Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g02902 | ATGTTCTTCCACGATTGCTTTGTAAATGGTTGCGAAGCTTCTGTATTGCTTGATGATACTCCAACAATGAGGGGCGAAAAAAATGCGTTCCCAAATAGGAATTCACTTAGAGGTTTCGAAGTAATTGACGATATTAAAACTGAGGTGGAAGCTGCTTGCAAAGAAACCGTTTCATGTGCTGATATTCTTGCTCTTGCTGCTCGTGATGGCGCCGATTTGCTTGGAGGACCATTTTGGGATGTACGGCTTGGTCGAAGGGACTCGAGGACCGCGAGTGAGAGCGAAGCAAACAACAATCTTCCAGCACCAAGCTCCAACCTCTCGACACTAATCTCAATGTTCGCTGTTAAAGGCTTTAACGCCAACGAAATGACAGCTATGTCTGGTGCTCACACCATAGGCATGGGACAATGTCAATTCTTCCGAACTCGGATTTACAATGATACCAACATCAACAGTGCCTTCGCTGCTCAGCGACGAGCTAACTGCCCGCTTAACGGTGGTGACAGTAACTTGGCCCCTCTTGACTCAACCGACATAAAGTTTGACAACAAATATTTCATTGACCTAATTAATCAGTGTGGCTTGTTTCATTCGGACCAAGAACTCTCCAACGGTGGTTCACAAGATGCGTTGGTTCGAACCTATAGTATGAATTCCATTACCTTTAGAAAGGATTTTGAAAATGCAATGATCAAGATGGGGAATCTTAGTCCTGCAAGTGGAACGATTACTGAGATTAGAAAAAATTGCAGGGTCGTGAATTAA | 768 | 44.01 | MFFHDCFVNGCEASVLLDDTPTMRGEKNAFPNRNSLRGFEVIDDIKTEVEAACKETVSCADILALAARDGADLLGGPFWDVRLGRRDSRTASESEANNNLPAPSSNLSTLISMFAVKGFNANEMTAMSGAHTIGMGQCQFFRTRIYNDTNINSAFAAQRRANCPLNGGDSNLAPLDSTDIKFDNKYFIDLINQCGLFHSDQELSNGGSQDALVRTYSMNSITFRKDFENAMIKMGNLSPASGTITEIRKNCRVVN* | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 25468972 | 25470762 | - | CsaV3_1G040180.1 | Csa01g02902 | 517399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g02902 | 255 | Gene3D | - | 1 | 252 | - | - | |
Csa01g02902 | 255 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 255 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | CDD | secretory_peroxidase | 1 | 254 | IPR033905 | GO:0004601|GO:0042744 | |
Csa01g02902 | 255 | SUPERFAMILY | Heme-dependent peroxidases | 1 | 255 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PANTHER | PEROXIDASE 72-RELATED | 1 | 255 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | Gene3D | Peroxidase, domain 2 | 101 | 234 | - | - | |
Csa01g02902 | 255 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 123 | 133 | IPR019793 | - | |
Csa01g02902 | 255 | PRINTS | Plant peroxidase signature | 122 | 134 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Plant peroxidase signature | 37 | 50 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Plant peroxidase signature | 229 | 242 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Plant peroxidase signature | 173 | 188 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Plant peroxidase signature | 56 | 66 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Plant peroxidase signature | 75 | 90 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Plant peroxidase signature | 189 | 206 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Haem peroxidase superfamily signature | 175 | 190 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Haem peroxidase superfamily signature | 57 | 74 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Haem peroxidase superfamily signature | 123 | 138 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PRINTS | Haem peroxidase superfamily signature | 75 | 87 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g02902 | 255 | PANTHER | PEROXIDASE | 1 | 255 | - | - | |
Csa01g02902 | 255 | Pfam | Peroxidase | 1 | 217 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g02902 | Csa-Chr1:25468972 | Csa07g00473 | Csa-Chr7:3441475 | 3.77E-151 | dispersed | |
Csa01g02902 | Csa-Chr1:25468972 | Csa06g03285 | Csa-Chr6:27565675 | 1.35E-88 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g02902 | K00430 | - | csv:101206193 | 479.174 |