Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g01525 ATGAAATTCTTTATTTCTCCTCTCATTTTCTTCTCATTTCTTTTGTTAATATCACCTGCCATTGCTACCAAAAAGTCTTATGTTGTGTTATTGGGATCTCATTCTCATGGGTTAGACGCTACAGAGAAAGATTTTAAAAGGGTGGTTGATTCCCATCACAAATTACTTGGATCCTTCTTGAGGAGTGAAGAAAAGGCAAAAGATGCCATATTTTACTCCTATAAGAAGAATATAAACGGATTTGCAGCAACTCTAGACGATGAAGATGCAACCCGACTTGCAAATCATCCAGAAGTAGCAGCAGTATTGCCAAACAAAGCAAAAAACTTATACACAACACATTCATGGGAATTCATGCATTTGGAGAAAAATGGTGTAATTCCCCCTTCTTCTCCTTGGTGGAGGGCTAAATTTGGAAAAGATGTCATTATTGCCAATCTTGACACAGGTGTATGGCCAGAGTCAAAGAGTTTTGGCGAACATGGCATAGTTGGACCTGCCCCATCAAAGTGGAAAGGAGGTTGTACTGATGATAAAACCCCTGATGGAGTGCCTTGTAACCAAAAATTAATCGGAGCAAAGTACTTCAACAAGGGCTACTTCGAGTACTTGAAATCTGAAAATTCCACTGTTGACCTCTCATCTATCATCAACTCCACTCGCGACTACAACGGTCATGGATCCCACACACTGTCCACGGCTGGTGGCAACTATGTGGTCGGCGCCAGCGTGTTTGGGTCCGGTATCGGAACAGCTAAAGGAGGATCTCCAAAGGCTCGTGTTGCTGCTTATAAGGTTTGTTGGCCATACGAGCATGGTGGTTGCTTCGATGCTGACATCACTGAGGCATTTGACCATGCCATCCACGATGGTGTTGATGTTCTTTCACTCTCTCTCGGCAGTGATGCCATCAAATACTCCGAGGATGCCATCGCCATTGCCTCCTTCCATGCAGTGAAGAAGGGAATTCCTGTCGTGTGCGCTGTTGGGAACTCTGGTCCCTTACCGAAGACGGCTTCTAATACTGCTCCTTGGATTTTGACTGTTGGTGCAAGTACTTTGGATCGTGAATTTTATGCTCCTGTTGTGCTTCGAAATGGTTATAAATTCATGGGTTCAAGTCATTCAAAAGGATTAAGGGGAAGGAATCTATACCCATTGATAACCGGAGCTCAGGCAAAAGCTGGTAACGCCACTGAGGACGATGCCATGCTTTGCAAGCCGGAAACATTGGACCATTCAAAAGTGAAAGGGAAGATATTGGTTTGCTTGAGAGGAGAAACGGCAAGGTTGGACAAAGGAAAACAAGCGGCCCTTGCCGGTGCTGTTGGAATGATTTTATGCAACGATAAGCTCAGTGGGACTTCCATCAACCCAGATTTTCACGTTCTTCCAGCTTCTCACATCAATTACCATGATGGTCAAGTTCTTCTATCTTACACCAACTCCGCCAGATATCCAATGGGGTGCTTAATCCCACCATTGGCAAGAGTTAACACCAAACCAGCTCCCACTATGGCGGTCTTCTCATCCCGAGGACCCAATACTATTTCACCAGAGATTATCAAGCCTGATGTGACCGCTCCAGGAGTAGACATAATTGCGGCATTTTCAGAAGCTATAAGTCCAACTCGCGATCCATCTGATAACAGAACAACTCCATTCATTACAATGTCAGGTACCTCCATGTCTTGCCCCCACGTCGCTGGCCTCGTCGGCCTCCTCCGAAATCTCCACCCTGATTGGACCCCCTCCGCCATTAAATCTGCCATCATGACCTCCGCCCAAGTCCGTGACAACACATTGAACCCCATGCTCGATGGGGGATCTCTTGGCCTCGACCCTGCCACTCCATTTGCATATGGCTCCGGCCACATCAACCCTACTGGAGCCGTTGACCCCGGCCTTGTCTACGACCTCTCCCCCAACGACTACTTGGAATTCCTCTGCGCCAGCGGCTACGACGAGAGGACCATTCGTGCATTCTCTGATGAACCTTTCAAATGTCCTGCTTCTGCTTCTGTTTTGAACCTTAATTACCCTTCCATTGGGGTTCAAAATTTGAAAGATAGTGTCACTATCACTAGAAAGCTGAAGAACGTTGGGACTCCTGGAGTTTATAAAGCTCAGATTCTCCACCCCAACGTAGTTCAGGTTTCTGTGAAGCCCAGATTTCTGAAGTTTGAGAGAGTTGGAGAAGAGAAGAGCTTTGAGTTGACGGTCAGTGGAGTTGTGCCAAAGAATCGTTTTGCTTACGGCGCTTTGATTTGGAGTGATGGCAGACACTTTGTGAGGAGTCCCATTGTTGTTTCTTCGGGCTTATTCTGA 2328 46.26 MKFFISPLIFFSFLLLISPAIATKKSYVVLLGSHSHGLDATEKDFKRVVDSHHKLLGSFLRSEEKAKDAIFYSYKKNINGFAATLDDEDATRLANHPEVAAVLPNKAKNLYTTHSWEFMHLEKNGVIPPSSPWWRAKFGKDVIIANLDTGVWPESKSFGEHGIVGPAPSKWKGGCTDDKTPDGVPCNQKLIGAKYFNKGYFEYLKSENSTVDLSSIINSTRDYNGHGSHTLSTAGGNYVVGASVFGSGIGTAKGGSPKARVAAYKVCWPYEHGGCFDADITEAFDHAIHDGVDVLSLSLGSDAIKYSEDAIAIASFHAVKKGIPVVCAVGNSGPLPKTASNTAPWILTVGASTLDREFYAPVVLRNGYKFMGSSHSKGLRGRNLYPLITGAQAKAGNATEDDAMLCKPETLDHSKVKGKILVCLRGETARLDKGKQAALAGAVGMILCNDKLSGTSINPDFHVLPASHINYHDGQVLLSYTNSARYPMGCLIPPLARVNTKPAPTMAVFSSRGPNTISPEIIKPDVTAPGVDIIAAFSEAISPTRDPSDNRTTPFITMSGTSMSCPHVAGLVGLLRNLHPDWTPSAIKSAIMTSAQVRDNTLNPMLDGGSLGLDPATPFAYGSGHINPTGAVDPGLVYDLSPNDYLEFLCASGYDERTIRAFSDEPFKCPASASVLNLNYPSIGVQNLKDSVTITRKLKNVGTPGVYKAQILHPNVVQVSVKPRFLKFERVGEEKSFELTVSGVVPKNRFAYGALIWSDGRHFVRSPIVVSSGLF* 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10916683 10920158 - CsaV3_1G015340.1 Csa01g01525 516022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g01525 775 CDD Peptidases_S8_3 110 595 IPR034197 -
Csa01g01525 775 Pfam PA domain 402 476 IPR003137 -
Csa01g01525 775 Gene3D Peptidase S8/S53 domain 141 645 IPR036852 GO:0004252|GO:0006508
Csa01g01525 775 Gene3D - 649 773 - -
Csa01g01525 775 CDD PA_subtilisin_like 362 489 - -
Csa01g01525 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Csa01g01525 775 ProSiteProfiles Serine proteases, subtilase domain profile. 115 632 - -
Csa01g01525 775 SUPERFAMILY Subtilisin-like 112 636 IPR036852 GO:0004252|GO:0006508
Csa01g01525 775 SUPERFAMILY PA domain 395 486 IPR046450 -
Csa01g01525 775 Gene3D - 355 499 - -
Csa01g01525 775 PANTHER BNAC02G33520D PROTEIN 12 772 - -
Csa01g01525 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Csa01g01525 775 PANTHER PEPTIDASE S8 12 772 - -
Csa01g01525 775 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Csa01g01525 775 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Csa01g01525 775 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Csa01g01525 775 Pfam Fibronectin type-III domain 677 770 IPR041469 -
Csa01g01525 775 Pfam Peptidase inhibitor I9 26 106 IPR010259 -
Csa01g01525 775 SUPERFAMILY Protease propeptides/inhibitors 25 106 - -
Csa01g01525 775 Pfam Subtilase family 139 622 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01525 Csa-Chr1:10916683 Csa07g00232 Csa-Chr7:1828536 0 dispersed
Csa01g01525 Csa-Chr1:10916683 Csa01g01526 Csa-Chr1:10921883 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g01525 - - csv:101213345 1558.5