Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g00073 | ATGAAGATCGTTGAATTGGAAGAGGCTGGAAATGATCGGCAAAATGAAAAAATCGGTAGTGGTCAGATTGTGAAAGTCGATGCCAAAAGAGCTTTGGTTGGTGCTGGGGCTCGAATCTTGTTTTACCCTACCCTTTTGTATAACGTGCTTCGGAACAAAATGGAAGCTGAATTTAGATGGTGGGATGAAGTTGATCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTGCCAAGATTGAAGAAGCTTGGTGTCGGTGGTGTTATCACTCTCAATGAACCTTATGAAACTCTAGTTCCATCTTCCTTGTATTATCGCCATGGAATCGATCACTTAAAGATCCCGACGAGGGATTATTGTTTTGCTCCTAAGTTTTCTGATATTAGCCGAGCTGTTGACTTTATTCACAGAAATGCATCATCTGGTAAAACGACATACGTCCATTGTAAAGCAGGACGAGGAAGGAGCACAACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCACTGGACTACGTGCGTTCTAGAAGACCACGCGTGTTGCTCGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCGTGGACCCGTTACATGTTCTAGCTCACTCTCAGGAGGAGATGCAGTCCTCATTACGAAAGATGATTTAGAAGGATATCATGGTACTTGCATCGACAGTGCGGGTAGAGACCTTGCAGTAGTCCCTTGGATGGGTAAGTCAAAGCCGATGATAGCAAGGTTGTCCTGCCTCTTTTCCTCTTTGATAGTTCATGGAAGTACTGGATCTCTTATTAAGCGTCTACCCATACCGGAGGCTCGTGCATGCTGA | 858 | 45.57 | MKIVELEEAGNDRQNEKIGSGQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEVDQFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNASSGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALDYVRSRRPRVLLAPSQWEAVQEYSNRGPVTCSSSLSGGDAVLITKDDLEGYHGTCIDSAGRDLAVVPWMGKSKPMIARLSCLFSSLIVHGSTGSLIKRLPIPEARAC* | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 540334 | 543618 | - | CsaV3_2G001720.1 | Csa02g00073 | 518130 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g00073 | 285 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 128 | 196 | IPR000387 | GO:0016311|GO:0016791 | |
Csa02g00073 | 285 | CDD | PTPMT1 | 60 | 204 | IPR044596 | GO:0004721 | |
Csa02g00073 | 285 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 53 | 202 | IPR029021 | - | |
Csa02g00073 | 285 | SMART | dsp_5 | 63 | 204 | IPR020422 | GO:0006470|GO:0008138 | |
Csa02g00073 | 285 | Gene3D | Protein tyrosine phosphatase superfamily | 60 | 205 | IPR029021 | - | |
Csa02g00073 | 285 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 60 | 207 | IPR020422 | GO:0006470|GO:0008138 | |
Csa02g00073 | 285 | Pfam | Dual specificity phosphatase, catalytic domain | 100 | 203 | IPR000340 | GO:0008138|GO:0016311 | |
Csa02g00073 | 285 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 149 | 159 | IPR016130 | GO:0016311|GO:0016791 | |
Csa02g00073 | 285 | PANTHER | OS01G0739200 PROTEIN | 1 | 285 | - | - | |
Csa02g00073 | 285 | PANTHER | - | 1 | 285 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g00073 | Csa-Chr2:540334 | Csa03g00252 | Csa-Chr3:2015872 | 1.49E-101 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g00073 | - | - | csv:101220751 | 580.096 |