Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02902 ATGTTCTTCCACGATTGCTTTGTAAATGGTTGCGAAGCTTCTGTATTGCTTGATGATACTCCAACAATGAGGGGCGAAAAAAATGCGTTCCCAAATAGGAATTCACTTAGAGGTTTCGAAGTAATTGACGATATTAAAACTGAGGTGGAAGCTGCTTGCAAAGAAACCGTTTCATGTGCTGATATTCTTGCTCTTGCTGCTCGTGATGGCGCCGATTTGCTTGGAGGACCATTTTGGGATGTACGGCTTGGTCGAAGGGACTCGAGGACCGCGAGTGAGAGCGAAGCAAACAACAATCTTCCAGCACCAAGCTCCAACCTCTCGACACTAATCTCAATGTTCGCTGTTAAAGGCTTTAACGCCAACGAAATGACAGCTATGTCTGGTGCTCACACCATAGGCATGGGACAATGTCAATTCTTCCGAACTCGGATTTACAATGATACCAACATCAACAGTGCCTTCGCTGCTCAGCGACGAGCTAACTGCCCGCTTAACGGTGGTGACAGTAACTTGGCCCCTCTTGACTCAACCGACATAAAGTTTGACAACAAATATTTCATTGACCTAATTAATCAGTGTGGCTTGTTTCATTCGGACCAAGAACTCTCCAACGGTGGTTCACAAGATGCGTTGGTTCGAACCTATAGTATGAATTCCATTACCTTTAGAAAGGATTTTGAAAATGCAATGATCAAGATGGGGAATCTTAGTCCTGCAAGTGGAACGATTACTGAGATTAGAAAAAATTGCAGGGTCGTGAATTAA 768 44.01 MFFHDCFVNGCEASVLLDDTPTMRGEKNAFPNRNSLRGFEVIDDIKTEVEAACKETVSCADILALAARDGADLLGGPFWDVRLGRRDSRTASESEANNNLPAPSSNLSTLISMFAVKGFNANEMTAMSGAHTIGMGQCQFFRTRIYNDTNINSAFAAQRRANCPLNGGDSNLAPLDSTDIKFDNKYFIDLINQCGLFHSDQELSNGGSQDALVRTYSMNSITFRKDFENAMIKMGNLSPASGTITEIRKNCRVVN* 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25468972 25470762 - CsaV3_1G040180.1 Csa01g02902 517399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02902 255 Gene3D - 1 252 - -
Csa01g02902 255 ProSiteProfiles Plant heme peroxidase family profile. 1 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 CDD secretory_peroxidase 1 254 IPR033905 GO:0004601|GO:0042744
Csa01g02902 255 SUPERFAMILY Heme-dependent peroxidases 1 255 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PANTHER PEROXIDASE 72-RELATED 1 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 Gene3D Peroxidase, domain 2 101 234 - -
Csa01g02902 255 ProSitePatterns Peroxidases proximal heme-ligand signature. 123 133 IPR019793 -
Csa01g02902 255 PRINTS Plant peroxidase signature 122 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Plant peroxidase signature 37 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Plant peroxidase signature 229 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Plant peroxidase signature 173 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Plant peroxidase signature 56 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Plant peroxidase signature 75 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Plant peroxidase signature 189 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Haem peroxidase superfamily signature 57 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Haem peroxidase superfamily signature 123 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PRINTS Haem peroxidase superfamily signature 75 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa01g02902 255 PANTHER PEROXIDASE 1 255 - -
Csa01g02902 255 Pfam Peroxidase 1 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02902 Csa-Chr1:25468972 Csa07g00473 Csa-Chr7:3441475 3.77E-151 dispersed
Csa01g02902 Csa-Chr1:25468972 Csa06g03285 Csa-Chr6:27565675 1.35E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02902 K00430 - csv:101206193 479.174