Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g01806 ATGGGCGCCACCATTCTTCCAGATCTCGGTGCTCAGATTTTCATTCCTCTCTGTGCTATTGTCGGAATCCTCTTCTCTTTAGTCCAGTGGTACTACGTTTCACAAGTTAAACTCTCTTCTGCTCGTGATTCCGCTAATAACAATTCCTCTTCTGCTAAAAATGGCTACTCTGACTACCTTATTGAAGAGGAAGAAGGTGTTAATGACCATAACGTTGTTATTAAATGTGCCGAAATTCAAAACGCCATCTCTGAAGGGGCAACCTCCTTCCTTTTCACGGAGTACAAGTATGTTGGCATCTTTATGATATTGTTTGCAGCATTGATTTTTGTATTCCTTGGATCAGTAGAGGGTTTTAGTACCAAGCCCCAACCATGCTCATATGACAAAACAAAGACTTGTAAGCCAGCTTTGGCAACGGCTACATTCAGTACTATATCATTTTTGCTTGGTGCAGTGACTTCAGTGGTTTCTGGTTTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAACGGTCTCTTGGTTTTGTTTATTGCCATTAACCTCTTCAAATTGTACTATGGTGAAGATTGGGGTGGTCTTTTCGAGTCTATCACTGGGTATGGTCTTGGTGGATCCTCCATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACCAAAGCTGCTGATGTTGGTGCCGACCTTGTGGGTAAAGTGGAAAGAAACATTCCTGAGGACGACCCAAGAAATCCAGCTGTGATTGCTGATAATGTGGGTGACAATGTTGGGGATATTGCCGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAGTCATCCTGTGCTGCTCTCGTTGTTGCATCTATCTCCTCTTTCGGCAACAACCATGAGTTCACAGCAATGCTCTATCCACTCATCGTTAGTTCTATGGGTATCCTTGTCTGTCTGATCACCACTTTATTTGCAACGGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAATCAACTCATAATTTCCACTGTTATAATGACCTTTGGAATTGCAATTGTTACTTGGGTGAGTGTTCCAGCAAAATTCACCATCTTCAACTTTGGAACTCAAAAAGTTGTACAGAACTGGGAACTTTTCTTGTGCGTTGCTGTTGGTCTTTGGGCTGGGCTGATAATAGGATTTGTGACAGAGTACTATACTAGCAATGCATACAGCCCTGTGCAAGACGTTGCTGATTCTTGCCGAACTGGAGCTGCTACAAATGTTATTTTTGGCTTGGCCTTGGGATACAAATCTGTCATTATCCCTATCTTTGCAATTGCAGCTAGTATTTTTGTGAGTTTCTCCTTTGCTGCAATGTACGGCATTGCCGTTGCTGCCCTTGGAATGTTGAGTACAATTGCTACTGGTTTGGCCATCGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCTGAGATGGCTGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTTGATGCTGCTGGAAACACAACTGCAGCAATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCTCTCGTGTCCCTTGCCCTCTTTGGTGCCTTTGTTAGCCGTGCTGGTGTTGTCGTTGTTGACCTCTTGACACCCAAAGTTTTCATTGGCTTGATCGTTGGTGCTATGCTGCCATACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGGAGTGCAGCCCTAAAGATGGTTGAGGAGGTCCGAAGGCAATTCAACACAATCCCAGGTCTCATGGAAGGTACTGCCAAGCCCGACTATGCTACGTGTGTCAAGATCTCAACTGATGCATCTATTAAGGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACACCCCTCATTGTTGGTATCCTATTCGGAGTTGAAACTCTTTCTGGCGTCCTTGCTGGATCCCTTGTTTCTGGTGTCCAGATTGCCATTTCCGCATCCAACACCGGAGGTGCTTGGGACAATGCTAAGAAGTACATCGAGGCTGGTACCTCTGAGCACGCAAGAACCCTTGGCCCGAAAGGATCAGATCCACACAAAGCTGCTGTTATCGGGGACACAATCGGAGACCCACTCAAGGATACATCTGGACCTTCTCTCAACATTCTCATCAAGTTGATGGCTGTGGAGTCACTCGTGTTTGCTCCTTTCTTTGCCAGCCACGGTGGCATTCTGTTCAAGATCTTCTAA 2307 45.47 MGATILPDLGAQIFIPLCAIVGILFSLVQWYYVSQVKLSSARDSANNNSSSAKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYKYVGIFMILFAALIFVFLGSVEGFSTKPQPCSYDKTKTCKPALATATFSTISFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHEFTAMLYPLIVSSMGILVCLITTLFATDFFEIKAVKEIEPALKNQLIISTVIMTFGIAIVTWVSVPAKFTIFNFGTQKVVQNWELFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAASIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVVVVDLLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGTSEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGGILFKIF* 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15009088 15014094 + CsaV3_1G028050.1 Csa01g01806 516303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g01806 768 PIRSF H+-PPtase 11 766 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa01g01806 768 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 12 763 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa01g01806 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa01g01806 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 768 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa01g01806 768 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 1 768 - -
Csa01g01806 768 Pfam Inorganic H+ pyrophosphatase 23 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01806 Csa-Chr1:15009088 Csa02g00493 Csa-Chr2:3480114 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g01806 K23025 - csv:101222673 1456.04