Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02791 ATGGCATTCTCTATCACCTTCTTCAAATCCTCCGCTCTCTTTCTCACCATTCTCTCTGTTTTCATCTTCTTCGTCCTCTTCACTCCCTATCCCTCGCCGGAATCCCCCTCCAGAAGGTCCCTCATCGCCACCGGCGATTCCAATTCCAGTTTCTCTCCGACCCCATCTTGTTCCTCTGTTGAATCTCACTCTGATGGCCTTATTAACTACTTATATTTCCATTTTTGCTTCTTCGATGAAAACCCATCTCTCTCTGTCCCTTTTCTCACTCTCTTTCTTCTCCTCCATTTCTACATCCTCATCAAAACCGCTCAAGATCACTTCTCCATTGTCACTTCCAAGCTCGCCTTTCACCTTAACTTGTCTCCCAGTATGGCTGCTGTGACGCTCTTGGCTTTGGGTAATGGCGCTCCTGATGTGTTTGCATCTGTTGCTGCGGTTCGTGGTGGCCAGTATCGAACTGGGTTTGGTGCAATTCTCTCTGCCGGCACGTTTGTTTCGGCTTTTGTTGTTGGGTTTGTGGCTATTTATGCTGCTCCGTTTTCGGTGAATCCGGCTCAGTTTGTGAGGGATGTGTTGTTCTATTTGACTGCAGCATTGTTTTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCTTGTGGCAAGCTGTTGGGTTTGTTGGGTTTTATTTGTTCTTTGTTGGATTGGTGTTTTGGATGGATTTGAGAATGGGAAGTGGGAAAGCTAAGAGTGGGGGTGATATGGGAGTGACTAGAGAAGCTGATGTCTTCCATGGTGACTTGCCTAAAGACTGTGAGATTGGAGAAGGCTACAGAAATGCAGATGAAGGAAAAACCAATTCTGGATTTTGGAAAGCTCTTCGAATGATCCGAAAAGCATGGGAAGCTCCTGTTTCATTTCTTCTGAAGCTCACCATTCCCCAACCTGCACCTTCTGAATGGAGCAGACTCTTTGCATCGGCGAACATTTCTCTCTGTCCTGTTGCGCTTCTATTTGCCTGTAACTCATTCATGTCATTTAATCATCCCATTGCTTTCCTCTTACCAAATACGCATTTACCACTTTGCATTTGTCATGAGTGTATTTTGGATTTCGACCATTGCTGGGGAGCTGCTGAACTGTCTTGCAGTTCTTGGAGTGCTTCTTAA 1149 45.34 MAFSITFFKSSALFLTILSVFIFFVLFTPYPSPESPSRRSLIATGDSNSSFSPTPSCSSVESHSDGLINYLYFHFCFFDENPSLSVPFLTLFLLLHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLRMGSGKAKSGGDMGVTREADVFHGDLPKDCEIGEGYRNADEGKTNSGFWKALRMIRKAWEAPVSFLLKLTIPQPAPSEWSRLFASANISLCPVALLFACNSFMSFNHPIAFLLPNTHLPLCICHECILDFDHCWGAAELSCSSWSAS* 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24583006 24587546 - CsaV3_1G039070.1 Csa01g02791 517288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02791 382 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 55 239 - -
Csa01g02791 382 Gene3D - 121 251 IPR044880 -
Csa01g02791 382 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 284 358 - -
Csa01g02791 382 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 55 239 - -
Csa01g02791 382 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 284 358 - -
Csa01g02791 382 Pfam Sodium/calcium exchanger protein 91 231 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02791 Csa-Chr1:24583006 Csa01g02998 Csa-Chr1:26189465 1.99E-20 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02791 K13754 - csv:101209909 653.669