Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02914 ATGAGGTTATCGTTATCCAGAATTCTTGTCCTCTTTCTCTTTTTTCATCTTCTTCTCTGCTTTGCTACTTTCCCTACCCTTTCCATTTCTCTCATAACCGTCACTAAATCCGAGTTGGTGCCCGGCGAGATCAATGCTACTGCCGACTCTAACTCCTCGAGATCCGACAATGATGACCATAGTTTTGCTAACATAATCGATCGGGCTCTCGAGAGGGAATTTACTGAGAATGAGCAGACTGATGAAGTCGCGGATCCTGGCAGCTTCAACAACAGCGTTGCTGAGAAGCAGGCAGTTTTGGAAACTGTTGCTCGAGTTAAGTCAAAGAAGAATGAAACGAAAGAGGAGAAATCATTTCAGTTCCATGATGTCTTCCATTTAGATAATGAGAATCGAGCAGAAGACATGCCAACATTAATTGATCGAAAGGACAATGTCTTTATTATTTCAAATCCCAAGTCAAAGTATCCTGTGCTCCAATTGGATTTAAGATTGATTTCAGATCTGGTTGTTGTTATTGTTTCTGCAACTTGTGGTGGCATTGCTTTCGCTTGTGCAGGACAACCGGTCTTTACTGGATACCTGTTAGCTGGATCTCTCATTGGACCTGGAGGTTTAAGCTTTGTCAGTGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTGATTTTCCTTCTTTTTGCATTGGGCCTGGAGTTCTCCACTACAAAACTTCGTGTAGTTCGAGCAGTGGCTGTTCTTGGAGGACTGCTTCAGATTTTCCTTTTTATGTGCTTGTGTGGAATTACAGCTTCGCTATGTGGCGGTAAATCTTCAGAGGGGGTATTTGTTGGTGCATTCTTGTCTATGTCTTCGACTGCAGTGGTCTTGAAATTTTTAATGGAGCGAAATAGCGTCAATGCCATTCATGGTCAGGTGACCATTGGTACTCTTATTCTTCAGGATTGTGCCGTAGGCTTGCTGTTTGCTTTGCTTCCGATTCTTGGTGGTACTTCTGGTGTTCTTCAAGGAGTTCTGTCTATGACTAAGTCGTTGGTGGTCTTGATTGCGTTTTTGATTATTTTGACAATATTTTCTCGTACATGTGTTCCGAGGTTCCTTAAGCTTATGGTTAGCCTGTCATCTCAGACTAATGAACTCTATCAATTGGCAGCTGTTGCATTCTGCTTGCTTGTTGCTTGGTGCAGTGATAAACTTGGCTTAAGCCTTGAATTGGGTTCCTTTGCGGCCGGTGTGATGATTTCAACTACTGATCTTGCTCAGCATACCCTTGAACAGGTTGAGCCCATTCGCAACTTCTTTGCTGCTCTTTTTCTTGCCAGCATTGGGATGCTAATTCATGTTCATTTCCTATGGAACCACATTGATATTTTACTTGCGGCTGTAATATTGGTAATCGTTATAAAGACTGTAGTGGTTACTACTGTTGTCAAGGGATTTGGATACAACAACAAGACTTCACTTCTGGTTGGGATGTCACTCGCACAAATTGGAGAATTTGCCTTTGTCCTTCTAAGCCGTGCCTCTAATCTTCATCTTGTCGAGGGAAAATTGTATATACTGCTGCTTGGGACAACCGCACTTAGCCTGGTGACTACACCATTGCTTTTCAAGCTTATTCCTGCTGTGGTGCGTATTGGAGTATTGTTGCGGTGGTTTTCACCTGATGGTTTTAGTGAGATTGGATTCAAAGGAGATGCCTTTCGAACAGATGGTGCCAAGCGCATTACTTTGGTGATTCAGGATGCTCACGTTTCGTGA 1764 42.97 MRLSLSRILVLFLFFHLLLCFATFPTLSISLITVTKSELVPGEINATADSNSSRSDNDDHSFANIIDRALEREFTENEQTDEVADPGSFNNSVAEKQAVLETVARVKSKKNETKEEKSFQFHDVFHLDNENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVFTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLCGITASLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSVNAIHGQVTIGTLILQDCAVGLLFALLPILGGTSGVLQGVLSMTKSLVVLIAFLIILTIFSRTCVPRFLKLMVSLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHIDILLAAVILVIVIKTVVVTTVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYILLLGTTALSLVTTPLLFKLIPAVVRIGVLLRWFSPDGFSEIGFKGDAFRTDGAKRITLVIQDAHVS* 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25556439 25566553 - CsaV3_1G040300.1 Csa01g02914 517411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02914 587 Coils Coil 96 116 - -
Csa01g02914 587 Gene3D - 163 546 IPR038770 -
Csa01g02914 587 Pfam Sodium/hydrogen exchanger family 170 539 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Csa01g02914 587 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 10 585 IPR045158 GO:0015386|GO:0071805|GO:1902600
Csa01g02914 587 PANTHER K(+) EFFLUX ANTIPORTER 6 10 585 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02914 Csa-Chr1:25556439 Csa02g01840 Csa-Chr2:17589047 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02914 - - csv:101208614 1058.9