Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g03120 ATGAGGCCTGTCAAACGCGAACCCACCGTTAGCACCCGCAGTAATCGAAATAGAGGCGGCGACGGCGGTGGCGGTGGCGGTGGCGGCGCTGTTGACGGTGCGAGTTTAAGGGATAGTAAGCGGGAGAGGGTTGCCCGGGAGAGAGAGAACTCCGGAGAGGAGAATATGAATGAAGAAGTGGGTCAGCAGGATTTGACGAAGAGGCGGGTCCTTCGCTCTCGGTACCTCGCGGTTATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATTTGGATAAGTTTAATGTTATCATCAATGAAGTGGAAAAGTTGCACGAGCAAGTTCAGAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCTTTGCAAGATATTGCCAACTCCCTTGTGACCTCTATTAGGTCCCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTTAGTTGTCTACTCAGAGAGTTTGCTGACATTAACGGTAGTATAAACTCTGAAGAACAAGACCTGGTTTCTGTCAATTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGTTATGGATGCCGCACCATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATGTTCCCAGGAAACGTGTCAGGCCTACTGAAAGTTCCAGACCTGCAGAGGTTGAAGATAATGGATCCGAACCAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTAGAACATTTGATATTGAATAGAAAGTCTTTCGGACAGACAGTGGAGAATTTATTTGCTCTATCCTTTCTGGTTAAGGATGGTCGAGCTGAGATAACTATTGATAAAAATGGTTCTCATTTTGTGTCACCGAAGAATGCCCCTGCTCATAGTGCCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGGTACGAACTTAG 996 43.98 MRPVKREPTVSTRSNRNRGGDGGGGGGGGAVDGASLRDSKRERVARERENSGEENMNEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQDLVSVNWKDIGLSVSSIFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRVRPTESSRPAEVEDNGSEPKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFGQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSAIMSHEVNYSHFVFRFDYKDWKVRT* 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27291132 27294459 - CsaV3_1G042360.1 Csa01g03120 517617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g03120 331 MobiDBLite consensus disorder prediction 198 237 - -
Csa01g03120 331 MobiDBLite consensus disorder prediction 212 235 - -
Csa01g03120 331 PANTHER UNCHARACTERIZED 38 329 IPR027786 GO:0005634|GO:0006281|GO:0030915
Csa01g03120 331 MobiDBLite consensus disorder prediction 1 63 - -
Csa01g03120 331 Pfam Nse4 C-terminal 254 328 IPR014854 -
Csa01g03120 331 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 38 329 - -
Csa01g03120 331 MobiDBLite consensus disorder prediction 35 63 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g03120 K22825 - csv:101220149 630.943