Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00004 GGAGGCGAGGTTGTTGAAGATCACATGAAGCAGAAAGTGCACTTCACTGTTGAATGTCATGGTGGGATACCAAGGAGTACAGACGTTCATAGTACTTATGTGTCAAGTCATCGGGTTCGATCATGTTTAGAGGATGGATGTTTGTGGGATACCAATGGGCACATTTTCTATTCTCCTCTTCCTTGCTGTGTCCCTTTGCCTGGATTTGAAAACATACGGTTTTGTGTTTCACAATATGATGACAAAGACAGAGTATTGTTAAGAAATCTGTGTTTTGTACTTGGGGCCAAGTTTGTGGAGAAGCTGACAAAGAAGGTAACCCATCTAATATGCAAGTTCACCGATGGGACAAATTATGAGGCTGCTTGTAAATGGGGGAAACAATGCATTACAGCTGAATGGATATATGAGTGTGTCAGCCAGATTTTCCCGCCAGACTGTTCGCTTGTTGGTCAAGACCATTCAGAAACTTCTCCAATTGGTGCTTTATCTAACCAGTGGTCAAAAAGAGCTGAAAGAAAAGAAGATGTCGGCAATTCTACTACTGAAGATGGGACTGTGGGCATATGTGATGGCTTTAGTGAAACACAAACAGAGTCTCAGGTGTGTGCTATGCAATCCAGAAGGGGGAATGCAACTATACCCAACTCACAGGTTGATGACGGTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCAAATGCCGATCCTTCCAACAGGAGTCTAG 774 43.15 GGEVVEDHMKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTNYEAACKWGKQCITAEWIYECVSQIFPPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQVCAMQSRRGNATIPNSQVDDGEWELYPQVTALCIGNAKYFGGGMKIVQMPILPTGV* 258
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 118042 121257 - CsaV3_2G000040.1 Csa02g00004 518061
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00004 257 Pfam twin BRCT domain 73 134 IPR001357 -
Csa02g00004 257 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 1 141 - -
Csa02g00004 257 CDD BRCT 72 138 - -
Csa02g00004 257 ProSiteProfiles BRCT domain profile. 69 139 IPR001357 -
Csa02g00004 257 SUPERFAMILY BRCT domain 34 141 IPR036420 -
Csa02g00004 257 Gene3D BRCT domain 68 145 IPR036420 -
Csa02g00004 257 SMART BRCT_7 66 142 IPR001357 -
Csa02g00004 257 Gene3D BRCT domain 1 62 IPR036420 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00004 Csa-Chr2:118042 Csa04g01777 Csa-Chr4:17422137 1.87E-35 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00004 K10728 - csv:116401640 475.707