Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g01762 | ATGGATCTTCTCTTGTTGGAGAAGGCTTTAGTGGGGTTGTTTTTTACCATGGTTGTTGCCATTAGCATATCCAAGTTCAGGGGAAAGCGTTTTAAACTCCCACCAGGCCCCATTCCCATCCCCATATTTGGAAATTGGCTACAGGTGGGGGATGACTTGAACCATCGCAACTTGAGAGAGCTGGCCAAAAGGTTTGGTGACATATTGCTGTTGAGAATGGGACAACGAAACTTGGTGGTTGTTTCCTCACCAGAGTTGGCCAAGGAAGTGCTACACACCCAGGGAGTAGAGTTTGGGTCTAGGACTAGGAACGTGGTGTTCGATATATTCACAGATAAGGGTCAAGATATGGTGTTCACAGTGTACGGAGAGCACTGGAGGAAAATGAGGCGAATCATGACCGTCCCTTTTTTCACCAACAAGGTGGTCCAACAGAATAGGTTGGGTTGGGAGGAGGAGGCTGCCTTAGTTGTGGAGGATTTAAGAAACAATCCAGAGGCCTCCACCACAGGCGTGATTTTGAGGAAGCGGTTACAACTTCTAATGTATAACAATATGTATAGAATGATGTTTGACCAGAGATTTGACAACATGGAGGACCCTCTATTCAACAAACTCAAGCTTATAAATGCAGAGAGGAGTCGATTATCTCAGAGCTTTGATTATAACTACGGTGATTTCATTCCTATACTCAGGCCTTTCCTTACAAGGTATTTGAATGTCTGTAAGGACGTCAAGGAGAGGAGGCTTAGGCTTTTCAAGGACCACTTTGTCGATGAGAGGAGGAGACTAACTAGCACCATGAGCAACAATGAGTTGGTTGGTGGTGTAAAATGTGCCATTGATCATATTGTGGAGGCTCAAGAGAATGGTGAAATCACCGAAGAGAATGTTCTCTTTATTGTAGAGAACATCAATGTTGCTGCTATTGAGACAACATTGTGGTCCATGGAGTGGGCTATAGCTGAGCTAGTTAACCATCCAAACATCCAGAGCAAAGTGAGGGACGAGCTCGATTCAGTACTAAAAGATGGCGTCCAAATTACAGAGCCTGACATCCGCAAACTGCCTTACTTACAGGCTGTGATCAAGGAGACTTTACGGTTGAGAATGGCCATTCCTCTATTAGTGCCTCACATGAATCTTCAAGATGCCAAGTTGGGTGGTTATGACATTCCTGCAGAAAGCAAGATTTTAGTTAATGCATGGTGGCTGGCCAACAACCCTGATCACTGGAACAAACCCCAAGAATTTCGACCTGAGAGGTTCTTGGAAGAGGAGGGAAATGTAGAGCCTAGTGGGAATGACTTTAGATACCTTCCCTTCGGCGCTGGGAGGAGGAGTTGTCCTGGCATTATTCTCGCCTTGCCCATCCTTGCTATTACTTTGGGTCGTCTTCTTCAAAATTTTGAGCTCATGCCTCCTCCTGGACAATCCAAGATTGATACCACCGAAAAGCCTGGACAGTTTAGCTTACAAATATTCAATCACTCTACTATTGTGGCAAAACCAAGGTCTTTGTGA | 1524 | 45.01 | MDLLLLEKALVGLFFTMVVAISISKFRGKRFKLPPGPIPIPIFGNWLQVGDDLNHRNLRELAKRFGDILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNRLGWEEEAALVVEDLRNNPEASTTGVILRKRLQLLMYNNMYRMMFDQRFDNMEDPLFNKLKLINAERSRLSQSFDYNYGDFIPILRPFLTRYLNVCKDVKERRLRLFKDHFVDERRRLTSTMSNNELVGGVKCAIDHIVEAQENGEITEENVLFIVENINVAAIETTLWSMEWAIAELVNHPNIQSKVRDELDSVLKDGVQITEPDIRKLPYLQAVIKETLRLRMAIPLLVPHMNLQDAKLGGYDIPAESKILVNAWWLANNPDHWNKPQEFRPERFLEEEGNVEPSGNDFRYLPFGAGRRSCPGIILALPILAITLGRLLQNFELMPPPGQSKIDTTEKPGQFSLQIFNHSTIVAKPRSL* | 508 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 14380936 | 14382921 | + | CsaV3_1G026620.1 | Csa01g01762 | 516259 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g01762 | 507 | SUPERFAMILY | Cytochrome P450 | 34 | 505 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | E-class P450 group I signature | 439 | 449 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | E-class P450 group I signature | 449 | 472 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | Gene3D | Cytochrome P450 | 20 | 497 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 1 | 506 | - | - | |
Csa01g01762 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 442 | 451 | IPR017972 | GO:0005506|GO:0016705 | |
Csa01g01762 | 507 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 1 | 506 | - | - | |
Csa01g01762 | 507 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | PRINTS | P450 superfamily signature | 440 | 449 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01762 | 507 | Pfam | Cytochrome P450 | 34 | 493 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g01762 | Csa-Chr1:14380936 | Csa06g01117 | Csa-Chr6:9273652 | 0 | dispersed | |
Csa01g01762 | Csa-Chr1:14380936 | Csa01g00112 | Csa-Chr1:637804 | 9.02E-73 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g01762 | K00487 | - | csv:101208511 | 1009.59 |