Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g03093 ATGGCCGAGGTTATGAACATGGCCGCCGCCGACGAGTCCTTGGACCGCCGTCGTGATCGCCAAGAGAAATCTTCTGACGAGCAACCTCATTCCTCGCCCCAGTCACACCCTCCTGCTGCTCCGCCTCCTCCCTCCAGAAGAAGGGATAGAGATGAGAGAGATAGGAGAGACGACCGGGATTTTGATCGTCCTCCCAATCGACGTGGTGATAATTACGATCGTAATCGTTCTCCGCCTTCGCTGCCTCCGAGGGACAGGGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACACTCGCCTCCTAGACGGTCTCCTCCTCCACCCTACAAGCGTTCAAGAAGAGATGATGGTGGGTATGATGGAAGAAAGGGAAGCCCTAGAGGTGGTTTTGGGCCAGGTGATAGGAGGTTTGGTTATGATTATGGTGGGGGATATGAGCGGGAAATGCGAGGCCGGCCTGGGTATGTTGATGAAAGACCTATGGGTCGGTTCATGGGTCGTTCATCCGGTGGCTATCAAGATTGGGATTCGAATCGTGGTGGGCATGGTGACGCACTCAATCCAGGAGGTGGCCAAAGAGAAGGCTTGATGACATACAAGCAATTTATGCAAGAACTTGAAGATGATATACTGCCTGCTGAAGCTGAGCGCAGATATCAAGAATACAAGTCAGAGTATATTACAACACAGAAACAAGCCTTTTTTGATTCTCACAAGGATGAAGAATGGTTGAGAGACAAATATCATCCAACCAACCTAGTTACTGTCATTGAAAGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGACTTAGGTCCAGGGATCAGTGCAGCAGCTACAAATAAATCTGGGCAGGCTAGTGAACCAAATTCAGATGATGAAGCAGACAACGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATCTTCTTTCTGCTGCTCCTAAGGCCCATCCTGTTAGTTCTGAACCAAGACGAATCCAGATTGACATTGGACAAGCTCAAGCTCTTGTCCGTAAACTTGATTCTGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGATAATGACAAATTAGGTCGGGATAAAGCACATGGTGGCTCTTCTGGCCCAGTCATAATCATACGGGGGCTGACAACTGTTAAAGGCTTGGAGGGCGTTGAGCTATTGGACACACTTCTTACGTATCTGTGGCGCATCCATGGTATAGATTACTATGGAATGGTCGAGACAAGGGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAGCTCTAACATGGCTGGTGGTGCAGACGAGTGGGAGAAAAAGCTTGACTTACGTTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAAGCTTTTGATCCATATGTTCGCAAGATCAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCACGCCCCTGAGTTTGTTCATAAGCATCTTAACTTGAAACATCCAGAGCTTGTGATGGAACTGACTTCAAAAGTTCGTGAAGAGTTGTATTTCCAAAATTACATGAATGACACAGATGCTCCTGGAGGGACTCCTGTTATGCAACAATCACTCCCGAAGGATAAGCCACAGAGACGTAGGATGAACTTAGATGGTCGGTTGAAGGATGACAGAGGCAATCGCAGGGACCGGGATAATTGGGCTAATGGGGGTGACAGATTTGATAGATCTGAGAACCCACAATCAAGTGATTTCCCATCAGCAAATGATGGTACAGATGGTGGAAACATTGATGATCCTATGTTTGATTCTTTTGGCGGACAAGGAAGACACGTTGCTCCTTTTGCCTCTGAAATACCGCCGCCAGTGCTTATGCCTGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTTCCTGCTCCGCCTGAAGTGGCGATGAGAATGCTGCGGGAACAAGGTGGTCCACCTCCTTTTGAGGGCGGTGGTAGAAATGGAAGGCCAGGACCTCAATTAGGTGGATCTGCTCCAATCCTTGCCCTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGACGCACCGGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAG 2256 47.74 MAEVMNMAAADESLDRRRDRQEKSSDEQPHSSPQSHPPAAPPPPSRRRDRDERDRRDDRDFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPMGRFMGRSSGGYQDWDSNRGGHGDALNPGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEYITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGISAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDIGQAQALVRKLDSEKGIEENILSGSDNDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGIDYYGMVETREAKGLRHVREEGKSSNMAGGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDTDAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDGGNIDDPMFDSFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILALSSGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL* 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26885387 26894136 - CsaV3_1G042090.1 Csa01g03093 517590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g03093 751 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 751 - -
Csa01g03093 751 MobiDBLite consensus disorder prediction 1 202 - -
Csa01g03093 751 MobiDBLite consensus disorder prediction 153 170 - -
Csa01g03093 751 Pfam Arsenite-resistance protein 2 451 654 IPR007042 -
Csa01g03093 751 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 751 IPR039727 GO:0006397
Csa01g03093 751 MobiDBLite consensus disorder prediction 43 135 - -
Csa01g03093 751 MobiDBLite consensus disorder prediction 317 334 - -
Csa01g03093 751 MobiDBLite consensus disorder prediction 563 654 - -
Csa01g03093 751 MobiDBLite consensus disorder prediction 580 612 - -
Csa01g03093 751 Pfam SERRATE/Ars2, N-terminal domain 213 294 IPR021933 -
Csa01g03093 751 MobiDBLite consensus disorder prediction 10 29 - -
Csa01g03093 751 MobiDBLite consensus disorder prediction 299 354 - -
Csa01g03093 751 MobiDBLite consensus disorder prediction 693 716 - -
Csa01g03093 751 ProSitePatterns Zinc finger C2H2 type domain signature. 518 541 IPR013087 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g03093 - - csv:101219335 1235.32