Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g03418 | ATGTTAACACCCTCAGCAACTCCTGGTGGTGTTGGTCTCACTCCTCGGAGTGGCATGACACCAGCTAGGGATGCTTACTCGTTTGGCATGACTCCAAAAGGTACACCTATTAGAGATGAGTTACGTATCAATGAAGATATGGATGCACATGATAGTGCAAAACTGGAGTCTCAAAGACAAGCTGATTTGAGAAGGAATCTTAGCCTAGGATTAGGAAATCTTCCACAGCCTAAGAATGAGTACCAGGTAGTTATGCAACCAATTCCTGAAGACAAAGAAGAACCTGAGGAGACGATTGAAGAGGACATGTCTGATAGGATTGCTAGAGAACGAGCTGAGGAAGAAGCAAGGCAGCAGGCTTTGCTTAGGAAGAGATCAAAAGTGCTACAAAGGGAGCTTCCACGGCCTCCTACTGCGTCTTTGGAACTTATTAGAAATTCTTTGATGAGAGCTGATGGAGACAAGAGTTCATTTGTTCCACCTACCCCTATTGAGCAAGCTGATGAAATGATAAGAAAGGAACTTCTAGCTTTGTTAGAGCATGATAACGCAAA | 554 | 43.86 | MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEEPEETIEEDMSDRIARERAEEEARQQALLRKRSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAX | 185 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 31122239 | 31122792 | - | CsaV3_1G045340.1 | Csa01g03418 | 517915 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g03418 | 185 | PANTHER | - | 3 | 184 | - | - | |
Csa01g03418 | 185 | Pfam | pre-mRNA splicing factor component | 10 | 184 | IPR021786 | - | |
Csa01g03418 | 185 | PANTHER | CELL DIVISION CYCLE 5-LIKE PROTEIN | 3 | 184 | - | - | |
Csa01g03418 | 185 | MobiDBLite | consensus disorder prediction | 79 | 114 | - | - | |
Csa01g03418 | 185 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g03418 | Csa-Chr1:31122239 | Csa07g02087 | Csa-Chr7:20118421 | 1.86E-119 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g03418 | K12860 | - | csv:101205030 | 331.257 |