Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g03290 ATGGAGCTTTTCCTCATCTCTCTCTTAATCCTTTTGTTCTTCTTTCTTTCTCTTACTCTTTTCATCCTCTTCCACAATCACAAATCCTTATTCTCTTATCCCAACACTCCTCCTGGCGCCATCGGCCTTCCCATACTCGGCGAGAGCGTCGAGTTCTTATCATCTGGTTGGAAAGGCCATCCTGAGAAGTTCATCTTCGATCGTTTGAATAAGTACAAGTCAGATGTGTTCAAAACCTCGATCGTGGGAGTTCCAGCCGCCATTTTCTGCGGCCCTATTTGTAACAAGTTCCTCTTCTCTAACGAGAATAAACTGGTTACTCCTTGGTGGCCAGATTCCGTGAACAAGATCTTCCCCTCTACAACTCAGACTAGCACCAAAGAAGAAGCTAAGAAACTCAAGAAACTCCTTCCGCAATTCCTTAAACCCGAAGCGCTTCAGCGTTATATTGGAATTATGGACGAACTTGCTGAACGCCATTTCAATTCCTTTTGGAAGAACAGAGAAGAGGTCCTCGTGTTTCCTCTTGCTAAAAGCTTCACATTCTCAATAGCGTGCCGACTGTTCATGAGCGTGGAAGATGAAATTCACGTGGAGAGATTATCGGGACCATTCGAGCACATTGCAGCAGGAATCATATCGATGCCGATCGATTTACCAGGAACGCCATTCAATAGAGCAATAAAGGCGTCAAAGTTCATCAGAAAGGAAGTGGTGGCGATCGTGAGGCAGAGGAAACAGGATTTGGCGGAAGGAAAGGCGTTGGCGACGCAGGATATTTTGTCCCACATGCTTCTAACGTGCGATGAGAATGGTGTGTACATGAACGAATCAGATATCACCGATAAGATTCTTGGGTTGTTGATCGGCGGCCATGACACTGCCAGTGTTGCATGCACCTTCATCGTTAAGTTCCTCGCTGAGCTTCCTCATATCTACGATGCTGTATATACAGAGCAAATGGAAATAGCAAGAGCAAAAGCGGAAGGGGAAACGTTGAAGTGGGAAGACATTAAGAAGATGAAATATTCATGGAATGTGGCTTGTGAGGTTCTAAGAATTGCTTCCCCACTCCAAGGTGCCTTTAGGGAAGCCTTAAGTGACTTCGTTTTCAATGGTTTTTTCATTCCCAAGGGTTGGAAGCTATATTGGAGTGCAAACTCGACACACAAAAACCCCGAGTACTTCCCAGAACCTTATAAGTTCGATCCGGGAAGATTTGAAGGAAATGGACCATTACCCTACACATTTGTGCCGTTTGGGGGAGGGCCAAGGATGTGCCCTGGTAAGGAGTATGCAAAGCTTGAGATTTTGGTGTTCATGCATAATTTGGTGAAGAGATTCAAATGGACAAAGCTTCTTGAAAATGAAAACATCATTGTTAACCCAATGCCAATCCCTCAAAAAGGTCTCCCAGTTCGCCTTTTTCCTCATCAACCTCTTTCTCTTTAA 1452 44.7 MELFLISLLILLFFFLSLTLFILFHNHKSLFSYPNTPPGAIGLPILGESVEFLSSGWKGHPEKFIFDRLNKYKSDVFKTSIVGVPAAIFCGPICNKFLFSNENKLVTPWWPDSVNKIFPSTTQTSTKEEAKKLKKLLPQFLKPEALQRYIGIMDELAERHFNSFWKNREEVLVFPLAKSFTFSIACRLFMSVEDEIHVERLSGPFEHIAAGIISMPIDLPGTPFNRAIKASKFIRKEVVAIVRQRKQDLAEGKALATQDILSHMLLTCDENGVYMNESDITDKILGLLIGGHDTASVACTFIVKFLAELPHIYDAVYTEQMEIARAKAEGETLKWEDIKKMKYSWNVACEVLRIASPLQGAFREALSDFVFNGFFIPKGWKLYWSANSTHKNPEYFPEPYKFDPGRFEGNGPLPYTFVPFGGGPRMCPGKEYAKLEILVFMHNLVKRFKWTKLLENENIIVNPMPIPQKGLPVRLFPHQPLSL* 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29234671 29238789 + CsaV3_1G044060.1 Csa01g03290 517787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g03290 483 Pfam Cytochrome P450 37 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 SUPERFAMILY Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Csa01g03290 483 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 Gene3D Cytochrome P450 27 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g03290 483 PANTHER CYTOCHROME P450 26 10 476 - -
Csa01g03290 483 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 10 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g03290 Csa-Chr1:29234671 Csa03g01774 Csa-Chr3:13322655 1.59E-112 dispersed
Csa01g03290 Csa-Chr1:29234671 Csa04g02406 Csa-Chr4:24307454 4.43E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g03290 K20667 - csv:101206033 951.814