Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00125 ATGTCAACACCTACTCCGGCGCCGACGTCTCCGCCGGCGACCAATACGACATCCCCACCGCCACCGACCCCTACTGCTCCACCCCCATCAACTCCAGCACAACCGCCGCCGTCTACTACACCGCCGCCAACTACCACTCCGTCGCCACCTCCACCTACCGCTGCATCGCCGCCAGCTCCTTCGCAGCCTCCGCCAACTTCTGCGCCACCTCCAGCCACCCCATCACGGCCTCCGCCGTCTACTCCAGAGCCCGCCCCGCCCACTGCAACTCCCTCACCACCGGCTTCCACTCCTCCGCCGTCCAGACCTTCGAGTTCTCCACCTCCTCCGTCTTCTACTACCTCTCCGTCTCCACCAACTGGCCGTAGTCCGCCGCCTCCGACTTCTCATACGCCGTCTACTCCGTCCAGAACGCCTCCTCCTCCTCCCTCAACGCCTTCCTCATCCTCGTCTAATATATCAACCGGACTTGTCGTCGGAATAGCAATTGGTGGAGTGGTAATTGTTCTTCTGCTGAGTATATTATGCCTTTGTTGTACAAAGAAAAGAAGAAGACGACGCGATGAAGAGGGATTTTATCCACACCCTCCGCCTGACCCTAAAGTTGACCCTTATGCTGGTCAGCAGCAATGGCAGAACAATGCTCCTCTACCGCCTGATCCTTTAGTTGGGATGGTGCCAAAGCCATCTCCTCCACCGGTAGTTGCATCCCGACCCCCGCATTCACCAACTGGCATTCGTCCTCCACTTCCACCTCCGCTCTATATGAGTAGCAGTGGAGGTTCGGGCTCTATGTATTCTGGGCCTGAAACGCCGCTCCCTCCGCCACCTCCCCCTCATATGGCCTATGGTTTCTCAAAGAGTACTTTTACTTATGAGGAATTGGCAATGGCCACGGACGGCTTCTCGGATGCGAATCTCCTTGGACAAGGTGGATTTGGATATGTGCATAGGGGAGTTCTTCCTAATGGTAAGGAAGTTGCTGTCAAGCAGTTGAAAGCTGGGAGTGGGCAGGGCGAACGAGAATTTCAAGCCGAAGTTGATATCATCAGCCGAGTTCATCATAAACATCTTGTTTCTTTGGTTGGATATTGCATAACTGGGTCTCAAAGATTGCTTGTTTATGAGTTTGTTGCTAACAACACTTTGGAGTTCCATTTACATGGTAAAGGGCGGCCGACCATGGATTGGCAGACTAGACTTAAAATCGCTTTAGGATCAGCAAAAGGACTAGCTTATATTCACGAGGACTGTCACCCGAAAATCATTCATCGTGACATTAAAGCTGCTAACATATTGTTGGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTTGCAAAGTTTACCTCTGATGTCAATACCCATGTATCAACTCGAGTGATGGGTACTTTTGGGTATCTTGCTCCAGAGTATGCCTCTAGTGGCAAACTAACTGAAAAATCAGACGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACTGGTCGTCGACCAGTCGATATGAGTAATACTGCTATGGAAGATAGCCTCGTAGACTGGGCTAGGCCGCTAATGAACCGAGCTTTAGAAGATGGAAACTTCGATGTTTTGGTCGATCCAAGGCTGCAGAACAACTACAACCACAATGAAATGGCTCGCATGGTTGCCTGCGCTGCTGCTTGTGTTCGTCATTCTGCCAAGCGTCGACCACGAATGAGTCAGGTAGTACGAGCGCTCGAAGGAGACTCTTCGTTGTCGGATCTCAACGAAGGAGTGAAACCCGGGCAGAGCTCAATGTACAGTTCTCATGGAAGCTCGGACTACGACACCCATCAGTACAACGAGGACTTGAGAAAGTTTAGAAAAGTGGCATTGGGAAGCACAGAATATGGAGCGAGCAGCGAGTACAGCGGACCGACAAGCGAGTACGGGCTGTATCCGTCGGGATCAAGCAGCGAAGGGCAAACCACAAGAGAAATGGAGACGAGAACAGCAAAGAAAGAGAGTGGAGGCTTTAGTGGACGCTCTTGA 2019 51.61 MSTPTPAPTSPPATNTTSPPPPTPTAPPPSTPAQPPPSTTPPPTTTPSPPPPTAASPPAPSQPPPTSAPPPATPSRPPPSTPEPAPPTATPSPPASTPPPSRPSSSPPPPSSTTSPSPPTGRSPPPPTSHTPSTPSRTPPPPPSTPSSSSSNISTGLVVGIAIGGVVIVLLLSILCLCCTKKRRRRRDEEGFYPHPPPDPKVDPYAGQQQWQNNAPLPPDPLVGMVPKPSPPPVVASRPPHSPTGIRPPLPPPLYMSSSGGSGSMYSGPETPLPPPPPPHMAYGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVDIISRVHHKHLVSLVGYCITGSQRLLVYEFVANNTLEFHLHGKGRPTMDWQTRLKIALGSAKGLAYIHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMSNTAMEDSLVDWARPLMNRALEDGNFDVLVDPRLQNNYNHNEMARMVACAAACVRHSAKRRPRMSQVVRALEGDSSLSDLNEGVKPGQSSMYSSHGSSDYDTHQYNEDLRKFRKVALGSTEYGASSEYSGPTSEYGLYPSGSSSEGQTTREMETRTAKKESGGFSGRS* 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 866565 870359 - CsaV3_2G002240.1 Csa02g00125 518182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00125 672 SMART serkin_6 302 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g00125 672 MobiDBLite consensus disorder prediction 220 255 - -
Csa02g00125 672 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g00125 672 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 65 658 - -
Csa02g00125 672 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Csa02g00125 672 Gene3D Phosphorylase Kinase; domain 1 280 377 - -
Csa02g00125 672 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 65 658 - -
Csa02g00125 672 MobiDBLite consensus disorder prediction 626 654 - -
Csa02g00125 672 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672|GO:0006468
Csa02g00125 672 MobiDBLite consensus disorder prediction 585 604 - -
Csa02g00125 672 PRINTS Proline rich extensin signature 4 20 - -
Csa02g00125 672 PRINTS Proline rich extensin signature 24 41 - -
Csa02g00125 672 PRINTS Proline rich extensin signature 43 68 - -
Csa02g00125 672 MobiDBLite consensus disorder prediction 185 276 - -
Csa02g00125 672 Gene3D Transferase(Phosphotransferase) domain 1 378 588 - -
Csa02g00125 672 MobiDBLite consensus disorder prediction 581 606 - -
Csa02g00125 672 MobiDBLite consensus disorder prediction 625 672 - -
Csa02g00125 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Csa02g00125 672 SUPERFAMILY Protein kinase-like (PK-like) 277 575 IPR011009 -
Csa02g00125 672 MobiDBLite consensus disorder prediction 1 152 - -
Csa02g00125 672 MobiDBLite consensus disorder prediction 1 147 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa01g01727 Csa02g00125 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01727 Csa-Chr1:13899884 Csa02g00125 Csa-Chr2:866565 0 dispersed
Csa02g00125 Csa-Chr2:866565 Csa04g00511 Csa-Chr4:3365923 0 dispersed
Csa07g00338 Csa-Chr7:2518563 Csa02g00125 Csa-Chr2:866565 1.93E-74 dispersed
Csa02g00125 Csa-Chr2:866565 Csa05g03083 Csa-Chr5:30852236 9.83E-155 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77867 PF07714 PK_Tyr_Ser-Thr 2.00E-46 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00125 - - csv:101208385 921.383