Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02275 ATGGTAGTTGAAGATACGATCAAAGCTACATCGGCGGAAGATCTTTCTAATTCCATTGCTAATCAAAACCCTAGAGGACGTGGCGGTGAGGAAGATGAGGAACTTGAGGAAGGTGAGATCGTCGGCGATGACGACCTTGACTCCTCCAATTTGACCGCGGCCTTAGTTCATCAGCCTCACCCTCTTGAGCACTCTTGGACCTTTTGGTTTGATAACCCATCTGCCAAATCCAAGCAAGCCACCTGGGGTGCGTCTATGCGACCGATCTATACCTTCTCCACTGTCGAGGAGTTCTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTCAAACATAAAATTGAGCCTAAATGGGAAGATCCTGTTTGTGCGAGTGGAGGGAAGTGGACTGTGAACTTTTCAAGGGGAAAATCTGATAATGGCTGGTTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGACTGTGGTGATGAAATTTGTGGAGCAGTTGTTAATGTTAGATCTGGGCAGGATAAAATATCGATTTGGACAAAAAATGCTTCCAATGAAGCTGCGCAGGCGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTACAATGAGAGCATTGGCTTTATATTCCACGATGATGCAAAGAAATTTGATAGACATGCGAAGAATAAATATATGGTGTGA 708 44.35 MVVEDTIKATSAEDLSNSIANQNPRGRGGEEDEELEEGEIVGDDDLDSSNLTAALVHQPHPLEHSWTFWFDNPSAKSKQATWGASMRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHKIEPKWEDPVCASGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNESIGFIFHDDAKKFDRHAKNKYMV* 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19900405 19904086 + CsaV3_1G032830.1 Csa01g02275 516772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02275 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 3 235 - -
Csa01g02275 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 3 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Csa01g02275 235 SUPERFAMILY eIF4e-like 56 231 IPR023398 -
Csa01g02275 235 MobiDBLite consensus disorder prediction 1 37 - -
Csa01g02275 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 52 235 IPR023398 -
Csa01g02275 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Csa01g02275 235 MobiDBLite consensus disorder prediction 10 24 - -
Csa01g02275 235 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02275 Csa-Chr1:19900405 Csa02g01033 Csa-Chr2:10011592 2.24E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02275 K03259 - csv:101206312 468.388