Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02243 ATGGCAGCCTCAAGCATGGCTCTATCCTCCCCCTCTTTCGCCGGAAAGGTGGTGAAACTCACCCCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACCATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCGGGTGACTATGGTTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTACTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA 798 52.01 MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19549853 19551179 + CsaV3_1G032510.1 Csa01g02243 516740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02243 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Csa01g02243 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Csa01g02243 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Csa01g02243 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Csa01g02243 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02243 Csa-Chr1:19549853 Csa06g03766 Csa-Chr6:29983572 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02243 K08912 - csv:101211276 539.265