Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g03255 | ATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACCTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAGGCCTTCTTTTGGATCTTCCAGGAAATCAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGGCAACTCTGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTGCCAGGCGATTTCGGGTTTGACCCACTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTGGCATACGGCGAAGTGATCAACGGAAGGTTTGCAATGTTGGGAGCAGCAGGAGCCATAGCCCCAGAAATCTTTGGATCACTGGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCTTACACACTCTTTGTATTTGAAATGGCTCTGATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGATCCATGGGAAAACAATACTTTTTGGGCCTGGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGCGGGCCATTGTTCAACCCACTAGGGTTTGGGAAAGATGAGAAGTCAATGAAGGAATTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAACCTTTTGGATCATTTGTCTGACCCTGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAG | 822 | 47.69 | MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH* | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 28713310 | 28714856 | - | CsaV3_1G043710.1 | Csa01g03255 | 517752 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g03255 | 273 | Pfam | Chlorophyll A-B binding protein | 64 | 242 | IPR022796 | - | |
Csa01g03255 | 273 | Gene3D | Chlorophyll a/b binding protein domain | 54 | 272 | - | - | |
Csa01g03255 | 273 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 1 | 272 | - | - | |
Csa01g03255 | 273 | SUPERFAMILY | Chlorophyll a-b binding protein | 52 | 269 | - | - | |
Csa01g03255 | 273 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 272 | IPR001344 | GO:0009765|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g03255 | Csa-Chr1:28713310 | Csa02g01960 | Csa-Chr2:18395695 | 3.08E-53 | dispersed | |
Csa01g03255 | Csa-Chr1:28713310 | Csa01g00560 | Csa-Chr1:3626647 | 3.79E-48 | transposed | |
Csa01g03255 | Csa-Chr1:28713310 | Csa01g00241 | Csa-Chr1:1525225 | 4.36E-48 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g03255 | K08909 | - | csv:101202993 | 549.28 |