Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02009 ATGATGGGGTACATTTGGTGGAATTTAGTGGCAATTTTAGCAATGGTTTTGCCAGTGAAATCTCAACTCAGTGTTGGATTTTATTCAAAGTCTTGTCCTAAAGCTGAGTTCATTGTTAGGTCTACTGTTGAGTCTTATTTCAAGGCTGATCCCACCATTGCTGCTGGCTTGCTCAGGCTTCACTTCCATGATTGTTTTGTTCAGGGATGCGATGGCTCAGTGTTGATAATGGATGAAAATGCTGAAATAAATGCAGGGCCAAACATGGGGTTAAGAGGATTTGAAGTCGTTGATGATGCAAAAGCCAAACTCGAAAATTTGTGTCCTGGTGTTGTTTCTTGTGCAGATATTCTTACTTTGGCTACTCGTGATGCCATAGACTTGAGTGATGGTCCAAGTTGGTCCGTGCCCACTGGAAGAAGAGACGGAAAAGTTTCGATCAGTTTTGATGCAGAAGATCTGCCTTCTCCATTCGAGCCCATCGATAACCACATACAAAAGTTTGCAGAGAAAGGCCTTACTGAAGAAGATCTTGTGACCTTAGTTGGTGCTCATACGATCGGGCGAACGGATTGCCAACTATTCAGTTACCGTCTACAAAACTTCACAAGCACAGGGAATGCAGACCCAACCATAAGCACATCGTTCTTGACTGAACTGAGAACTCTTTGTCCTTTAGATGGAGATCCATTCAGAGGAGTGGCCATGGACAAAGACAGCCAATTGAAATTTGACAACAGCTTTTACAAGAACTTGATGGATGGAAATGGGGTTTTGGAGTCAGACCAAAGACTTTGGAGCCACCCTTCAACCAGAGACATTGTAAAAAGATATGGTGGAAACTTAAGGGGATTGTTGGGCCTTAGATTTAGCTATGAGTTCAAGAAAGCTATGGTTAAGTTGAGTAGCATTGGTGTTAAGACTGGGACACAAGGGGAGATTAGAAAAGTTTGTTATCAGTTCAATAAGTAG 972 42.39 MMGYIWWNLVAILAMVLPVKSQLSVGFYSKSCPKAEFIVRSTVESYFKADPTIAAGLLRLHFHDCFVQGCDGSVLIMDENAEINAGPNMGLRGFEVVDDAKAKLENLCPGVVSCADILTLATRDAIDLSDGPSWSVPTGRRDGKVSISFDAEDLPSPFEPIDNHIQKFAEKGLTEEDLVTLVGAHTIGRTDCQLFSYRLQNFTSTGNADPTISTSFLTELRTLCPLDGDPFRGVAMDKDSQLKFDNSFYKNLMDGNGVLESDQRLWSHPSTRDIVKRYGGNLRGLLGLRFSYEFKKAMVKLSSIGVKTGTQGEIRKVCYQFNK* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16920108 16922938 - CsaV3_1G030170.1 Csa01g02009 516506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02009 323 PANTHER PEROXIDASE 7 320 - -
Csa01g02009 323 Gene3D - 26 322 - -
Csa01g02009 323 SUPERFAMILY Heme-dependent peroxidases 22 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 ProSiteProfiles Plant heme peroxidase family profile. 22 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Csa01g02009 323 Gene3D Peroxidase, domain 2 155 301 - -
Csa01g02009 323 CDD secretory_peroxidase 22 318 IPR033905 GO:0004601|GO:0042744
Csa01g02009 323 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 PANTHER PEROXIDASE 25-RELATED 7 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 Pfam Peroxidase 39 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02009 323 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02009 Csa-Chr1:16920108 Csa07g00538 Csa-Chr7:3952110 2.20E-129 dispersed
Csa01g02004 Csa-Chr1:16873513 Csa01g02009 Csa-Chr1:16920108 2.02E-06 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02009 K00430 - csv:101214998 652.899