Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g02499 | ATGGCTAACGACGACGTTTTCCCCTTCCTCCCTCTTTTCCTCTTTCTCATTCTCACTTACTTCATTTGGTTCCATTTCCTCGCCCGTAAACTCACCGGTCCAACCGTCTGGCCGCTCATTGGCAGCCTCCCGGCTCTCATCTCCAACCGCCGCAGCCTCCACGACTGGATCGCCGGGAACCTCCGCGCCACAGGCGGCGCTGCCACTTACCAAACTTGCACGGTAGCACTTCCCTTCATTGCTAAAAAACAAGGATTTTACACTGTCACCTGCCATCCTAGAAACATCGAGCACGTGCTTCGAACCCGGTTCGAAAATTACCCGAAAGGACCGGATTGGCAAGCGGCTTTTCACGATTTGTTAGGCCAAGGGATTTTCAATAGCGACGGAGAAATTTGGCTGATTCAACGGAAGACGGCGGCGCTTGAGTTCACCACGAGGACCCTCCGGCAAGCGATGGACCGGTGGGTGAATAGGACGATAAGGACACGGTTGTGGTGTATATTGGAGAAAGCGGCGGAGTATAAGACGGCGGTGGATTTACAGGATTTGTTACTCCGATTAACATTTGATAATATTTGTGGACTGACTTTTGGGAAAGACCCACAAACATTGTCGCCGGAGTTGCCGGCTAACCCGTTTGCTTTGGCGTTTGATACCGCCACTGAAGCCACTCTTCAGCGCCTTCTTTACCCTGGTCTTTTATGGAGGTTGGAGAAGGTTTTGGGCATTGGAATGGAAAGAAGGTTGAAGAAGAGTTTGAAAGTAGTTGAAGAATACATAAACGACGCCGTTGCAGCCCGTAATAAAGAATCTCCCTCCGACGACTTATTATCCCGCTTCATGAAGAAACGCGACGACGACCGCTTCTCCTCCGCCGTCCTCCACCGTATTGCCTTAAACTTCGTCCTCGCCGGTCGTGACACCTCTTCCGTGGCGCTCACCTGGTTCTTTTGGCTCGTAATGAACCACCCACACGTGGAGGAAAAAATCCTCTCTGAAATCTCGACCGTCCTCCGCCAGACACGTGGCGACGACATCCGCCGTTGGATCGAAGAGCCGTTGGTATTCGACGAAGCCGATAAATTGGTGTACTTAAAAGCCGCGTTGGCTGAAACGCTGCGTTTATACCCTTCCGTACCGGAGGATTTCAAGTATGTCGTGGCTGATGACGTGTTACCAGATGGTACTTTCGTGCCAGCTGGTTCGACCGTGACGTATTCGATTTATTCTGTTGGGAGGATGAAGAGTATTTGGGGGGAGGATTGTACGGAGTTTAAACCGGACCGGTGGTTGTCTCCGACCGGAGACCGATTCGAGGGGCCTAAAGATGCTTATAAGTTTGTGGCGTTTAACGCTGGACCGAGGACTTGTTTGGGCAAGGATTTAGCTTATTTGCAAATGAAGTCCGTTGCCTCGGCCGTACTCCTTCGGTATCGGCTATCTCCAGTTCCCGGCCACCGGGTGGAACAGAAAATGTCTCTTACTCTTTTTATGAAGAATGGACTTCGGGTTTATTTACATCCTCGTCGGCTCGGCTAA | 1542 | 51.3 | MANDDVFPFLPLFLFLILTYFIWFHFLARKLTGPTVWPLIGSLPALISNRRSLHDWIAGNLRATGGAATYQTCTVALPFIAKKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILEKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPELPANPFALAFDTATEATLQRLLYPGLLWRLEKVLGIGMERRLKKSLKVVEEYINDAVAARNKESPSDDLLSRFMKKRDDDRFSSAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEEKILSEISTVLRQTRGDDIRRWIEEPLVFDEADKLVYLKAALAETLRLYPSVPEDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCTEFKPDRWLSPTGDRFEGPKDAYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLG* | 514 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 22072491 | 22075066 | + | CsaV3_1G036060.1 | Csa01g02499 | 516996 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g02499 | 513 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | Gene3D | Cytochrome P450 | 27 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | SUPERFAMILY | Cytochrome P450 | 22 | 510 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | Pfam | Cytochrome P450 | 88 | 500 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g02499 | 513 | PANTHER | CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE | 15 | 511 | - | - | |
Csa01g02499 | 513 | PANTHER | CYTOCHROME P450 | 15 | 511 | - | - | |
Csa01g02499 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g02499 | Csa-Chr1:22072491 | Csa05g00271 | Csa-Chr5:1665164 | 0 | dispersed | |
Csa01g02499 | Csa-Chr1:22072491 | Csa06g00061 | Csa-Chr6:403217 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g02499 | K15401 | - | csv:101214516 | 1026.93 |