Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g01888 ATGGCGGAACCCGAAAGCTTTGGAACTCACCAACTCGGAAGCTCCAACGCGGCTACTGAAGGCCAGGAAGATGATGAAGAAGAAATGGACGATTCGGATGATGAATCAGAGGTGGACTTGGGAGGAGAAGGAGGAGGAACAGGGAGTGAGTTCAAACCGACTGAGTTGACAACCGGTTCGTCGCTTAATGAAGCTTTGGTGACGGGTTCACTTTCTGAAACCCTAACGGTGGCTTCGTCCGCTGAAAACGGTCCGTCTGATGGTTTGCAGCCTGACGAAGGAGCTGAATTGAAGCAAGCTCCGTCTTCCCACAGTGAGCCTTTGGCTGTTGAAGCAACCCAGACAGATAAGGTGCAAGAACAAAACCGTCTTCAGTTGACGATATTTAAAGGGCCTGATTCAGACCAATCACCAACTTCAGTTACCCAGTCTATCTCATCCTATGCAAGTTCAAATTTATCTGAACATAAGCTGTCACCTAAGAGGGTCCAGAAAATATGTAAGCCAGAGCCAAGCCAGAAAAATTTCTTCAACCATAAAACTCCATCATCTGTTCCCAATGCAAGGACACCTGCTTCAGATGGTTACAATTGGAGAAAATACGGTCAGAAGCAAGTGAAGAGTCCTAAGGGTTCACGTAGCTATTACAAGTGTACATATTCTGAATGCTTTGCTAAGAAGATTGAATGTTGTGATGACTCAGGGCAAACAACAGAGATTGTTTACAAGAGTCAACATAGCCACGATCCACCTAGGAAGATTAGTACACCAAAGGAAAGTAAGCTTGTGCCTTATGTTGAGCCTGTGGTTAAAAAAATCATTGCTGAGCATTCCAGAAGAGTAATTAATGATTCAGATTCTCCCACACCTTCAAAAGAACCGTTACGAGAAGCAGCTATAGTCGTCTTTGAAAGGAAACGACAGCACTCAAATGATTCTAATGGAAATGATGAATATAAAATCAAAGATGAGAATGACGATGAACCTGGGACAAAACAAATAGTTAAAAAAAGCAGTGCGGGAAACTCAGGCACTCCTTTAAAACCTGGAAAGAAACCCAAATTTGTGGTGCATGCTGCAGGTGACGTTGGAATCTCGGGTGACGGATACAGATGGCGGAAGTATGGTCAGAAAATGGTGAAAGGAAATCCTCATCCTAGGAACTACTACCGATGTACTTCTGCTGGGTGTCCAGTCCGAAAGCACATTGAATCAGCGGTAGAAAATCCAAATGCAGTAATAATAACATACAAGGGAGTACATGACCACGACACGCCTGTACCAAAGAAACGACACGGTCCACCAAGTGCTCTTCTTGTAGCTGCTGCAGCACCAGCCTCCATGAGCAGCAATGCACAACCGAAGAAAACTGATGTGGTGGAGTCCCAAATATCTTCAACACAGTGGTCTGTGGATGCTGAAGGAGAGTTGACTGGTGAGGCCTTGGAGCTTGGGGGTGAGAAGGCAATGGAATCTGCTCGAACACTTTTGAGCATTGGATTTGAAATCAAGCCTTGCTGA 1521 45.04 MAEPESFGTHQLGSSNAATEGQEDDEEEMDDSDDESEVDLGGEGGGTGSEFKPTELTTGSSLNEALVTGSLSETLTVASSAENGPSDGLQPDEGAELKQAPSSHSEPLAVEATQTDKVQEQNRLQLTIFKGPDSDQSPTSVTQSISSYASSNLSEHKLSPKRVQKICKPEPSQKNFFNHKTPSSVPNARTPASDGYNWRKYGQKQVKSPKGSRSYYKCTYSECFAKKIECCDDSGQTTEIVYKSQHSHDPPRKISTPKESKLVPYVEPVVKKIIAEHSRRVINDSDSPTPSKEPLREAAIVVFERKRQHSNDSNGNDEYKIKDENDDEPGTKQIVKKSSAGNSGTPLKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVENPNAVIITYKGVHDHDTPVPKKRHGPPSALLVAAAAPASMSSNAQPKKTDVVESQISSTQWSVDAEGELTGEALELGGEKAMESARTLLSIGFEIKPC* 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15852778 15856825 + CsaV3_1G028960.1 Csa01g01888 516385

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g01888 506 MobiDBLite consensus disorder prediction 174 191 - -
Csa01g01888 506 MobiDBLite consensus disorder prediction 51 86 - -
Csa01g01888 506 SUPERFAMILY WRKY DNA-binding domain 362 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 ProSiteProfiles WRKY domain profile. 361 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 MobiDBLite consensus disorder prediction 304 353 - -
Csa01g01888 506 SMART WRKY_cls 366 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 Pfam WRKY DNA -binding domain 194 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 Pfam WRKY DNA -binding domain 368 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 MobiDBLite consensus disorder prediction 1 213 - -
Csa01g01888 506 MobiDBLite consensus disorder prediction 304 333 - -
Csa01g01888 506 MobiDBLite consensus disorder prediction 106 157 - -
Csa01g01888 506 ProSiteProfiles WRKY domain profile. 187 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 504 IPR044810 GO:0003700
Csa01g01888 506 Gene3D WRKY domain 351 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 Gene3D WRKY domain 180 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 SUPERFAMILY WRKY DNA-binding domain 190 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g01888 506 MobiDBLite consensus disorder prediction 20 40 - -
Csa01g01888 506 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 19 504 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g01888 - - - csv:101209954 957.592
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01888 Csa-Chr1:15852778 Csa03g00441 Csa-Chr3:3723776 1.05E-14 dispersed
Csa01g01888 Csa-Chr1:15852778 Csa05g03014 Csa-Chr5:30396040 2.57E-15 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi11g667 Blo01g00629 . . . . Bpe02g02123 Bma07g00734 Bma11g00638 Cmo10g00500 Cmo11g00459 . . . . Sed08g0583 . Cpe18g00567 Bhi02g00875 Tan09g1563 Cmetu02g1896 . Hepe09g0577 . . . . . . . . . Cone2ag0536 Cone16ag0479 Cone4ag0599 Cone7ag0569 Lsi06g01156 . . . Blo08g00516 Blo14g00596 . . . . Bma01g00327 . . . . Cma10g00467 Cma11g00458 Car10g00431 . . . . . . . . . . Cla06g01236 Cam06g1375 Cec06g1425 Cco06g1429 Clacu06g1333 Cmu06g1298 Cre06g2110 . Csa01g01888 Chy02g02124 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa07g00267 . 106 379 WRKY Transcription Factor Family AT2G04880 53.5 2.1e-75 280.0
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT5G56270 53.2 8.8e-70 261.9
Csa05g03014 . 13 505 WRKY Transcription Factor Family AT2G03340 51.9 1.9e-117 419.9
Csa01g00472 . 224 485 WRKY Transcription Factor Family AT2G03340 55.7 6.2e-68 255.4
Csa03g00384 . 329 612 WRKY Transcription Factor Family AT2G03340 50.2 3.2e-64 243.0
Csa05g03014 . 140 459 WRKY Transcription Factor Family AT1G13960 53.6 4.0e-82 302.0
Csa01g00472 . 223 486 WRKY Transcription Factor Family AT1G13960 53.8 1.1e-71 267.3
Csa03g00441 . 202 464 WRKY Transcription Factor Family AT1G13960 50.9 2.0e-65 246.5
Csa03g03028 . 160 383 WRKY Transcription Factor Family AT1G13960 52.7 7.7e-65 244.6
Csa05g02490 . 109 346 WRKY Transcription Factor Family AT1G13960 50.8 1.6e-41 167.2
Csa03g00441 . 23 528 WRKY Transcription Factor Family AT4G26640 52.1 6.1e-124 441.4
Csa01g00472 . 224 481 WRKY Transcription Factor Family AT4G26640 52.7 7.3e-69 258.5
Csa01g00472 . 221 471 WRKY Transcription Factor Family AT5G07100 57.7 6.2e-70 260.8
Csa03g03028 . 157 381 WRKY Transcription Factor Family AT5G07100 57.2 4.1e-66 248.1
Csa06g01599 . 146 374 WRKY Transcription Factor Family AT5G07100 53.9 2.0e-60 229.2
Csa01g01888 . 183 507 WRKY Transcription Factor Family AT4G30935 61.0 1.2e-99 360.5
Csa01g00472 . 230 575 WRKY Transcription Factor Family AT2G38470 56.1 1.6e-95 347.1
Csa03g00384 . 331 615 WRKY Transcription Factor Family AT2G38470 51.9 2.8e-68 256.5
Csa03g00441 . 210 452 WRKY Transcription Factor Family AT2G38470 53.7 2.7e-63 240.0
Csa05g03014 . 233 461 WRKY Transcription Factor Family AT2G38470 53.8 3.0e-62 236.5
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT4G26440 52.3 4.9e-66 249.2
Csa03g02485 . 75 166 WRKY Transcription Factor Family AT3G01970 77.2 1.1e-38 156.4
Csa04g00303 . 123 211 WRKY Transcription Factor Family AT3G01970 76.4 1.2e-37 152.9
Csa06g03497 . 113 583 WRKY Transcription Factor Family AT1G62300 53.8 1.9e-107 386.7
Csa01g00787 CCT,ECH 243 407 WRKY Transcription Factor Family AT1G62300 53.3 6.5e-39 159.1
Csa03g01879 . 253 337 WRKY Transcription Factor Family AT1G62300 82.4 1.0e-36 151.8
Csa03g01879 . 95 337 WRKY Transcription Factor Family AT1G68150 51.0 5.3e-53 205.3
Csa01g00218 CCT,ECH 252 357 WRKY Transcription Factor Family AT1G68150 75.5 1.8e-40 163.7
Csa06g03497 . 336 433 WRKY Transcription Factor Family AT1G68150 73.5 1.2e-36 151.0
Csa06g03497 . 51 578 WRKY Transcription Factor Family AT4G22070 52.0 5.2e-110 395.2
Csa03g01879 . 245 336 WRKY Transcription Factor Family AT4G22070 79.3 1.2e-37 154.8
Csa01g00218 CCT,ECH 243 413 WRKY Transcription Factor Family AT4G22070 53.4 1.6e-37 154.5
Csa01g00787 CCT,ECH 239 407 WRKY Transcription Factor Family AT4G22070 55.0 1.6e-37 154.5
Csa06g03497 . 131 579 WRKY Transcription Factor Family AT4G04450 52.1 3.0e-100 362.5
Csa07g00347 . 99 502 WRKY Transcription Factor Family AT4G04450 52.8 4.7e-93 338.6
Csa01g00218 CCT,ECH 252 413 WRKY Transcription Factor Family AT4G04450 59.1 1.6e-40 164.1
Csa07g00347 . 277 365 WRKY Transcription Factor Family AT1G18860 75.3 7.6e-37 152.1
Csa03g01879 . 253 394 WRKY Transcription Factor Family AT5G15130 70.4 8.3e-41 165.2
Csa03g00716 . 110 220 WRKY Transcription Factor Family AT2G44745 81.6 4.5e-52 201.4
Csa02g01560 CCT 127 232 WRKY Transcription Factor Family AT2G44745 70.8 2.4e-37 152.5
Csa06g02834 CCT 139 223 WRKY Transcription Factor Family AT2G44745 78.8 9.1e-37 150.6
Csa02g01560 CCT 127 247 WRKY Transcription Factor Family AT4G39410 73.2 6.7e-46 181.4
Csa06g02834 CCT 118 243 WRKY Transcription Factor Family AT4G39410 67.5 9.1e-43 171.0
Csa03g02453 . 143 333 WRKY Transcription Factor Family AT2G47260 51.2 5.2e-39 158.7
Csa04g00612 . 94 198 WRKY Transcription Factor Family AT5G41570 76.2 2.0e-42 169.1
Csa06g03763 . 97 262 WRKY Transcription Factor Family AT4G18170 56.6 3.3e-43 172.6
Csa07g01176 . 102 224 WRKY Transcription Factor Family AT4G18170 65.9 4.9e-39 158.7
Csa03g01529 CCT,ECH 137 316 WRKY Transcription Factor Family AT5G49520 53.7 1.5e-45 180.6
Csa06g01861 CCT,ECH 62 179 WRKY Transcription Factor Family AT5G49520 71.9 1.8e-43 173.7
Csa07g01176 . 123 250 WRKY Transcription Factor Family AT5G49520 61.7 1.2e-37 154.5
Csa04g00612 . 94 200 WRKY Transcription Factor Family AT1G64000 74.8 1.7e-42 169.5
Csa06g01861 CCT,ECH 62 170 WRKY Transcription Factor Family AT1G69310 68.1 1.7e-38 156.8
Csa06g03763 . 95 252 WRKY Transcription Factor Family AT1G29860 58.8 2.8e-46 182.6
Csa07g01176 . 106 221 WRKY Transcription Factor Family AT1G29860 70.7 1.9e-39 159.8
Csa03g01529 CCT,ECH 141 315 WRKY Transcription Factor Family AT1G29860 50.3 1.5e-36 150.2
Csa04g00303 . 123 213 WRKY Transcription Factor Family AT5G13080 86.8 7.4e-43 170.2
Csa03g02485 . 72 168 WRKY Transcription Factor Family AT5G13080 81.4 1.8e-41 165.6
Csa03g04408 . 1 291 WRKY Transcription Factor Family AT4G31550 62.1 6.2e-88 320.9
Csa03g04408 . 1 351 WRKY Transcription Factor Family AT2G24570 60.6 1.9e-107 386.0
Csa07g01660 . 100 245 WRKY Transcription Factor Family AT2G24570 55.3 1.6e-42 170.2
Csa02g01149 . 193 344 WRKY Transcription Factor Family AT2G24570 54.6 4.0e-41 165.6
Csa02g01149 . 1 349 WRKY Transcription Factor Family AT2G30590 52.1 8.6e-83 304.3
Csa07g01660 . 74 256 WRKY Transcription Factor Family AT2G30590 72.4 5.6e-74 275.0
Csa04g02431 . 216 376 WRKY Transcription Factor Family AT2G30590 59.5 1.4e-45 180.6
Csa02g02744 . 160 285 WRKY Transcription Factor Family AT2G30590 68.2 7.8e-44 174.9
Csa06g02959 . 125 279 WRKY Transcription Factor Family AT2G30590 60.0 1.3e-43 174.1
Csa03g04408 . 167 328 WRKY Transcription Factor Family AT2G30590 56.1 1.6e-41 167.2
Csa01g02192 . 127 270 WRKY Transcription Factor Family AT2G30590 56.5 6.2e-41 165.2
Csa07g01660 . 76 212 WRKY Transcription Factor Family AT3G04670 63.1 1.4e-40 163.7
Csa07g01660 . 78 256 WRKY Transcription Factor Family AT5G28650 70.1 2.0e-64 243.0
Csa06g02959 . 129 287 WRKY Transcription Factor Family AT5G28650 60.4 7.5e-43 171.4
Csa02g02744 . 181 287 WRKY Transcription Factor Family AT5G28650 72.9 7.0e-41 164.9
Csa06g03875 . 225 338 WRKY Transcription Factor Family AT1G30650 86.0 1.5e-54 210.7
Csa03g00861 . 135 230 WRKY Transcription Factor Family AT1G30650 66.1 1.8e-36 150.6
Csa05g00101 . 156 248 WRKY Transcription Factor Family AT4G01250 68.8 4.3e-37 152.1
Csa01g02661 . 148 279 WRKY Transcription Factor Family AT4G01250 57.8 1.6e-36 150.2
Csa05g00101 . 153 248 WRKY Transcription Factor Family AT5G52830 82.3 2.2e-45 179.9
Csa03g00861 . 138 236 WRKY Transcription Factor Family AT5G52830 74.5 1.7e-40 163.7
Csa01g02661 . 3 276 WRKY Transcription Factor Family AT2G34830 51.0 4.9e-58 222.2
Csa06g03875 . 228 338 WRKY Transcription Factor Family AT2G34830 90.1 1.7e-55 213.8
Csa03g00861 . 134 230 WRKY Transcription Factor Family AT2G34830 67.3 9.6e-38 154.8
Csa01g02303 . 49 257 WRKY Transcription Factor Family AT1G29280 52.4 8.2e-53 204.1
Csa07g00476 . 20 298 WRKY Transcription Factor Family AT3G58710 57.2 1.5e-52 203.4
Csa07g00267 . 106 379 WRKY Transcription Factor Family AT2G04880 53.5 2.1e-75 280.0
Csa03g04408 . 1 291 WRKY Transcription Factor Family AT4G31550 62.1 6.2e-88 320.9
Csa03g00716 . 110 220 WRKY Transcription Factor Family AT2G44745 81.6 4.5e-52 201.4
Csa02g01560 CCT 127 232 WRKY Transcription Factor Family AT2G44745 70.8 2.4e-37 152.5
Csa06g02834 CCT 139 223 WRKY Transcription Factor Family AT2G44745 78.8 9.1e-37 150.6
Csa02g01560 CCT 127 247 WRKY Transcription Factor Family AT4G39410 73.2 6.7e-46 181.4
Csa06g02834 CCT 118 243 WRKY Transcription Factor Family AT4G39410 67.5 9.1e-43 171.0
Csa06g03875 . 225 338 WRKY Transcription Factor Family AT1G30650 86.0 1.5e-54 210.7
Csa03g00861 . 135 230 WRKY Transcription Factor Family AT1G30650 66.1 1.8e-36 150.6
Csa03g04408 . 1 351 WRKY Transcription Factor Family AT2G24570 60.6 1.9e-107 386.0
Csa07g01660 . 100 245 WRKY Transcription Factor Family AT2G24570 55.3 1.6e-42 170.2
Csa02g01149 . 193 344 WRKY Transcription Factor Family AT2G24570 54.6 4.0e-41 165.6
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT5G56270 53.2 8.8e-70 261.9
Csa03g00441 . 23 528 WRKY Transcription Factor Family AT4G26640 52.1 6.1e-124 441.4
Csa01g00472 . 224 481 WRKY Transcription Factor Family AT4G26640 52.7 7.3e-69 258.5
Csa02g01149 . 1 349 WRKY Transcription Factor Family AT2G30590 52.1 8.6e-83 304.3
Csa07g01660 . 74 256 WRKY Transcription Factor Family AT2G30590 72.4 5.6e-74 275.0
Csa04g02431 . 216 376 WRKY Transcription Factor Family AT2G30590 59.5 1.4e-45 180.6
Csa02g02744 . 160 285 WRKY Transcription Factor Family AT2G30590 68.2 7.8e-44 174.9
Csa06g02959 . 125 279 WRKY Transcription Factor Family AT2G30590 60.0 1.3e-43 174.1
Csa03g04408 . 167 328 WRKY Transcription Factor Family AT2G30590 56.1 1.6e-41 167.2
Csa01g02192 . 127 270 WRKY Transcription Factor Family AT2G30590 56.5 6.2e-41 165.2
Csa05g00101 . 156 248 WRKY Transcription Factor Family AT4G01250 68.8 4.3e-37 152.1
Csa01g02661 . 148 279 WRKY Transcription Factor Family AT4G01250 57.8 1.6e-36 150.2
Csa03g02453 . 143 333 WRKY Transcription Factor Family AT2G47260 51.2 5.2e-39 158.7
Csa04g00612 . 94 198 WRKY Transcription Factor Family AT5G41570 76.2 2.0e-42 169.1
Csa01g00472 . 221 471 WRKY Transcription Factor Family AT5G07100 57.7 6.2e-70 260.8
Csa03g03028 . 157 381 WRKY Transcription Factor Family AT5G07100 57.2 4.1e-66 248.1
Csa06g01599 . 146 374 WRKY Transcription Factor Family AT5G07100 53.9 2.0e-60 229.2
Csa05g00101 . 153 248 WRKY Transcription Factor Family AT5G52830 82.3 2.2e-45 179.9
Csa03g00861 . 138 236 WRKY Transcription Factor Family AT5G52830 74.5 1.7e-40 163.7
Csa06g03763 . 97 262 WRKY Transcription Factor Family AT4G18170 56.6 3.3e-43 172.6
Csa07g01176 . 102 224 WRKY Transcription Factor Family AT4G18170 65.9 4.9e-39 158.7
Csa05g03014 . 13 505 WRKY Transcription Factor Family AT2G03340 51.9 1.9e-117 419.9
Csa01g00472 . 224 485 WRKY Transcription Factor Family AT2G03340 55.7 6.2e-68 255.4
Csa03g00384 . 329 612 WRKY Transcription Factor Family AT2G03340 50.2 3.2e-64 243.0
Csa06g03497 . 51 578 WRKY Transcription Factor Family AT4G22070 52.0 5.2e-110 395.2
Csa03g01879 . 245 336 WRKY Transcription Factor Family AT4G22070 79.3 1.2e-37 154.8
Csa01g00218 CCT,ECH 243 413 WRKY Transcription Factor Family AT4G22070 53.4 1.6e-37 154.5
Csa01g00787 CCT,ECH 239 407 WRKY Transcription Factor Family AT4G22070 55.0 1.6e-37 154.5
Csa01g01888 . 183 507 WRKY Transcription Factor Family AT4G30935 61.0 1.2e-99 360.5
Csa01g00472 . 230 575 WRKY Transcription Factor Family AT2G38470 56.1 1.6e-95 347.1
Csa03g00384 . 331 615 WRKY Transcription Factor Family AT2G38470 51.9 2.8e-68 256.5
Csa03g00441 . 210 452 WRKY Transcription Factor Family AT2G38470 53.7 2.7e-63 240.0
Csa05g03014 . 233 461 WRKY Transcription Factor Family AT2G38470 53.8 3.0e-62 236.5
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT4G26440 52.3 4.9e-66 249.2
Csa01g02661 . 3 276 WRKY Transcription Factor Family AT2G34830 51.0 4.9e-58 222.2
Csa06g03875 . 228 338 WRKY Transcription Factor Family AT2G34830 90.1 1.7e-55 213.8
Csa03g00861 . 134 230 WRKY Transcription Factor Family AT2G34830 67.3 9.6e-38 154.8
Csa07g01660 . 76 212 WRKY Transcription Factor Family AT3G04670 63.1 1.4e-40 163.7
Csa05g03014 . 140 459 WRKY Transcription Factor Family AT1G13960 53.6 4.0e-82 302.0
Csa01g00472 . 223 486 WRKY Transcription Factor Family AT1G13960 53.8 1.1e-71 267.3
Csa03g00441 . 202 464 WRKY Transcription Factor Family AT1G13960 50.9 2.0e-65 246.5
Csa03g03028 . 160 383 WRKY Transcription Factor Family AT1G13960 52.7 7.7e-65 244.6
Csa05g02490 . 109 346 WRKY Transcription Factor Family AT1G13960 50.8 1.6e-41 167.2
Csa06g03497 . 131 579 WRKY Transcription Factor Family AT4G04450 52.1 3.0e-100 362.5
Csa07g00347 . 99 502 WRKY Transcription Factor Family AT4G04450 52.8 4.7e-93 338.6
Csa01g00218 CCT,ECH 252 413 WRKY Transcription Factor Family AT4G04450 59.1 1.6e-40 164.1
Csa03g02485 . 75 166 WRKY Transcription Factor Family AT3G01970 77.2 1.1e-38 156.4
Csa04g00303 . 123 211 WRKY Transcription Factor Family AT3G01970 76.4 1.2e-37 152.9
Csa03g01529 CCT,ECH 137 316 WRKY Transcription Factor Family AT5G49520 53.7 1.5e-45 180.6
Csa06g01861 CCT,ECH 62 179 WRKY Transcription Factor Family AT5G49520 71.9 1.8e-43 173.7
Csa07g01176 . 123 250 WRKY Transcription Factor Family AT5G49520 61.7 1.2e-37 154.5
Csa04g00612 . 94 200 WRKY Transcription Factor Family AT1G64000 74.8 1.7e-42 169.5
Csa06g01861 CCT,ECH 62 170 WRKY Transcription Factor Family AT1G69310 68.1 1.7e-38 156.8
Csa06g03497 . 113 583 WRKY Transcription Factor Family AT1G62300 53.8 1.9e-107 386.7
Csa01g00787 CCT,ECH 243 407 WRKY Transcription Factor Family AT1G62300 53.3 6.5e-39 159.1
Csa03g01879 . 253 337 WRKY Transcription Factor Family AT1G62300 82.4 1.0e-36 151.8
Csa07g00347 . 277 365 WRKY Transcription Factor Family AT1G18860 75.3 7.6e-37 152.1
Csa01g02303 . 49 257 WRKY Transcription Factor Family AT1G29280 52.4 8.2e-53 204.1
Csa07g00476 . 20 298 WRKY Transcription Factor Family AT3G58710 57.2 1.5e-52 203.4
Csa06g03763 . 95 252 WRKY Transcription Factor Family AT1G29860 58.8 2.8e-46 182.6
Csa07g01176 . 106 221 WRKY Transcription Factor Family AT1G29860 70.7 1.9e-39 159.8
Csa03g01529 CCT,ECH 141 315 WRKY Transcription Factor Family AT1G29860 50.3 1.5e-36 150.2
Csa03g01879 . 253 394 WRKY Transcription Factor Family AT5G15130 70.4 8.3e-41 165.2
Csa07g01660 . 78 256 WRKY Transcription Factor Family AT5G28650 70.1 2.0e-64 243.0
Csa06g02959 . 129 287 WRKY Transcription Factor Family AT5G28650 60.4 7.5e-43 171.4
Csa02g02744 . 181 287 WRKY Transcription Factor Family AT5G28650 72.9 7.0e-41 164.9
Csa04g00303 . 123 213 WRKY Transcription Factor Family AT5G13080 86.8 7.4e-43 170.2
Csa03g02485 . 72 168 WRKY Transcription Factor Family AT5G13080 81.4 1.8e-41 165.6
Csa03g01879 . 95 337 WRKY Transcription Factor Family AT1G68150 51.0 5.3e-53 205.3
Csa01g00218 CCT,ECH 252 357 WRKY Transcription Factor Family AT1G68150 75.5 1.8e-40 163.7
Csa06g03497 . 336 433 WRKY Transcription Factor Family AT1G68150 73.5 1.2e-36 151.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006824 1 1 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 2 37
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30744 PF03106 WRKY 6.50E-24 CL0274 Csa TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa01g01888 Csa_Chr01 FPKM 29.424269 28.490625 1.287613 1.081809 6.018505 4.497391 5.66447 1.166431 1.000983 1.072346