Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g03203 ATGGAACCGAATGGCGACCTACCTTTGTCTTCTTCAACCTTCATGATCATCTTGTTTTATGGCTCAATCCTGGTGGTTGCCTTCATTTTGTTTTATGCTAAGAGACGAAACAAATATTGTGTTGGTAGTACAGCAGCAGCATTACCACCTGGCCCAACTCCATGGCCTATCGTCGGCTGCCTCCCAACGATATGGCGGAAGAAGCCGAGATACCGATGGGTACATAAGATAATGGAAGAGCTCAACACCGAAATTGCATGCATCCGTCTCGGGAAAATCCACGTGATTCCCGTGACATCTCCAGAACTCGCTATCGAGTTTCTAAAGACACACGACTCCGTATTCGCGTCGCGGCCCATCACCGTCACCACGGACATCTTCAGCGACGGTTTCCTCACAGCAGGTGTAGCGCCGTGGGGAAACCAATGGAAGAAGATGAGAAGAATACTCACGTCGGAAATACTGAGTCCAGCGCGACACCGTTCGATGTTGTCGAAAAGAACGGAAGAAGCCGACAATCTCCTTCGTTATGTATTTAGTCTAACGAAAACAACACCGACGTCGGTGAATGTGAGAAGCATAACGCAACATTATTCGGGGAACGTGATGAGGAGAATGATGTTCAATAGAAGATACTACGGGAAAGGGAGGCCAGACGGGGGGCCCGCGACGGAGGAAGAAGAACACATTGGAGCATTGTTTACAATGCTTCAACATGTTTATGCATTTTGTGTTTCAGATTACATGAGTTGTTTGAAGGCATTTGATTTGGATGGGCACGAGAGGATTGTGAAGAAGGCTTTGAATGTAATTAGAAAATATGAAGAGCCAATTATTGATGAGAGAGTTCAACAATGGAGAGATGGGAAGAGGAAGGAAACTGAGGATATGTTGGATATTTTCATTTCACTCAAAGATGGAAACGGGGAGCCATTGTTGTCTGTTAAAGAGATTAAAGCACAAATTACTGAACTACTTCTTGCAACAGTAGACAATCCATCAAACGCCGTGGAATGGGCCATGGCGGAGATGCTAAACCAACCCCAACTCCTCCAACAAGCCACCGAAGAGCTCGATAGAGTCGTAGGAAAGCAGAGACTTGTTCAAGAATCCGATATCCCAAACCTCAAATTCCTCACTGCCTGCGCTAGAGAAGCTCTTCGCCTCCACCCAATTGCTCCTTTCAACCTCCCTCACATCGCCACCACTGACGTGGTCGTCGCCGGCTACCTCATCCCCGCCGGCAGCCACGTTCTCCTAAGCCGCCTCGGCCTCGGAAGGAACCATAGAATTTGGCCTGACCCTATGAGATTTGACCCGAACCGCCATCTTCAAGATCCAGGCGCTGATTTGGGGCTGGGTGAGCCCGATTTGAGGTTTATTACGTTTACTAGAGGACGAAGAGGGTGCATGGGAGGCACTCTTGGGACGGCCATTACTATGATGCTTTTGGCTCGCCTTGTGCAGGGATTTACTTGGCAGTTGCCGCCTGGAGTGGCAGCGATTGAGTTGTCGGAGTCCCATCAGCTGTTTCTGAAGGATCCTATGTTTGCATTAGCTCAGCCGAGGCTGCCGGAGTCTCTCTACCCTAATTTTGAAATAGAGAAAAAGGAGTTTTGA 1620 48.46 MEPNGDLPLSSSTFMIILFYGSILVVAFILFYAKRRNKYCVGSTAAALPPGPTPWPIVGCLPTIWRKKPRYRWVHKIMEELNTEIACIRLGKIHVIPVTSPELAIEFLKTHDSVFASRPITVTTDIFSDGFLTAGVAPWGNQWKKMRRILTSEILSPARHRSMLSKRTEEADNLLRYVFSLTKTTPTSVNVRSITQHYSGNVMRRMMFNRRYYGKGRPDGGPATEEEEHIGALFTMLQHVYAFCVSDYMSCLKAFDLDGHERIVKKALNVIRKYEEPIIDERVQQWRDGKRKETEDMLDIFISLKDGNGEPLLSVKEIKAQITELLLATVDNPSNAVEWAMAEMLNQPQLLQQATEELDRVVGKQRLVQESDIPNLKFLTACAREALRLHPIAPFNLPHIATTDVVVAGYLIPAGSHVLLSRLGLGRNHRIWPDPMRFDPNRHLQDPGADLGLGEPDLRFITFTRGRRGCMGGTLGTAITMMLLARLVQGFTWQLPPGVAAIELSESHQLFLKDPMFALAQPRLPESLYPNFEIEKKEF* 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28089423 28091229 - CsaV3_1G043190.1 Csa01g03203 517700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g03203 539 PANTHER PHENYLALANINE N-MONOOXYGENASE 24 528 - -
Csa01g03203 539 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 24 528 - -
Csa01g03203 539 Pfam Cytochrome P450 49 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 SUPERFAMILY Cytochrome P450 47 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 Gene3D Cytochrome P450 43 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03203 539 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g03203 Csa-Chr1:28089423 Csa05g00917 Csa-Chr5:7160760 0 dispersed
Csa01g03203 Csa-Chr1:28089423 Csa01g03204 Csa-Chr1:28120927 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g03203 K12153 - csv:101215668 1093.95