Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02542 ATGGTTGACAATGGCGAAGAAAAGTTGCTGGCTATGGCTCGCCACATAGCCAAGACCATGGGTCGCAACGAGTCCATGGCCGATGATATTCTCCAGATATTCTCCAATTTTGATGCTAGGTTTTCCCTCGAGAAGCTTTCTGATAAACCCGATGAGCTTGATCCCAGAGCCCCCACCGCGTTACAGCGCTCTCTCAAGTCTTTAGACCGCCGGATCTCCCAATACTTGGCTGCCGACCATCCCATTTGGGCTGATTCCGCTGATTCCTCTGCTTTTCTCGACTCTATTGATGAGTTGATGGGTATCATTAGGGACTGGGCTCCTATGGCTAGGGATAAGTCTGTTGCTTCCTATCTTGCTCGTGCTGACGATCTGATGCAGCAGGCTATGTTCCGTGTCGACCAAGAGTTCCGGTCGTTGATGGACCGTGGAGGTGAGTCTTTTGAATTGACGCGCCATTTCAGGAACGGTGAGTCAACGGGGGATTTCTGCTTTGATTCTGAGGAAGATGAGGAAGTTGCGGAAGGAATTCTGGGCGATGGCGATGGTATTCAGATCCCTGTGGCCCAGCCGGTGACGGATTACAACATCCTTATTGATGCGCTTCCGTCCGGGACTATCAACGATCTCCATGAAATAGCGAAGCGTATGGTAGCGGCTGGGTTTGAGAAAGAGTGTTCACATGCTTATAGTAGCTGCAGGAGGGAGTTCTTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTGAGCATCGATGAAGTTCAAAAGATGCAATGGCAAGACCTCGAAGAGGAAATTGAGCGGTGGATGAAAGCGATTACCCTCTCTCTTCGAATTCTCTTCCCAAGCGAACGACGCCTATGTGAACGTGTCTTCGTCGGCCTCTCCACCACCGCGGATCTTTCTTTCATGGAAGTCTGCCGTGGATCCACTATTCAGCTATTGAATTTTGCAGATGCGGTGGCAATTGGCTCCCGCGCGCCGGAACGATTGTTCAAAATCCTCGATATGTTCGAGACCTTGAGAGACTTGATGCCGGAGTTCGACTCGGTATTTTCAGATCAGTACTGCTTGTTGCTTAGAAATGAAGCAATTACAATCTGGAAAAGGTTAGGCGGGACAATCAAAGGGATTTTCATGGAGCTCGAGAATTTGATCCGCCGTGATCCGGCTAAAACTCCAGTCCCTGGGGGTGGTCTTCATCCAATTACTCGATATGTGATGAATTACCTTAAAGCAGCTTGCAAATCCCGGCAGACTTTGGAGCAAGTTTTTGACGAACCTGCCCTTCCTTCTAAGGATTACACCAAGTTCGACGACAGAGCAGCAGCATCGTCTTCCTTATCTGTTCAAATGGACTGGATTATGGAGCTTTTAGAGAGCAATTTAGAAGCAAAGTCGAAAATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGGAGATACATTGTTCAGAAAGTGAAAGACAGTGAACTAGGATCCGTTTTAGGAGACGATTGGATTCGAAAACACTCGGTTAAGAACCGACAATACCTCGGAAACTACCTGAAAAGCTCATGGAGCAAGGTGGTGGGAGCATTGAAAATGGACAGTGGCACTTTAGCTCCTTCGGCGATGAAGGAGAAGCTTCAATCATTCAATATGCAGTTCGAAGAAATCTGCCAAACCCAATCCACATGGGTGATATTTGAGAATCAGCTGAGAGAGGAAACAAGAATCTCAGTTGCCAAAATCCTTTTGCCAGCATATCAAAAGTTCATAGGAAGGTACCAGAGTTTGCCGGAGTTGGCCAAGCGTACAGATCGGTATTTGAAGTACACTGCAGAGGAAATGGAGAGTCGAATCACGGAGCTGTTCGAAGGCGGCAGCTCAGGCAGTGGAAGGAGGTAA 1905 47.87 MVDNGEEKLLAMARHIAKTMGRNESMADDILQIFSNFDARFSLEKLSDKPDELDPRAPTALQRSLKSLDRRISQYLAADHPIWADSADSSAFLDSIDELMGIIRDWAPMARDKSVASYLARADDLMQQAMFRVDQEFRSLMDRGGESFELTRHFRNGESTGDFCFDSEEDEEVAEGILGDGDGIQIPVAQPVTDYNILIDALPSGTINDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSIDEVQKMQWQDLEEEIERWMKAITLSLRILFPSERRLCERVFVGLSTTADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMPEFDSVFSDQYCLLLRNEAITIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLKAACKSRQTLEQVFDEPALPSKDYTKFDDRAAASSSLSVQMDWIMELLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGDDWIRKHSVKNRQYLGNYLKSSWSKVVGALKMDSGTLAPSAMKEKLQSFNMQFEEICQTQSTWVIFENQLREETRISVAKILLPAYQKFIGRYQSLPELAKRTDRYLKYTAEEMESRITELFEGGSSGSGRR* 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22413699 22416955 - CsaV3_1G036490.1 Csa01g02542 517039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02542 634 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 625 - -
Csa01g02542 634 SUPERFAMILY Cullin repeat-like 83 625 IPR016159 -
Csa01g02542 634 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 625 IPR004140 GO:0000145|GO:0006887
Csa01g02542 634 Pfam Exo70 exocyst complex subunit 268 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Csa01g02542 634 Gene3D Exocyst complex component Exo70 82 634 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02542 Csa-Chr1:22413699 Csa05g01620 Csa-Chr5:19199254 4.46E-128 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02542 K07195 - csv:101204511 1222.99