Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g03536 ATGGCATCCTTCACTAAACCCTTCTCAATCTTCTTGTTTCTCATCTGTTTTTTCTCAATCCAAGCTGTTTCACAATCTGATGAATGTGAAACCACAGCCAATTCATGTACAAACAAACACAAAGCTTTACGTCTTAAAATCATTGCCATTTTCTCGATCCTCATTGCGAGTGTCATTGGTGTCGGCTCGCCACTCGTCACCCGATCGATCCCAATGTTGCACCCTGATAGAAACATGTTTGTCATTCTCAAAGCTTTCGCAGCAGGTATCATTCTCGCCACCGGTTTCATGCATGTTTTGCCTGACTCTTTCGATATGCTTTGGTCGAATTGTCTCAAGGAGAATCCATGGCATAAGTTTCCCTTTTCGGGCTTCGTTGCTATGATGTCTGCCATCGTCACCCTCATGGTCGATTCTATGGCTACTAGTTTGTATACCAAGAAACATAACGAAGTTATGCCCGAGAATTCTCCGAGAGGAGGAGATGATCATGAGTTGCCTGTAGTGAGTGGTGGCCATTTCCATGGCCACCACCATATGGACACCAAAGAAACTAATGCTGGTTCTCAACTCTTGCGTTATCGTGTTGTTGCCATGGTTTTGGAGTTGGGAATTGTTGTCCATTCAGTTGTGATTGGACTTTCACTAGGAGCAACAAACGATACTTGCACAATCAAAGGTCTAGTGGCTGCTCTTTGTTTCCATCAAATGTTTGAAGGGATGGGTCTCGGTGGCTGTATTCTTCAGTGA 750 44.13 MASFTKPFSIFLFLICFFSIQAVSQSDECETTANSCTNKHKALRLKIIAIFSILIASVIGVGSPLVTRSIPMLHPDRNMFVILKAFAAGIILATGFMHVLPDSFDMLWSNCLKENPWHKFPFSGFVAMMSAIVTLMVDSMATSLYTKKHNEVMPENSPRGGDDHELPVVSGGHFHGHHHMDTKETNAGSQLLRYRVVAMVLELGIVVHSVVIGLSLGATNDTCTIKGLVAALCFHQMFEGMGLGGCILQ* 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32381584 32384538 - CsaV3_1G046520.1 Csa01g03536 518033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g03536 249 PANTHER ZINC/IRON TRANSPORTER 11 249 - -
Csa01g03536 249 Pfam ZIP Zinc transporter 44 249 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Csa01g03536 249 PANTHER ZINC TRANSPORTER 10-RELATED 11 249 - -
Csa01g03536 249 TIGRFAM zip: ZIP zinc/iron transport family 32 249 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g03536 Csa-Chr1:32381584 Csa06g03640 Csa-Chr6:29322423 1.36E-78 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g03536 K14709 - csv:101221552 484.952