Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g01551 | ATGGCCTCAAAGTCGAATTTGAGACCTTCTGCAAAGCAACCTACGGGGATTACCGGCGTTAAAGGGACTGATGTGAGTGTTCTAAAGTCCTTACCTTCACAGACTTCATTAGGAAACAAAATTGGTTCTGTTGTCTCTGGAGATGTATTGAACTACACACAGAAATCCTTGAATCAGTCTACTTTGATTGATTCATCAAATAGCAAATCCTCAAGTTTAAATCATAAAGAGTCTACTGAGTCTTGTAATCAGATAATTAAAGAAAATTCCTCAAAGTCTGACGCTAAGACAGAAGGTCTTAACGGGACTCAGGGCTTAGCGGAGGACTCTATAGATTCCAAGAAGAAAATATCAGAATGTGGGAGTGGGAAGGATAGTTCAGTTTCTGCCAAAGTCAGTGATGGAACAAACAGTATTTCCAAGACGAGTGGAAGTGCAAAAATTAGTGACCGCATTGAGATGGTTGAGAGTGGCAAGAGCAGCATGTGTCGTGGAAGCACAAGCAGCGACATCAGTGACGAAAGTACTTGTAGCAGCTTTAGTAGTAGTATCAGTAAGCCTCACAAAGCAAATGACTTGAGATGGGAGGCCATCCAAGCTGTACGTGCAAGGGACGGGATATTGGGATTAGGTCATTTTAGACTATTGAAAAGACTGGGATGTGGGGATATCGGAAGCGTCTACCTGTCAGAGTTGAGTGGTACTAAATGTTATTTTGCTATGAAGGTCATGGACAAAGGGTCTCTAGCAAGTCGAAAGAAGTTGCTTCGAGCTCAGACTGAAAGAGAAATATTGCAATCTCTTGATCATCCATTCCTTCCTACATTATATACTCATTTTGAGACTGATAAATTTTCATGCTTAGTGATGGAGTTTTGCCCTGGGGGAGACTTGCACACTCTAAGGCAGAGGCAGCCAGGGAAGCATTTTACCGAACAGGCAGTGAAATTTTATGTAGCAGAGGTCCTCTTAGCACTCGAGTATCTTCATATGCTTGGGATTGTATACCGGGACCTTAAGCCTGAGAATGTTCTTGTGAGGGAAGATGGACATATAATGCTTTCAGACTTCGATCTTTCACTAAGATGTGCAGTTAGTCCAACATTGGTGAAGGGCTCATGTTCCGAGTCTGAACCTTTGAGAAAGAATTCAACTTATTGTGTTCAACCGGCTTGTATTGAACCTTCCTGCATCCAGCCCTCCTGTGTAGTTCCCACGACATGCTTCACTCCCCGACTTTTCTCTAGCAAGTCGAAGAAGGATAGAAAACCCAAGACTGAAATAGGAAATCAGGTAACGCCTTTGCCAGAGCTCATTGCAGAGCCTACCGAGGCGAGGTCAATGTCATTTGTTGGTACACATGAATATTTGGCACCAGAGATCATTAAAGGCGAAGGTCATGGAAGTGCTGTTGACTGGTGGACTTTTGGAATCTTCCTATATGAACTGTTGTTTGGTAAAACTCCTTTTAAGGGATCTGGGAATCGAGCCACGTTGTTCAACGTCGTTGGTCAGCCTTTGCGGTTTCCTGAATCACCAGTTGTCAGTTTTGCTGCAAGGGATCTCATCAGGGGATTGCTTGTCAAGGAACCACAGCATAGATTAGCTTACAAACGAGGGGCTACTGAGATCAAACAACATCCTTTCTTTGAAGGTGTTAACTGGGCACTGATACGTTGCGCTTCACCACCAGAAGTACCAAAGCCTGTTGAGATTGAGAGGATACCCTCACCAGCACCTCCAGTCAGTGGAAAAGCTATAATGGCTAGACCTGGCCCCGATTCCAAATCATCTGATAATTATCTGGAGTTTGATTTCTTTTAG | 1824 | 43.59 | MASKSNLRPSAKQPTGITGVKGTDVSVLKSLPSQTSLGNKIGSVVSGDVLNYTQKSLNQSTLIDSSNSKSSSLNHKESTESCNQIIKENSSKSDAKTEGLNGTQGLAEDSIDSKKKISECGSGKDSSVSAKVSDGTNSISKTSGSAKISDRIEMVESGKSSMCRGSTSSDISDESTCSSFSSSISKPHKANDLRWEAIQAVRARDGILGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKHFTEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKGSCSESEPLRKNSTYCVQPACIEPSCIQPSCVVPTTCFTPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERIPSPAPPVSGKAIMARPGPDSKSSDNYLEFDFF* | 608 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11109475 | 11114320 | - | CsaV3_1G015600.1 | Csa01g01551 | 516048 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g01551 | 607 | ProSiteProfiles | Protein kinase domain profile. | 213 | 550 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g01551 | 607 | Pfam | Protein kinase domain | 447 | 550 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g01551 | 607 | Pfam | Protein kinase domain | 214 | 366 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g01551 | 607 | MobiDBLite | consensus disorder prediction | 62 | 148 | - | - | |
Csa01g01551 | 607 | MobiDBLite | consensus disorder prediction | 62 | 108 | - | - | |
Csa01g01551 | 607 | Gene3D | Phosphorylase Kinase; domain 1 | 212 | 296 | - | - | |
Csa01g01551 | 607 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Csa01g01551 | 607 | SMART | serkin_6 | 213 | 550 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g01551 | 607 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 4 | 607 | - | - | |
Csa01g01551 | 607 | PANTHER | FLIPPASE KINASE 1-RELATED | 4 | 607 | - | - | |
Csa01g01551 | 607 | CDD | STKc_phototropin_like | 212 | 573 | - | - | |
Csa01g01551 | 607 | MobiDBLite | consensus disorder prediction | 122 | 147 | - | - | |
Csa01g01551 | 607 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Csa01g01551 | 607 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 334 | 346 | IPR008271 | GO:0004672|GO:0006468 | |
Csa01g01551 | 607 | Gene3D | Transferase(Phosphotransferase) domain 1 | 297 | 399 | - | - | |
Csa01g01551 | 607 | Gene3D | Transferase(Phosphotransferase) domain 1 | 444 | 568 | - | - | |
Csa01g01551 | 607 | SUPERFAMILY | Protein kinase-like (PK-like) | 189 | 578 | IPR011009 | - | |
Csa01g01551 | 607 | MobiDBLite | consensus disorder prediction | 576 | 599 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Csa01g01551 | Csa06g01287 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g01551 | Csa-Chr1:11109475 | Csa06g02664 | Csa-Chr6:23445828 | 0 | dispersed | |
Csa01g02591 | Csa-Chr1:22880655 | Csa01g01551 | Csa-Chr1:11109475 | 5.60E-132 | transposed | |
Csa02g00174 | Csa-Chr2:1214591 | Csa01g01551 | Csa-Chr1:11109475 | 1.87E-144 | transposed | |
Csa03g00720 | Csa-Chr3:6442047 | Csa01g01551 | Csa-Chr1:11109475 | 0 | transposed | |
Csa03g03977 | Csa-Chr3:34781972 | Csa01g01551 | Csa-Chr1:11109475 | 0 | transposed | |
Csa04g00768 | Csa-Chr4:5296189 | Csa01g01551 | Csa-Chr1:11109475 | 4.43E-113 | transposed | |
Csa04g01403 | Csa-Chr4:14058083 | Csa01g01551 | Csa-Chr1:11109475 | 1.08E-74 | transposed | |
Csa04g02100 | Csa-Chr4:21546349 | Csa01g01551 | Csa-Chr1:11109475 | 0 | transposed | |
Csa01g01551 | Csa-Chr1:11109475 | Csa06g03433 | Csa-Chr6:28317839 | 1.27E-108 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77801 | PF00069 | Pkinase | 5.30E-37 | CL0016 | Csa | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g01551 | K08286 | - | csv:101213662 | 1168.68 |