Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g01963 | ATGTATTACCCATTTCTCAAGAGAGAAAAAATAATAATAATGAAGGAGGTGAAGATTGAATCTCCGGCATGGTCCGCCACGGTGGTGACGATTGTGGTGTTGTTGATCTTCATTATAACTGCGAAAGTTGGTTTGGTTTTATGGTGGAAACCAAAAAAAATAGAAAAACACTTTGATAGACAAGGAATTAAAGGCCCTCCTTATCGTTTCTTCATTGGTAATTTCAAAGAACTCGTTTCTTTGATGCTCGCTGCTTCTTCCCATCCAATGCCCAATTTCTCTCATAATATTCTCCCTCGAGTTCTCTCTTTTTATCATCATTGGAAGAAAATTTACGGTTCCACTTTTCTAATTTGGTTTGGACCTATTGTTCGAGTCGCTGTCTCTGACCCAGACATGATCCGAGAAATCTTCGCCACAAATTCCCACTTCTACGAGAAAAACGAAGCTCATCCTCTTGTTAAACAGCTTGAAGGCGATGGTCTCCTCACTCTCACTGGCCAAAAATGGGCTCTCCATCGCAAAATCATATCTCCCACTTTCCATGTGGATAATCTGAAATTGTTGATTCCGTTGGTGGAAGAGAGTGTGGTGGAAATGGTGGAGAAATGGTGGTCGATGGCGGAGAGTATGGACTCGGGTGAAGTGGAGATCGATGTTTACGATTGGTTCCAAACCCTAACGGAAGATGTTATTACTAAAACAGCATTTGGAAGTAGCTACGAAGATGGTAAAGCTATATTTAAGCTTCAAACTCAACAAATGATATTAGCTTCACAAGCTTTTCAAAAGGTCTTCATTCCTGGCTATAGATTTCTACCGACAAGAACGAATATAAATTCATGGAAATTAGACAGGGAAATAAAGAAATCATTGATGAAATTAATCGAGGGACGAAAAAGGAATTTAGAGAAAAAGAATTGGGGGATGAATGAAAAAAGACCAAAAGATTTGTTAGGGTTGATGATTCAAGCTTCTTTGTTAAACAACAACAACAATAATAATTCCTCCATTACTGTCCACGACATCGTTGAAGAGTGCAAAAGCTTCTTCTTTGCTGGCAAACAAACTACTTCCAATTTGCTGACGTGGACTACTGTCTTGCTGGCAATGCATCCACAGTGGCAAATCCAGGCACGTGACGAGGTCTTTAACGTCTGCGGTCCACGTGCCCTCCCTTCTAAACATGACGTCTCTAACTTTAAAATCCTAAGCATGATACTAAATGAATCCTTACGATTATACCCACCCACGGTGGCAACTATCCGACGTGCAAAGACTGACGTGGAGCTAGCGGGACGAATGATCCCACGCGGGACCGAGTTTTTGATCCCAATCATAGCCGTTCATCACGATCAAACCATATGGGGGAACGACGCAAGCGAGTTCAACCCAGGGCGGTTCTCTGAAGGAGTGAGCAAAGCCGCAAATCACCCCGCCGGGTTCATTCCATTTGGACTCGGTGTCCGTACATGCATTGGTCAAAATCTAGCCCTTTTGGAAGCAAAATTAACCCTCGCAATTATACTCCAACGCTTCACATTTCGTTTGGCTCCCACTTATCAACATGCACCCACGGTCCTGATGCTTCTTTATCCACAGTATGGGGCCCCCATTATTTTTCAGAAGATACCCATAAATTAA | 1644 | 42.34 | MYYPFLKREKIIIMKEVKIESPAWSATVVTIVVLLIFIITAKVGLVLWWKPKKIEKHFDRQGIKGPPYRFFIGNFKELVSLMLAASSHPMPNFSHNILPRVLSFYHHWKKIYGSTFLIWFGPIVRVAVSDPDMIREIFATNSHFYEKNEAHPLVKQLEGDGLLTLTGQKWALHRKIISPTFHVDNLKLLIPLVEESVVEMVEKWWSMAESMDSGEVEIDVYDWFQTLTEDVITKTAFGSSYEDGKAIFKLQTQQMILASQAFQKVFIPGYRFLPTRTNINSWKLDREIKKSLMKLIEGRKRNLEKKNWGMNEKRPKDLLGLMIQASLLNNNNNNNSSITVHDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPQWQIQARDEVFNVCGPRALPSKHDVSNFKILSMILNESLRLYPPTVATIRRAKTDVELAGRMIPRGTEFLIPIIAVHHDQTIWGNDASEFNPGRFSEGVSKAANHPAGFIPFGLGVRTCIGQNLALLEAKLTLAIILQRFTFRLAPTYQHAPTVLMLLYPQYGAPIIFQKIPIN* | 548 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 16501446 | 16504312 | + | CsaV3_1G029710.1 | Csa01g01963 | 516460 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g01963 | 547 | SUPERFAMILY | Cytochrome P450 | 65 | 542 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | P450 superfamily signature | 353 | 370 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | P450 superfamily signature | 406 | 417 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | P450 superfamily signature | 483 | 492 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | P450 superfamily signature | 492 | 503 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PANTHER | CYTOCHROMEA2 | 29 | 539 | - | - | |
Csa01g01963 | 547 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 485 | 494 | IPR017972 | GO:0005506|GO:0016705 | |
Csa01g01963 | 547 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 29 | 539 | - | - | |
Csa01g01963 | 547 | Gene3D | Cytochrome P450 | 47 | 543 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | Pfam | Cytochrome P450 | 102 | 525 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | E-class P450 group I signature | 109 | 128 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | E-class P450 group I signature | 227 | 245 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | E-class P450 group I signature | 342 | 359 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | E-class P450 group I signature | 362 | 388 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | E-class P450 group I signature | 482 | 492 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g01963 | 547 | PRINTS | E-class P450 group I signature | 492 | 515 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Csa01g01963 | Csa02g00167 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g01963 | Csa-Chr1:16501446 | Csa03g04190 | Csa-Chr3:36743086 | 1.21E-145 | dispersed | |
Csa04g02242 | Csa-Chr4:23069281 | Csa01g01963 | Csa-Chr1:16501446 | 2.13E-133 | transposed | |
Csa01g01963 | Csa-Chr1:16501446 | Csa02g00167 | Csa-Chr2:1164961 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g01963 | K15639 | - | csv:101213466 | 1080.86 |