Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g01526 ATGGCTGCCAAAAAGAATATATCTTATATTGTGTTATTGGGATCCCATTCACATGGATTAGAAGTTACAGATGAAGATCTTAAAAGGGTGGCTGATTCCCATCACAAGTTGCTTGGATCCATCTTTGGAAGTGATGAGAAGGCAAGAAATGCTATATTTTACTCCTATAAGAAGAATATAAATGGTTTTGCAGCAATTATGGATGAGGAAGAGGCAGCCCAGCTTGCAAAACACCCGGAAGTAGCAGCAGTATTGCCAAACAGAGCAAAAAAGTTACACACAACACATTCATGGGAGTTTATGCATTTGGAGAAGAATGGTGTAATTCCCCCTTCATCTGCTTGGCGTAGGGCTAAGTCTGGAAAAGACGTCATTATCGCCAATCTTGACACTGGTGTGTGGCCGGAGTCCAAGAGTTTTGGAGAACATGGGATAGTTGGACCTGTTCCATCAAAGTGGAAAGGAGGTTGCACTGATAAAACCCTTGATAGAGTGCCATGTAACAGGAAACTAATAGGAGCAAAGTACTTCAACAAGGGCTTCCTCGCATACTTGAAGTCTGAGAATTTGACAGCATTGGTGATTAACTCCACTCGTGACTACGACGGTCATGGTTCACACACCTTGTCCACGGCTGGGGGCAGCTATGTGTCTGGCGCCAGTGTGTTCGGGTTAGGCGTTGGAACTGCCAAAGGGGGCTCTCCCAAGGCACGTGTTGCTGCCTATAAGGTTTGCTGGCCACTTGAGGATGGAGGTTGTTTCGACGCTGACATTGCCCAGGCATTTGACCATGCCATTCACGACCGCGTTGATGTTCTTTCGCTCTCCCTTGGTGGCGAGCCAGCCGATTATTATGATGATGGAATCGCCATTTCAGCATTCCATGCAGTGAAGAAGGGAATCCCTGTGGTGTGCTCGGCTGGTAACTCTGGCCCTGGTGCTCAGACTGTTTCTAATACTGCACCTTGGATTTTGACTGTTGGTGCAAGTACTATGGATCGTGAGTTTCAGGCTCCTGTTGAGCTCCAAAATGGTCACCGTTATATGGGTTCGAGCCTTTCAAAAGGATTAAAGGGAGACAAGCTTTATCCATTAATAACTGGAGCTGAAGCGAAAGCGAAGAACGCCACCGCGGAGGAGGCCAGGCTTTGCAAACCAAAAACATTGGATCATTCAAAAGTGAAAGGGAAGATATTGGTTTGCTTGAGAGGAGACACTGCAAGAGTAGACAAAGGAGAACAAGCGGCCCTTGCCGGTGCTGTCGGAATGATTCTATGCAATGATGAGCTAAGTGGGTTCGAAACTATCGCAGATCCCCATGTTCTTCCTGCTTCCCATATCAATTACAATGATGGCCAAGCTGTTTTCTCTTACATCAAAACCACCAAGAATCCGATGGGGTATTTAATCCCACCAACGGCAAAAGTTAACACCAAACCTGCCCCCACTATGGCAGCCTTTTCATCTCGAGGACCCAACCTTATTTCCCCTGAGATTATCAAGCCAGATGTGACTGCACCGGGTGTGAATATAATTGCAGCATTCTCAGAGGCCGTAAGCCCAACAGGCGAACCATTTGACAATAGAACAGTTCCATTCATAACAATGTCAGGCACCTCCATGTCTTGCCCCCATGTCTCTGGTCTTGTTGGCCTTCTTAGAACTCTCCACCCTCAGTGGAGCCCCTCCGCCATCAAATCTGCCATCATGACCTCTGCCAGAATTCGTGACAACACAAAAAAACCCATGCTCGATGGTGGCTCCCCTGACCTCGCCCCTTCCACCCCTTTTGCCTATGGCTCTGGCCACATTCGCCCTACTGGAGCCATTGACCCCGGCCTCGTCTATGATCTGTCCCCCAATGACTACTTGGAATTCCTCTGCGCCAGTGGCTACAACGAGAAGACCATTCAAGCATTCTCTGATGGTCCTTTCAAATGTCCAGCTTCTGCTTCTATTTTAAACTTGAATTATCCTTCCATTGGGGTTCAGAATCTGACTGGCAGTGTCACCGTCACTAGGAAATTGAAGAACGTTAGCACTCCTGGGGTATACAAAGGCAGAGTTAGGCACCCCAATGGAGTCAAGGTTTTAGTGAAGCCCAAAGTTCTAAAGTTCGAGAGAGTTGGAGAGGAGAAAAGCTTTGAATTGACAATAACTGGAGATGTGCCAGAGGATCAGGTTGTTGACGGGGTGCTGATTTGGACTGATGGCAAGCACTTTGTTAGGAGTCCCATTGTCGTTTCCTCTAGCTTGTTCTGA 2262 47.39 MAAKKNISYIVLLGSHSHGLEVTDEDLKRVADSHHKLLGSIFGSDEKARNAIFYSYKKNINGFAAIMDEEEAAQLAKHPEVAAVLPNRAKKLHTTHSWEFMHLEKNGVIPPSSAWRRAKSGKDVIIANLDTGVWPESKSFGEHGIVGPVPSKWKGGCTDKTLDRVPCNRKLIGAKYFNKGFLAYLKSENLTALVINSTRDYDGHGSHTLSTAGGSYVSGASVFGLGVGTAKGGSPKARVAAYKVCWPLEDGGCFDADIAQAFDHAIHDRVDVLSLSLGGEPADYYDDGIAISAFHAVKKGIPVVCSAGNSGPGAQTVSNTAPWILTVGASTMDREFQAPVELQNGHRYMGSSLSKGLKGDKLYPLITGAEAKAKNATAEEARLCKPKTLDHSKVKGKILVCLRGDTARVDKGEQAALAGAVGMILCNDELSGFETIADPHVLPASHINYNDGQAVFSYIKTTKNPMGYLIPPTAKVNTKPAPTMAAFSSRGPNLISPEIIKPDVTAPGVNIIAAFSEAVSPTGEPFDNRTVPFITMSGTSMSCPHVSGLVGLLRTLHPQWSPSAIKSAIMTSARIRDNTKKPMLDGGSPDLAPSTPFAYGSGHIRPTGAIDPGLVYDLSPNDYLEFLCASGYNEKTIQAFSDGPFKCPASASILNLNYPSIGVQNLTGSVTVTRKLKNVSTPGVYKGRVRHPNGVKVLVKPKVLKFERVGEEKSFELTITGDVPEDQVVDGVLIWTDGKHFVRSPIVVSSSLF* 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10921883 10926110 - CsaV3_1G015350.1 Csa01g01526 516023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g01526 753 Pfam PA domain 378 454 IPR003137 -
Csa01g01526 753 Pfam Fibronectin type-III domain 655 748 IPR041469 -
Csa01g01526 753 Gene3D - 333 477 - -
Csa01g01526 753 SUPERFAMILY Subtilisin-like 92 614 IPR036852 GO:0004252|GO:0006508
Csa01g01526 753 Gene3D Peptidase S8/S53 domain 123 623 IPR036852 GO:0004252|GO:0006508
Csa01g01526 753 CDD Peptidases_S8_3 90 573 IPR034197 -
Csa01g01526 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Csa01g01526 753 PRINTS Subtilisin serine protease family (S8) signature 121 140 IPR015500 -
Csa01g01526 753 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Csa01g01526 753 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Csa01g01526 753 PANTHER PEPTIDASE S8 6 750 - -
Csa01g01526 753 PANTHER BNAC02G33520D PROTEIN 6 750 - -
Csa01g01526 753 Pfam Subtilase family 121 579 IPR000209 GO:0006508|GO:0008236
Csa01g01526 753 Pfam Peptidase inhibitor I9 8 92 IPR010259 -
Csa01g01526 753 ProSiteProfiles Serine proteases, subtilase domain profile. 97 610 - -
Csa01g01526 753 CDD PA_subtilisin_like 340 469 - -
Csa01g01526 753 SUPERFAMILY PA domain 391 460 IPR046450 -
Csa01g01526 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 93 IPR037045 -
Csa01g01526 753 Gene3D - 627 751 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01526 Csa-Chr1:10921883 Csa07g00232 Csa-Chr7:1828536 0 dispersed
Csa01g01525 Csa-Chr1:10916683 Csa01g01526 Csa-Chr1:10921883 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g01526 - - csv:101213582 1492.25