Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02591 ATGTTACAACACCTTCCCCCAGAATCAGACGCTCTTAATTCCAATTCCAGCCAAAATTCTATGAGCAGCGAGAGTTGTAGTAGCTTCAGTCGTCTTTCATTTGATGCAGCCATTGATTTACCCACTTCCCGATCTTCACCCGCCAGTCTCCATTTAAAGCCACATCGTTCATCTGATTTCGCTTACTCCGCTATTCGTCGTCGCAAATCTAAACTCACGTTTCGTGATTTTCGACTTCTCCGTCGGATTGGTGCTGGAGACATTGGTACTGTTTATTTGTGTCAGTTGAGGAACTTGAGTAAAGGGTGTTGTTACGAAGACGAAGATGATGAAGATGACGACGTCGACGACGAGGATGATGATGATGATGATGTTTCGTGTTTGTATGCGATGAAAGTTGTGGATAAAGACGCGTTGGAATTGAAGAAGAAAGTTCAGAGAGCGGAAATGGAAAGGAAAATATTGAAGATGCTTGATCATCCGTTTTTGCCTACACTTTACGCTGAGTTTGAAGCTTCTCATTTCTCTTGTATTGTTATGGAGTTTTGTTCTGGTGGGGATTTGCATTCTCTCCGCCATAAACAGCCACGGAAACGCTTCTCTCTCACCTCCGCTAGGTTTTATGCAGCGGAAGTTCTTGTTGCTTTAGAGTACCTTCATATGCTTGGAATCATTTACAGAGACCTTAAACCGGAGAATGTACTCGTCCGATCAGACGGTCACATTATGTTATCGGATTTTGATTTATCTCTCTGTTCCGACGCCACCCCTGCCGTTGAATCACCCAACTCTTCCCCCAACACGGCATTTCACGAATCAACGGCGTACCCCAAAACCAACGTTGCCGTTTCCGCCGCCTCCGCAGCTCCTTTTTCCTGCCTATACAACCGACTTTTCCGGTCGAGGAAGGTCCAAACTCTGTCTCCCAACTGGCTCTTCGTCGCTGAGCCCGTTTCCGCTAGGTCCTGCTCCTTCGTAGGTACTCACGAGTACGTCTCGCCGGAAGTTGCCGCCGGCGGATCTCACGGTAACGCCGTGGACTGGTGGGCCTTTGGAATATTTCTCTACGAGTTGATCTACGGCCGGACGCCGTTTGCGGCTTCGTCGAACGAGACGACGTTAAGAAGCATTATAAAGAAACCGTTGACGTTTCCCACAGCCGTGCCGTCTGGCGCGCTTGAACACCACGCGCGGGACCTCATATCCGGTTTACTGAACAAGGACCCGACCCGGAGACTGGGGTCGAAACGCGGGTCCGCCGACATCAAGAAGCATCCATTCTTCAAAGGCCTCAACTTTGCGTTAATTCGATCCCTCACTCCTCCGGAAATCCCCGGGGTGCGACGGCGGAAGGCGACCCCAGCTCCGGTGGCGAAAACTAAGGATCAGAAGTCCGGTCAGTCGACCGGGTTCGATTATTTCTGA 1425 49.82 MLQHLPPESDALNSNSSQNSMSSESCSSFSRLSFDAAIDLPTSRSSPASLHLKPHRSSDFAYSAIRRRKSKLTFRDFRLLRRIGAGDIGTVYLCQLRNLSKGCCYEDEDDEDDDVDDEDDDDDDVSCLYAMKVVDKDALELKKKVQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPRKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESPNSSPNTAFHESTAYPKTNVAVSAASAAPFSCLYNRLFRSRKVQTLSPNWLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWAFGIFLYELIYGRTPFAASSNETTLRSIIKKPLTFPTAVPSGALEHHARDLISGLLNKDPTRRLGSKRGSADIKKHPFFKGLNFALIRSLTPPEIPGVRRRKATPAPVAKTKDQKSGQSTGFDYF* 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22880655 22883406 - CsaV3_1G036980.1 Csa01g02591 517088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02591 474 MobiDBLite consensus disorder prediction 445 474 - -
Csa01g02591 474 Coils Coil 131 158 - -
Csa01g02591 474 MobiDBLite consensus disorder prediction 8 24 - -
Csa01g02591 474 SUPERFAMILY Protein kinase-like (PK-like) 56 444 IPR011009 -
Csa01g02591 474 Gene3D Transferase(Phosphotransferase) domain 1 322 446 - -
Csa01g02591 474 Gene3D Phosphorylase Kinase; domain 1 75 182 - -
Csa01g02591 474 Gene3D Transferase(Phosphotransferase) domain 1 183 250 - -
Csa01g02591 474 ProSiteProfiles Protein kinase domain profile. 77 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa01g02591 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Csa01g02591 474 Pfam Protein kinase domain 126 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa01g02591 474 Pfam Protein kinase domain 322 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa01g02591 474 SMART serkin_6 77 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa01g02591 474 MobiDBLite consensus disorder prediction 1 24 - -
Csa01g02591 474 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 14 457 - -
Csa01g02591 474 PANTHER FLIPPASE KINASE 1-RELATED 14 457 - -
Csa01g02591 474 MobiDBLite consensus disorder prediction 460 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02591 Csa-Chr1:22880655 Csa02g00174 Csa-Chr2:1214591 2.16E-132 dispersed
Csa01g02591 Csa-Chr1:22880655 Csa01g01551 Csa-Chr1:11109475 5.60E-132 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77834 PF00069 Pkinase 1.50E-29 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02591 - - csv:101208129 883.634