Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g02995 ATGGACTCCATGCCTAGACTACTCATTCCTTTTCTTCTTCTTCTTCTTTCTTGTGTTTTCATCAATGCCAAGAAAACCTACATTGTTCATATGAAACATCATGCTCTCCCATCACAATATCTCACTCACCATGATTGGTACTCTGCTAATCTTCAATCTCTTTCTTCATCTTCTTCCTCTGACTCTCTTCTTTACACCTACACTTCCTCCTTCCATGGCTTTGCTGCTTTTTTAGATTCTCAGGAAGTGGAATTGCTCCGGCAATCCGATTCGGTTCTGGGTGTTTATGAAGATACTGTTTACAATCTTCATACGACTCGTACTCCCGGATTCCTCGGTCTCGACTCTGATTTCGGGTTATGGGAAGGTCACACCACTCAGGATCTTAACCAAGCTTCTCACGATGTCATCATTGGTGTTCTCGATACTGGGATTTGGCCGGAATCGAAGAGCTTTGATGACACTGGAATGCCGGAGATCCCATCACGGTGGCGTGGAGAATGTGAAGCAGGACCTGATTTTAGTCCTTCCCTTTGTAACAAGAAACTAATTGGAGCTCGTAGCTTCTCTAAAGGTTATCAAATGGCTTCCGGCGGTGGGTATTTCAGAAAACCGAGAGAGAATGAGTCAGCTAGAGATCAGGATGGGCACGGAACGCACACCGCCAGTACGGCTGCTGGTTCACATGTGGCTAATGCGAGTTTACTTGGTTATGCTAGAGGCATTGCTAGAGGGATGGCTCCACAAGCGAGAGTTGCTGCTTACAAGACTTGTTGGCCAACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCGATAATGGACGGTGTCGATGTACTTTCACTCTCTTTAGGTGGTGGCTCTGCTCCGTATTACAGGGATACCATAGCAATTGGAGCATTTGCAGCTATGGAGAAGGGGGTTTTTGTTTCTTGCTCAGCTGGGAATAGTGGTCCAAACAAGGCTTCCCTGGCCAATGTAGCACCATGGATCATGACGGTTGGAGCCGGAACGCTCGATCGAGACTTCCCAGCTTATGTCCAGCTTGGAAATGGGAAACGATTCACTGGAGTGTCGCTATACAGTGGGCAAGGAATGGGGAATAAGGCAGTGGCATTGGTGTATAACAAAGGAAGTAACACCTCCAGTAATATGTGCTTGCCGGGTTCTCTTGAGCCGGCGGTGGTTCGAGGGAAAGTGGTGGTTTGCGACAGAGGAATCAATGCCAGAGTAGAAAAAGGAGGGGTGGTGAGAGATGCTGGTGGGATTGGGATGATTCTGGCAAACACAGCAGCTAGTGGGGAGGAATTGGTGGCTGACAGTCACTTGCTGCCAGCCGTGGCGGTGGGAAGGAAAACTGGCGACTTGATCCGGCAGTATGTTCGATCAGATTCAAATCCAACCGCAGTGTTGAGCTTTGGTGGGACAATTCTGAACGTCCGCCCATCTCCGGTGGTGGCGGCCTTCAGTTCTAGAGGACCAAATTTGGTAACCCCCCAAATCCTCAAGCCGGACGTTATTGGTCCTGGCGTTAACATCTTGGCTGCCTGGTCTGAGTCCATTGGACCTACTGGATTGGAGAATGACAAGAGGAAAACTCAGTTCAATATCATGTCTGGAACTTCCATGTCGTGCCCACATATCAGTGGACTGGCTGCATTGCTGAAGGCAGCTCATCCACAATGGAGTCCAAGTGCAATCAAATCTGCTTTAATGACCACTGCATACACTCAGGACAACACCAACTCGTCTCTCCGGGATGCTGCTGGAGGGGGGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCATAAAGCTCTCTCCCCTGGACTTTTATATGATATCTCAACTAATGACTACGTTGCCTTCTTGTGCTCCTTGGACTATGGGATTGATCATGTTCAAGCGATTGTGAAACGTTCGAACATAACCTGCTCTAGAAAGTTTGCTGATCCGGGACAACTTAACTATCCTTCATTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGGTACACTCGTATAGTCACCAATGTTGGGGCTGCAGGGTCAGTTTATGATGTGGCTACTACTGCACCACCGGTTGTGAAGGTGACCGTGAAACCTTCAAAGCTTGTGTTCACTAAAGTTGGGGAGAGGAAGAGGTACACTGTTACATTTGTTGCGAGCAGGGATGCTGCTCAAACCACAAGATTTGGGTTTGGGTCGATTGTGTGGAGCAATGACCAACACCAAGTTAGAAGCCCCGTGTCATTCGCCTGGACTAGGTTGTGA 2292 48.43 MDSMPRLLIPFLLLLLSCVFINAKKTYIVHMKHHALPSQYLTHHDWYSANLQSLSSSSSSDSLLYTYTSSFHGFAAFLDSQEVELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHTTQDLNQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGECEAGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENESARDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAIMDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKAVALVYNKGSNTSSNMCLPGSLEPAVVRGKVVVCDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVRSDSNPTAVLSFGGTILNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLENDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGGFSNPWAHGAGHVDPHKALSPGLLYDISTNDYVAFLCSLDYGIDHVQAIVKRSNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYDVATTAPPVVKVTVKPSKLVFTKVGERKRYTVTFVASRDAAQTTRFGFGSIVWSNDQHQVRSPVSFAWTRL* 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26176493 26179728 + CsaV3_1G041110.1 Csa01g02995 517492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g02995 763 Pfam PA domain 376 459 IPR003137 -
Csa01g02995 763 Pfam Peptidase inhibitor I9 26 104 IPR010259 -
Csa01g02995 763 CDD PA_subtilisin_like 349 472 - -
Csa01g02995 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 104 IPR037045 -
Csa01g02995 763 PANTHER CUCUMISIN-RELATED 16 760 - -
Csa01g02995 763 MobiDBLite consensus disorder prediction 198 224 - -
Csa01g02995 763 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Csa01g02995 763 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Csa01g02995 763 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Csa01g02995 763 SUPERFAMILY Protease propeptides/inhibitors 24 103 - -
Csa01g02995 763 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Csa01g02995 763 Gene3D Peptidase S8/S53 domain 135 626 IPR036852 GO:0004252|GO:0006508
Csa01g02995 763 Pfam Fibronectin type-III domain 660 756 IPR041469 -
Csa01g02995 763 Gene3D - 630 760 - -
Csa01g02995 763 ProSiteProfiles Serine proteases, subtilase domain profile. 117 613 - -
Csa01g02995 763 Gene3D - 343 481 - -
Csa01g02995 763 Pfam Subtilase family 134 584 IPR000209 GO:0006508|GO:0008236
Csa01g02995 763 CDD Peptidases_S8_3 101 579 IPR034197 -
Csa01g02995 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Csa01g02995 763 SUPERFAMILY Subtilisin-like 103 617 IPR036852 GO:0004252|GO:0006508
Csa01g02995 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 760 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02995 Csa-Chr1:26176493 Csa06g02998 Csa-Chr6:25857587 0 dispersed
Csa03g02634 Csa-Chr3:24842049 Csa01g02995 Csa-Chr1:26176493 0 transposed
Csa01g02995 Csa-Chr1:26176493 Csa07g02348 Csa-Chr7:21727193 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g02995 - - csv:101209781 1491.86