Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02633 ATGGATAATGGTGATATTGAGAGTGGGGAAGAGGAATTTCATGGTCAGAGGGGTAGGAAGTATCGTCCTGTTGAAGCCCATGATCGTGCTGTTCTTGAAATGTCTTCTATGGATCCGGGTTCCTCTTCTTCCTCTTCCTCTGTTCCACCCATACGCCATCCTTCTCTCAAGAAGGTAAAAGTGGGCTCTCAGACAGGTACTGAAAAAGAAGGGAACTCTCCTACTCGTATTGACGTCAATGGCCCCCAGCGAGAATCGAAACTGGAGTTTTTTGGTTTTGATTCTCTTGTTAATATTCTTGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCGCCTTCTAGTCCTCGGGATGGTGAGAATGTTTCTATGACTCAAGGGTTGCCAAAGACCAATGAAGTCAAATCAGGTACATTGATGGGTGTATTTATCCCATGCTTACAGAACATATTGGGAATCATTTACTATATTCGATTTTCTTGGATCGTTGGGATGGCTGGCATTGGTGAGTCATTAGTACTGGTGGCGTTTTGTGGTTTATGTACGTTCTTGACTTCGATTTCACTAAGTGCTATTGCAACTAATGGTGCTATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTCCTCGGAAATGCAGTTGCTGGCGCTCTTTATGTGTTGGGAGCTGTTGAAACATTTTTGAATGCTGTACCAGCTGCAGGGATATTCAGAGAGACTGTAACAAAAGTTAATGGAACAACCGTCGAGCCAATACAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATTGTGACTATTCTTCTGTGCTTCATTGTGTTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTGATTCCAGTCTTGTTTTCAGTACTTTGCATATTTCTTGGAGTTTTTCTGGCAGGAAAAAACGACCCTACAGAGGGTGTCACAGGCTTGAGCTTGGAATCTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACCAACAGTGCTGGAATTCCTGATCCTCTAGGAAAAGTATATTGGAATTTCAATGCATTGGTTGGGCTGTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGATCAGCTTCACTGAAGGATACTCAGCGTTCAATTCCCATTGGAACATTGGCTGCAACTTTAACAACAACTGTAATGTATCTGGTCTCTGTTTTGCTGTTTGGAGCACTGGCAACCAGAAAGAAATTGTTGACGGATAGGCTTCTTACCGCCACGGTTGCTTGGCCTTTCCCAGCAATTATTTATGTTGGAATTATTTTATCAACTCTTGGAGCTGCCCTTCAGAGCCTGACAGGAGCCCCTCGCTTACTAGCAGCCATAGCCAATGATGATATATTGCCTATCCTAAACTATTTTAAAGTAGCAGATGGCAGCGAGCCATACTTTGCAACCCTCTTTACTGCATTTCTCTGCATCGGATGTGTCATAATTGGGAATCTTGATCTTATCACACCAACTGTAACCATGTTTTTCTTACTGTGTTATGCTGGTGTTAACTTATCCTGCTTCCTTTTGGATTTACTAGACGCTCCCAGTTGGCGTCCACGTTGGAGATTCCATCACTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCGTGGTCGTTCACGATAGTGTCTTTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGTAAGGCTGGAGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTCCGTAGTCTTCGTTCCCTTGGAGCGAGCCAAGTTCACCCAAAGAATTGGTATCCCATTCCCTTGATATTTTGCCGGCCGTGGGGAAAGCTGCCGGAAAATGTACCCTGTCACCCTAAACTTGCAGACTTTGCTAACTGCATGAAGAAAAAAGGCCGTGGTATGTCCATATTTGTTTCCATTTTAGATGGAGATTACCATGAACGAGTTGAAGATGGAAAAGCTGCCTGCAAGCAGCTTGCTACCTATATTGATTACAAACGTTGTGAAGGTGTGGCAGAGATCGTTGTGGCTCCCACAATGTCTGAAGGTTTCCGAGGGATCGTTCAGACAATGGGTCTTGGAAATCTCAAGCCGAATATTGTAGTCATGCGATACCCTGAAATATGGCGTCGTGAAAATCTAATAGAAATTCCGGCTACGTTTGTTGGAATTATCAATGACTGCATTGATGCTAACAAGGCAGTTGTGATTGTTAAGGGTCTGGATGAATGGCCAAATGAATTTCAAAGGCAATATGGAACTATAGATTTGTACTGGATTGTGAGAGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGAGCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATAGCAGAGGAGGATTCCGACGCCGAGGGCCTGAAAGCTGACGTCAAAAAGTTTTTGTATGATCTACGAATGCAAGCTGAGGTGATTGTTATAACGATAAAATCATGGGACACACAAGTGGAGGGCGGGCAACAAGACGAATCGATGGAAGCCTTCACCGCCGCCCAAGGAAGGATTGCTAGTTATTTAAGTGAAATGAAGGAAACAGCTGAGAGCAGAGGAACCACACTCATGGCTGACGGCAAGCCTGTTAGTGTGAATGAGCAGCAGGTCGAGAAGTTTCTAAATACAACTCTTAAGTTGAACTCAACAATCCTGAGATACTCAAGGATGGCTGCAGTCGTGCTTGTCAGTCTCCCGCCACCCCCTGTCAACCATCCTGCATACTTCTATATGGAGTACTTGGATTTGTTGGTTGAGAATGTGCCTAGGCTCTTGATCGTAAGAGGATACCGTCGAGATGTCGTAACTTTGTTCACTTAG 2946 43.96 MDNGDIESGEEEFHGQRGRKYRPVEAHDRAVLEMSSMDPGSSSSSSSVPPIRHPSLKKVKVGSQTGTEKEGNSPTRIDVNGPQRESKLEFFGFDSLVNILGLKSMMGEQIQAPSSPRDGENVSMTQGLPKTNEVKSGTLMGVFIPCLQNILGIIYYIRFSWIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLNAVPAAGIFRETVTKVNGTTVEPIQSPSSHDLQVYGIIVTILLCFIVFGGVKMINRVAPAFLIPVLFSVLCIFLGVFLAGKNDPTEGVTGLSLESFKENWSSDYQMTNSAGIPDPLGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTVMYLVSVLLFGALATRKKLLTDRLLTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPYFATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDGKAACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLIEIPATFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQVEGGQQDESMEAFTAAQGRIASYLSEMKETAESRGTTLMADGKPVSVNEQQVEKFLNTTLKLNSTILRYSRMAAVVLVSLPPPPVNHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLFT* 982
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23299587 23313682 - CsaV3_1G037400.1 Csa01g02633 517130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02633 981 MobiDBLite consensus disorder prediction 36 51 - -
Csa01g02633 981 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 13 980 - -
Csa01g02633 981 Pfam Solute carrier family 12 650 771 IPR018491 GO:0006811|GO:0016020|GO:0022857
Csa01g02633 981 Pfam Solute carrier family 12 781 980 IPR018491 GO:0006811|GO:0016020|GO:0022857
Csa01g02633 981 MobiDBLite consensus disorder prediction 8 32 - -
Csa01g02633 981 MobiDBLite consensus disorder prediction 1 81 - -
Csa01g02633 981 TIGRFAM 2a30: K-Cl cotransporter 68 981 IPR004842 GO:0006811|GO:0015377|GO:0016021
Csa01g02633 981 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 13 980 IPR004842 GO:0006811|GO:0015377|GO:0016021
Csa01g02633 981 MobiDBLite consensus disorder prediction 60 80 - -
Csa01g02633 981 Gene3D Amino acid/polyamine transporter I 134 598 - -
Csa01g02633 981 Pfam Amino acid permease 141 616 IPR004841 GO:0016020|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02633 K14427 - csv:101216218 1887.46