGTTGGCGGGAACCGATCGGATTGCTCGTTTTGCTCCCGGTCTAACGGCTAGCTGGAGAGGTGGGTTACCGGTTAGAATTGAGGAAAGATCCAATTGTTAA 1596 47.37 MTLALIKNNIKPGCQHDSPISAPPKIQMATIPTISLDLLSSLPTTISLLFFSFTVAFSIFSFSLFLLRLNPCCNCSFCRAYLSSSWSSSFPNLSDWYTHLLSHSPTATLHLHVISNIVTANPDNVQHILKSNFHNYPKGKPFSSILGDLLGHGIFNVDGHSWRFQRKMASLELGSLSLRSHAFEILTTEIRSRLLPTMKGVGKTMEVVDLQDVFRRFSFDNICRFSFGLDPGCLRLWLPTSEFAVAFDLASRLSAERAMAASPIIWRIKKMMRVGSERKLREAIKMVDRLAMEVIRQRRKMGFSNRNDLLSRFMASTNDDRYLRDIVVSFLLAGRDTVASALTSLFWLLSQNPEVETEIISESDRIMGPDRDAVPSFDNLKEMHYLQAVVYENMRLFPPVQFDSKFAEEDDILPDGTFVQKGTRVTYHPYAMGRMDRIWGLDCLQFKPERWLKNGYFTPENPFKFPVFQAGLRVCLGKELAVMDVKCVAVVLIRKFKIRLAGTDRIARFAPGLTASWRGGLPVRIEERSNC* 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10240997 10243606 - CsaV3_1G014690.1 Csa01g01460 515957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g01460 531 Pfam Cytochrome P450 103 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 Gene3D Cytochrome P450 86 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PANTHER CYTOCHROME P450 94C1 48 527 - -
Csa01g01460 531 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 SUPERFAMILY Cytochrome P450 92 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g01460 531 PANTHER CYTOCHROME P450 48 527 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01460 Csa-Chr1:10240997 Csa03g03407 Csa-Chr3:30730099 0 dispersed
Csa01g01460 Csa-Chr1:10240997 Csa01g00063 Csa-Chr1:362093 4.18E-138 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g01460 K20624 - csv:101207724 988.408