Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g03205 ATGGAAGCTGGTTTTTTAATATTCCTTACTCAATTGACTCACCAACATTCCCCAATAGCCATATCCAAAACTTTTATTATATTTCTGTTTATGGCTTTTGCTTCTGTCATGTTTTCACATTATTATAATCGTAGAAAAAAATACTCAGTAGTTCGAAAACCACGTCTCCCACCAGGTCCAAAGCCATGGCCAATCGTGGGTTGCCTCCCAACAATGTTAACCAACAAATCCCCAACATCCCATTGGATTCATTCGGTAATGAAGCAATTCAACACCGAGATTGCTTGCATACGCCTTGGAAGTACTTACATTATCCCAGTCACTTCTCCAGAACTCGCTATTGAATTTCTTAAGACACATGATTCTGTCTTTTCATCACGTTCTTCAATTTCCAACACTGTTCATATCTTAAGCCGTGGATATCTCACCACTGCATTTTCATCCATGGGTGATCAATGGAAGAAGATGAGAAGAATTCTCGCATCCGAAATTCTCAATCCGACAATGCTTCATCAAATGCTTGGCCAAAGAACCGCAGAAGCTGATACACTTTTACGCTATATTTTCTCCATTACAAGTGGAAATGGAGGTTCTGCAGTGATTAATGTTAGAAGCATTACACAGCATTATTGTGGTAACATTATTAGAACAATGCTATTCAATAGAAGATACTATGGCAAAGGGAGGGAAGATGGAGGGCCAACTTTGGAAGAAGAAGAACATAATCAAGCACTGTTGACGATTCTTAGGCATGTTAATGCATTTTCTATATCAGATTTTATGCCTTGTTTGAAGCCATTTGATCTAGATGGACATGAGAAAATTATGAAGAATGCTTTGAATGTTGTTCGAAAGCATGACGAACCCATAATAGATGAGAGAGTGAAACAATGGAAGAAGGATAAGAAACTAGAAGGCAAAGACATTCTTGATATCCTTATTTCACTTAAAGATGATAATGGAAATTCATTGTTGTCAATTGAAGAGATTAAGGCCCAAATCACTGAGTTACAAATTGCGACAATAGATAATCCATCGAATGCAGTGGAATGGGCAATGGCGGAAATAATCAATCAACCAGAAGTTCTCAAGAAAGTCGTCAAAGAGTTGGACGACGTAGTGGGAAAAGAAAGGCTAGTTCAAGAATCCGATATCCCAAAACTCAAGTATCTCACTGCTTGTCTTAGAGAATCTTTTCGACTTCATCCATTTTCACCTTTCAATATTCCACATGTATCAAAATTTGATATCGTTGTGAATGGCTACTTAATTCCCAAAGGTAGTGAAGTCTTGCTTAGTCGTTTTGGTCTGGGTCGAAACCCAAGAATTTGGGAGGATCCGATCAAATTTAATCCAGAACGTCACTTAAAAGATGCCTCAGAAGAATTGGGATTATCAGAACCCAGCTTGCGATTCATCACCTTTAGTAGAGGGAGGAGAGGATGTGTTGGGAGCTCACTTGGAACTAATATTACCATGATGCTATTTGCTAGACTTCTACAAGGATTTTCATGGAGCTTACTACCAGGAATCAAAGAAATTGACTTCTCTAAAATGGATCACGAACACTTGCTCTTAAATCCATTAAAATTGCATGCAGAACCACGTTTGTCTCATGGTATGTACCCTAGCTAG 1635 38.41 MEAGFLIFLTQLTHQHSPIAISKTFIIFLFMAFASVMFSHYYNRRKKYSVVRKPRLPPGPKPWPIVGCLPTMLTNKSPTSHWIHSVMKQFNTEIACIRLGSTYIIPVTSPELAIEFLKTHDSVFSSRSSISNTVHILSRGYLTTAFSSMGDQWKKMRRILASEILNPTMLHQMLGQRTAEADTLLRYIFSITSGNGGSAVINVRSITQHYCGNIIRTMLFNRRYYGKGREDGGPTLEEEEHNQALLTILRHVNAFSISDFMPCLKPFDLDGHEKIMKNALNVVRKHDEPIIDERVKQWKKDKKLEGKDILDILISLKDDNGNSLLSIEEIKAQITELQIATIDNPSNAVEWAMAEIINQPEVLKKVVKELDDVVGKERLVQESDIPKLKYLTACLRESFRLHPFSPFNIPHVSKFDIVVNGYLIPKGSEVLLSRFGLGRNPRIWEDPIKFNPERHLKDASEELGLSEPSLRFITFSRGRRGCVGSSLGTNITMMLFARLLQGFSWSLLPGIKEIDFSKMDHEHLLLNPLKLHAEPRLSHGMYPS* 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28145052 28147440 - CsaV3_1G043210.1 Csa01g03205 517702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g03205 544 Pfam Cytochrome P450 57 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 Gene3D Cytochrome P450 50 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 SUPERFAMILY Cytochrome P450 57 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03205 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Csa01g03205 544 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 31 541 - -
Csa01g03205 544 PANTHER PHENYLALANINE N-MONOOXYGENASE 31 541 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g03205 Csa-Chr1:28145052 Csa05g00917 Csa-Chr5:7160760 0 dispersed
Csa01g03204 Csa-Chr1:28120927 Csa01g03205 Csa-Chr1:28145052 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g03205 - K12153 csv:101217397 1064.29