Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g02591 | ATGTTACAACACCTTCCCCCAGAATCAGACGCTCTTAATTCCAATTCCAGCCAAAATTCTATGAGCAGCGAGAGTTGTAGTAGCTTCAGTCGTCTTTCATTTGATGCAGCCATTGATTTACCCACTTCCCGATCTTCACCCGCCAGTCTCCATTTAAAGCCACATCGTTCATCTGATTTCGCTTACTCCGCTATTCGTCGTCGCAAATCTAAACTCACGTTTCGTGATTTTCGACTTCTCCGTCGGATTGGTGCTGGAGACATTGGTACTGTTTATTTGTGTCAGTTGAGGAACTTGAGTAAAGGGTGTTGTTACGAAGACGAAGATGATGAAGATGACGACGTCGACGACGAGGATGATGATGATGATGATGTTTCGTGTTTGTATGCGATGAAAGTTGTGGATAAAGACGCGTTGGAATTGAAGAAGAAAGTTCAGAGAGCGGAAATGGAAAGGAAAATATTGAAGATGCTTGATCATCCGTTTTTGCCTACACTTTACGCTGAGTTTGAAGCTTCTCATTTCTCTTGTATTGTTATGGAGTTTTGTTCTGGTGGGGATTTGCATTCTCTCCGCCATAAACAGCCACGGAAACGCTTCTCTCTCACCTCCGCTAGGTTTTATGCAGCGGAAGTTCTTGTTGCTTTAGAGTACCTTCATATGCTTGGAATCATTTACAGAGACCTTAAACCGGAGAATGTACTCGTCCGATCAGACGGTCACATTATGTTATCGGATTTTGATTTATCTCTCTGTTCCGACGCCACCCCTGCCGTTGAATCACCCAACTCTTCCCCCAACACGGCATTTCACGAATCAACGGCGTACCCCAAAACCAACGTTGCCGTTTCCGCCGCCTCCGCAGCTCCTTTTTCCTGCCTATACAACCGACTTTTCCGGTCGAGGAAGGTCCAAACTCTGTCTCCCAACTGGCTCTTCGTCGCTGAGCCCGTTTCCGCTAGGTCCTGCTCCTTCGTAGGTACTCACGAGTACGTCTCGCCGGAAGTTGCCGCCGGCGGATCTCACGGTAACGCCGTGGACTGGTGGGCCTTTGGAATATTTCTCTACGAGTTGATCTACGGCCGGACGCCGTTTGCGGCTTCGTCGAACGAGACGACGTTAAGAAGCATTATAAAGAAACCGTTGACGTTTCCCACAGCCGTGCCGTCTGGCGCGCTTGAACACCACGCGCGGGACCTCATATCCGGTTTACTGAACAAGGACCCGACCCGGAGACTGGGGTCGAAACGCGGGTCCGCCGACATCAAGAAGCATCCATTCTTCAAAGGCCTCAACTTTGCGTTAATTCGATCCCTCACTCCTCCGGAAATCCCCGGGGTGCGACGGCGGAAGGCGACCCCAGCTCCGGTGGCGAAAACTAAGGATCAGAAGTCCGGTCAGTCGACCGGGTTCGATTATTTCTGA | 1425 | 49.82 | MLQHLPPESDALNSNSSQNSMSSESCSSFSRLSFDAAIDLPTSRSSPASLHLKPHRSSDFAYSAIRRRKSKLTFRDFRLLRRIGAGDIGTVYLCQLRNLSKGCCYEDEDDEDDDVDDEDDDDDDVSCLYAMKVVDKDALELKKKVQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPRKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESPNSSPNTAFHESTAYPKTNVAVSAASAAPFSCLYNRLFRSRKVQTLSPNWLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWAFGIFLYELIYGRTPFAASSNETTLRSIIKKPLTFPTAVPSGALEHHARDLISGLLNKDPTRRLGSKRGSADIKKHPFFKGLNFALIRSLTPPEIPGVRRRKATPAPVAKTKDQKSGQSTGFDYF* | 475 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 22880655 | 22883406 | - | CsaV3_1G036980.1 | Csa01g02591 | 517088 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g02591 | 474 | MobiDBLite | consensus disorder prediction | 445 | 474 | - | - | |
Csa01g02591 | 474 | Coils | Coil | 131 | 158 | - | - | |
Csa01g02591 | 474 | MobiDBLite | consensus disorder prediction | 8 | 24 | - | - | |
Csa01g02591 | 474 | SUPERFAMILY | Protein kinase-like (PK-like) | 56 | 444 | IPR011009 | - | |
Csa01g02591 | 474 | Gene3D | Transferase(Phosphotransferase) domain 1 | 322 | 446 | - | - | |
Csa01g02591 | 474 | Gene3D | Phosphorylase Kinase; domain 1 | 75 | 182 | - | - | |
Csa01g02591 | 474 | Gene3D | Transferase(Phosphotransferase) domain 1 | 183 | 250 | - | - | |
Csa01g02591 | 474 | ProSiteProfiles | Protein kinase domain profile. | 77 | 428 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g02591 | 474 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 224 | 236 | IPR008271 | GO:0004672|GO:0006468 | |
Csa01g02591 | 474 | Pfam | Protein kinase domain | 126 | 252 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g02591 | 474 | Pfam | Protein kinase domain | 322 | 428 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g02591 | 474 | SMART | serkin_6 | 77 | 428 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa01g02591 | 474 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Csa01g02591 | 474 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 14 | 457 | - | - | |
Csa01g02591 | 474 | PANTHER | FLIPPASE KINASE 1-RELATED | 14 | 457 | - | - | |
Csa01g02591 | 474 | MobiDBLite | consensus disorder prediction | 460 | 474 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g02591 | Csa-Chr1:22880655 | Csa02g00174 | Csa-Chr2:1214591 | 2.16E-132 | dispersed | |
Csa01g02591 | Csa-Chr1:22880655 | Csa01g01551 | Csa-Chr1:11109475 | 5.60E-132 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77834 | PF00069 | Pkinase | 1.50E-29 | CL0016 | Csa | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g02591 | - | - | csv:101208129 | 883.634 |