Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g03356 ATGATCTGTGCTGTGAAACAATGCTCTAGGGGTATTCATTGCTCTGATGGTGTTATTCGGAGCAAAACCTCGGTTCCTTCTCAACGATCCTCGTTTCTTCCACCCCTTCCGGTGCAAAAACCTCGAAACTCCGCTATTTCTGTTTATAAGGCTGTACATGTTTCTTCGCTTGAGAATTTTGGAACACTTGGTGTTCGTAAAGCGAATCTGATCAAATGTGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGAATCGAGCATTGAGTTGCCGCAAAGTCAGGTCCCTTCTGAGGCCGCGAAGAAGGTGAAAATTGGATCCTATTTCGCTCTTTGGTGGGCTTTGAACGTGGTTTTCAACATCTATAATAAGAAGGTGTTGAATGCTTACCCATATCCATGGTTGACCTCGACTTTGTCGCTTGCCGCCGGATCTCTGATCATGTTGATCTCATGGATGACGAGAATTGCCGAAGCTCCCAAAACCGATGTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACCGTGAGCATGTCAAAGGTTGCAGTTTCATTCACTCACATCATTAAGAGTGGTGAACCTGCTTTTAGTGTCTTGGTTTCAAGGTTCTTGCTGGGTGAGACCTTCCCACTTCCTGTCTACTTGTCACTCCTCCCGATCATCGGTGGATGTGCTCTCGCTGCTGTGACCGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATATTTTCAAAGAAGGGCATGAAGGGAAAATCTGTTAGCGGGATGAACTACTATGCATGTTTATCGATTTTGTCTCTGTTACTCTTGACGCCATTTGCATTTGCTGTGGAGGGACCACAATTGTGGGCTGCTGGATGGCAAACAGCAGTTTCTCAAATTGGACCTCATTTCGTTTGGTGGGTTGCAGCGCAAAGTATATTCTACCATCTCTATAATCAGGTGTCTTACATGTCCTTGGATGAGATTTCTCCCTTGACGTTTAGCATTGGAAACACCATGAAACGTATATCAGTCATAGTTTCTTCCATCATCATCTTCCGCACACCAGTGCAGCCAGTCAACGCTCTTGGAGCTGCCATTGCAGTTCTTGGAACCTTCATATATTCGCAGGCAAAGCAATAA 1191 45.42 MICAVKQCSRGIHCSDGVIRSKTSVPSQRSSFLPPLPVQKPRNSAISVYKAVHVSSLENFGTLGVRKANLIKCEAYEAERSQPIESSIELPQSQVPSEAAKKVKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDVEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLLLTPFAFAVEGPQLWAAGWQTAVSQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQAKQ* 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30125950 30130567 - CsaV3_1G044720.1 Csa01g03356 517853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g03356 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
Csa01g03356 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Csa01g03356 396 PANTHER SOLUTE CARRIER FAMILY 35 30 396 - -
Csa01g03356 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
Csa01g03356 396 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 30 396 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g03356 Csa-Chr1:30125950 Csa06g03531 Csa-Chr6:28754571 0 dispersed
Csa01g03356 Csa-Chr1:30125950 Csa03g00529 Csa-Chr3:4405822 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g03356 K15283 - csv:101220046 746.503