Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02705 ATGAGCACTGATTTTTCTAAAAAATCTATTTACAATGTTCATAGACCGATATGGATAGTGCTAATCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATCAGGAATTGTGTCTATCGTAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACAGGAATTCTAAGTAACAGAGCTGAAGACAATCCTGATTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCTATGGAAGCATTGAAGGCCGAGGGAATGCGGTTTGCTAAACAGGCCTTGCTTTCTGGATGCTCCGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAATTCAGAGAATTATTTCCAAGAACTACTAAAGTAAAATGTCTGAGTGATGCTGGGTTATTCCTTGATGTGGCTGATATATCTGGAGGGCACTTTATTAGAAACTTATTTGGAGGTGTGGTGGGCTTGCAGGGAGCAGGAAGAAATTTGCCATCCTTTTGTATGAGCCATCTTGATCCAACTTCGTGTTTCTTCCCACAAAATATAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAATGCAGCATACGATTCCTGGCAGATACAATCCAGTTTAGCCCCACCTTCCCTGGATCCAGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCGAAATGTAACCAACCCCAGATTCAATTTCTTCAAGGATTCAGAAACCAAATGTTGAATGCTGTTAGCGATTTCTCAAAATCCTCTGAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGACACATGGTTTGGCGACAATTCTCCTGTCATTGGAAACAAGCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGATCGAGCAGCAGTGAAAGCAATTGATTGTCCCTATCCCTGTGACAGGACGTGCCACCATCTGGTTTTTAGAAGCGGTTAG 1122 42.51 MSTDFSKKSIYNVHRPIWIVLICLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEDNPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALKAEGMRFAKQALLSGCSAGGLASILHCDEFRELFPRTTKVKCLSDAGLFLDVADISGGHFIRNLFGGVVGLQGAGRNLPSFCMSHLDPTSCFFPQNIIAGIRTPLFLVNAAYDSWQIQSSLAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVSDFSKSSENGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLVFRSG* 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23992099 23997184 + CsaV3_1G038210.1 Csa01g02705 517202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02705 373 Pfam Pectinacetylesterase 22 350 IPR004963 GO:0016787
Csa01g02705 373 PANTHER PECTIN ACETYLESTERASE 2 22 371 - -
Csa01g02705 373 PANTHER NOTUM-RELATED 22 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02705 Csa-Chr1:23992099 Csa04g00705 Csa-Chr4:4777839 1.51E-152 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02705 K19882 - csv:101218273 748.043