Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02209 ATGAAGAAGAAGAAAGAAGTTATTGGGTTTTTGTTGGAAAATAGTGAAGAAATTGGGTATTTGCATTTGCTTCCAAAGCTATATTCATTGGTTTTGGTTGGAAGTGTTCTTGGGTTTGTTTTAATACAATTTGTAGCAATTGGAGCAATGGAGTGGAGATCATCAAATAATGGATTTAGTGGATTAAATTGGGTTGAGAAATTGATTGGGATTTTGTTTTTAAGTGTAAATTCAAGACATAGTGGTGAATCAACTGTTGATCTATCAACACTCTCTTCTGCCATATTGGTTCTCTTTGTTGCTATGATGTATCTTCCACCTTACACTTCTTTCATGCCAATAAAATCAATTGAAGAAGAAGAAAATGAAATGGAAGGCAATAGAAAAAGAAGATCAAGAACAAAAAGGGCAAAATTTATGGATAATTTTGTGTTTTCACAACTCTCTTATCTCATCATCTTCACCTTCATTATATGCATCACTGAGAGACATAATATGAAACAAGATCCTCTCAATTTCAATATTTTCAACATTGTTTTTGAAGTCATCAGTGCATATGGAAACGTGGGGTTTTCGATGGGATATAGCTGTGGAAGACGAGTTCATCCTCAAAGCAATTGTGTCGACAAGTCGTTTGGGTTTTCTGGAAAATGGAGCGACAATGGAAAGCTGGTTCTTATTGTCGTCATGATCTTTGGACGATTAAAGAAGTTTAATATGAATAGATCACAAAGAGCTTGGAAGCTTCTCTAA 753 34.4 MKKKKEVIGFLLENSEEIGYLHLLPKLYSLVLVGSVLGFVLIQFVAIGAMEWRSSNNGFSGLNWVEKLIGILFLSVNSRHSGESTVDLSTLSSAILVLFVAMMYLPPYTSFMPIKSIEEEENEMEGNRKRRSRTKRAKFMDNFVFSQLSYLIIFTFIICITERHNMKQDPLNFNIFNIVFEVISAYGNVGFSMGYSCGRRVHPQSNCVDKSFGFSGKWSDNGKLVLIVVMIFGRLKKFNMNRSQRAWKLL* 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19127936 19129641 - CsaV3_1G032170.1 Csa01g02209 516706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02209 250 Pfam Cation transport protein 5 236 IPR003445 GO:0006812|GO:0008324|GO:0055085
Csa01g02209 250 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 4 249 - -
Csa01g02209 250 Coils Coil 117 137 - -
Csa01g02209 250 PANTHER SODIUM TRANSPORTER HKT1 4 249 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02208 Csa-Chr1:19123153 Csa01g02209 Csa-Chr1:19127936 1.24E-72 tandem
Csa01g02209 Csa-Chr1:19127936 Csa01g02210 Csa-Chr1:19141577 8.13E-81 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02209 K24976 - csv:101204406 484.182