Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02395 ATGGCGAAAACTCTTATCTCATCCTCACCTTTCGTCGGTTCTTCTCTCCCATCCCTTTCTCGCCATCTTCCTCTCCATACTCTTCCCCACCGGAGACACCTCACCACCAGAGTTAATTTCAGCTTCCATCAACTTCCCCCTGTCCATACCTTTCATTCTTCCCTCGATTTTCAAGCAATTGTTAGCAGAACCGAAGGCCTGCTCTATACACTTGCTGACGCTGCCGTTGCAGTGGATTCTACTCTTTCAGCTGCCGCTACTTCTACTTCTCCTGATACTGCGGTGCAGAAGAATGGTGGATGGTTTGGATTTATCTCCGATGCCATGGAAGTGGTTCTTAAAGTGTTGAAGGGTAGCCTTGAGGCTGTGCACATCCCGTATTCATATGGATTTGCAATTATTTTACTTACTATTATCGTTAAAGTTGCAACTTTTCCTCTAACTAAGCAGCAGGTTGAGTCAACATTGGCTATGCAAAATCTTCAACCGAAGATTAAAGCTATCCAACAAAGATATGCAGGCAATCAGGAAAGAATACAACTTGAGACATCACGGCTTTATAGGCAAGCAGGAGTTAACCCTTTGGCAGGCTGTTTCCCAACTTTAGCCACCATACCTGTTTGGATTGGCCTATATCAAGCTCTTTCTAATGTGGCAAATGAGGGATTACTGACTGAAGGTTTCTTTTGGATTCCTTCTCTTGGTGGACCAACTACTATTGCTGCTCGACAAAGTGGAGCTGGAATCTCTTGGTTGTTGCCTTTTGTGGATGGCCATCCACCATTGGGCTGGTCTGACACTGCAGCATACCTTGTATTACCTGTTCTCCTTGTCATATCTCAGTATGTATCGATGGAACTCATGAAGCCTCCCCAGACTGATGATCCAGCACAAAAGAACACACTTCTTATTTTCAAGTTTCTTCCCCTCATGATCGGTTACTTCTCATTGTCTGTTCCGTCTGGATTATCAATTTACTGGTTCACGAACAATGTTCTTAGCACGGCTCAGCAAGTATGGTTACGCAAATTAGGAGGTGCAAAGCCTGTTGTAAATGAGAATGCTCCTGGAATCATAACAGCTGGACGTGCCAAACGAACGCCTGAATCAGAAAGAACGGGTGACAGGTTTAGGCAAGTAAGGGAAGATGAGAAGAAGAATAAGTTAACCAAGGCAGCTCGATCAGAAGATATTCAAACTTTGGCTTCTGAGTCCGATACTGAGGATGGGTATGATGGGGAGACAACTGAGAAGGGTGAGGACGGTCTAGAAGAGGCATATGCATCAAGTGCAGACAAAGACGTCCCAGCCTATAATCGACAAAAGAGAAGCAAGCGATCAAAGAGGAAACGTGCAGTATGA 1362 44.86 MAKTLISSSPFVGSSLPSLSRHLPLHTLPHRRHLTTRVNFSFHQLPPVHTFHSSLDFQAIVSRTEGLLYTLADAAVAVDSTLSAAATSTSPDTAVQKNGGWFGFISDAMEVVLKVLKGSLEAVHIPYSYGFAIILLTIIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLLPFVDGHPPLGWSDTAAYLVLPVLLVISQYVSMELMKPPQTDDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNENAPGIITAGRAKRTPESERTGDRFRQVREDEKKNKLTKAARSEDIQTLASESDTEDGYDGETTEKGEDGLEEAYASSADKDVPAYNRQKRSKRSKRKRAV* 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 21246901 21253629 - CsaV3_1G034030.1 Csa01g02395 516892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02395 453 PANTHER OXA1 1 447 IPR001708 GO:0016021|GO:0032977
Csa01g02395 453 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 447 - -
Csa01g02395 453 Pfam 60Kd inner membrane protein 129 343 IPR001708 GO:0016021|GO:0032977
Csa01g02395 453 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 128 342 IPR028055 -
Csa01g02395 453 MobiDBLite consensus disorder prediction 365 393 - -
Csa01g02395 453 MobiDBLite consensus disorder prediction 358 453 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02395 Csa-Chr1:21246901 Csa02g01790 Csa-Chr2:17308421 1.20E-140 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02395 K03217 - csv:101217620 812.757