Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02820 ATGGCTGGAACTAATCAAATCAATCTCAACGAAGCTAGGATGGTGGTTCCACTAAATACCTGGGTTCTCATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGACCTGATGGGACCTTCAATCGCCATTTGGCAGAGTTTCTCGACCGAAAAGTCCCCGCGAATGCTAATCCTGTTGACGGGGCTTTCTCGTTTGATGTCATTATCGATCGTGCTACGAGTCTGCTTTGTAGAATTTATCGACCGGCCAATGGAGGGGAACCTCAGACTACTAACATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTAGTGCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCACATTCGTCTGCCAACAGTGCTATCTATGATACGCTGTGTCGTCGATTGGTTAGCCTTTGCAAGGCAGTTGTTGTCTCTGTGAACTACCGGCGTGCGCCTGAGAACCGGTATCCATGTGCTTATGACGATGGATGGGCTGCACTTAATTGGGTAAATTCAAGATCATGGCTCCAAAGTAAAGACTCGAAAACATATATTTATTTGGCTGGTGATAGTTCGGGAGGAAACATTGTACACCATGTTGCATCAAGAGCAGTAAAGTCGGGAATCGAAGTATTGGGTAATATACTTTTAAATCCAATGTTTGGCGGACAGGAAAGAACTAAATCTGAGGTTCGATTGGATGGAAAGTATTTTGTGACCATCCGGGATAGAGATTGGTATTGGAGGGCCTTCCTTCCTGAAGGAGAAGATAGAGATCATCCAGCATGTAATCCCTTCGGTCCGAGGGGCTATAGCCTGGAAGGAATCAAGTTCCCGAAAAGCCTTGTTGTCGTGGCTGGTTTAGACCTTGTCCAAGATTGGCAATTGGCTTATGCCAGAGGGCTGGAGAATGATGGCCAAGAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTGCTACCGAATACCGAGCACTTCTATACCGTCATGGATGAGATAAGTGAATTCGTGAGTTCTGACTGTTAA 1038 45.09 MAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGAFSFDVIIDRATSLLCRIYRPANGGEPQTTNIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVVSVNYRRAPENRYPCAYDDGWAALNWVNSRSWLQSKDSKTYIYLAGDSSGGNIVHHVASRAVKSGIEVLGNILLNPMFGGQERTKSEVRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGYSLEGIKFPKSLVVVAGLDLVQDWQLAYARGLENDGQEVKLLYLEQATIGFYLLPNTEHFYTVMDEISEFVSSDC* 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24812371 24815139 - CsaV3_1G039360.1 Csa01g02820 517317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02820 345 PANTHER ARYLACETAMIDE DEACETYLASE 3 341 - -
Csa01g02820 345 SUPERFAMILY alpha/beta-Hydrolases 58 341 IPR029058 -
Csa01g02820 345 Gene3D alpha/beta hydrolase 1 343 IPR029058 -
Csa01g02820 345 Pfam alpha/beta hydrolase fold 110 322 IPR013094 GO:0016787
Csa01g02820 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 185 197 IPR033140 -
Csa01g02820 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 110 126 IPR002168 GO:0016787
Csa01g02820 345 PANTHER GIBBERELLIN RECEPTOR GID1C 3 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02820 Csa-Chr1:24812371 Csa07g01753 Csa-Chr7:17905633 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02820 K14493 - csv:101213253 665.611