Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00154 ATGCTAAGGAATTTGTATCTTCAGGATAATGCTTTCTCCGGAGAGTTTCCGTCGAGCTTGATTCGGCTGACTCGGCTGACTCGGCTGGATTTGTCGTCGAATGAATTTTCCGGTCCGATTCCGGCTTCTGTTGACAATCTAACTCACTTGAGTGGGATTTTCTTACAGAACAATGGATTCTCCGGTTCACTCCCGAATATCTCCGCCCTTAACTTAACAAGCTTCAATGTCTCTAACAACAAACTCAACGGCTCGATTCCGAATTCCTTAGCGAAATTCCCCGCCTCTTCCTTCGCCGGAAACTTAGATCTCTGCGGCGGACCATTCCCACCTTGCAGCCCATTAACTCCTTCTCCATCTCCATCACAAATCCCCCCACCATCCAACAAAAAATCTAAAAAACTCTCCACGGCAGCAATTATCGGAATCGTAATCGGCGCCGTTTTCGCAGCTTTTCTCCTCCTCCTCATCCTAATCCTCTGCATTCGTCGCCGGTCCAACAAAACACAGACGAAATCACCAAAGCCACCAACGGCGGTGGGAACGGCAGCGAGATCTATTCCAGTAGCGGAAGCTGGAACATCGTCGTCGAAAGACGACATTACCGGAGGGTCAGTGGAGGCGACGGAAAGGAACAAGCTGGTGTTTTTCGAAGGTGGGATTTACAACTTTGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTATTGGGGAAAGGAAGCGTCGGAACGTCGTATAAGGCGGTGCTAGAAGAAGGGACGACGGTGGTGGTGAAACGGCTGAAGGATGTGGTGGTGACGAAAAAGGAATTTGAGAATCAAATGGAGATTTTGGGGAAAATTAAACATGAAAATGTGGTTCCACTAAGAGCTTTTTACTTCTCCAAAGATGAGAAATTGCTTGTTTATGATTATATCTCCACCGGAAGTTTGTCGGCCAGCCTTCACGGAAGCCGAGGCTCCGGGAGGACGCCGTTGGATTGGGATTCAAGAATGAGAATAGCACTAAGCGCCGGAAGAGGATTAGCCCATCTCCACCTCACCGGCAAGGTGGTTCACGGCAACATTAAATCCTCCAACATTCTTCTCCGTCCAGACCACGACGCCTGCATTTCCGATTTCGGTCTAAACCCACTTTTCGGCACCGCCACACCGCCGAATCGCGTCGCCGGCTACCGTGCACCGGAGGTCGTCGAAACCCGAAAGGTCACATTCAAATCCGACGTTTACAGCTACGGAGTTCTCCTCCTGGAACTCCTAACAGGAAAAGCCCCCAACCAACAATCCCTCGGTGAGGACGGAATCGACCTTCCACGGTGGGTTCAATCCGTCGTCCGGGAAGAATGGACGGCAGAGGTTTTCGACGCGGAGCTGATGCGGTTCCATAACATCGAAGAAGAGATGGTTCAGTTGCTGCAGATTGCAATGTCCTGTGTTTCGACGGTTCCCGATCAACGACCGGCGATGCCGGAAGTTGTACGGATGATCGAAGATATGAGTAGTCATAGAAGTGAGACGGATGATGGGTTGCGTCAGTCTTCCGATGAGCCTTCGAAAGGATCAGACGTGAATACGCCACCGGCGGAGTCTAGAACTCCACCGGGAGTGACGCCGTAG 1617 50.96 MLRNLYLQDNAFSGEFPSSLIRLTRLTRLDLSSNEFSGPIPASVDNLTHLSGIFLQNNGFSGSLPNISALNLTSFNVSNNKLNGSIPNSLAKFPASSFAGNLDLCGGPFPPCSPLTPSPSPSQIPPPSNKKSKKLSTAAIIGIVIGAVFAAFLLLLILILCIRRRSNKTQTKSPKPPTAVGTAARSIPVAEAGTSSSKDDITGGSVEATERNKLVFFEGGIYNFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFENQMEILGKIKHENVVPLRAFYFSKDEKLLVYDYISTGSLSASLHGSRGSGRTPLDWDSRMRIALSAGRGLAHLHLTGKVVHGNIKSSNILLRPDHDACISDFGLNPLFGTATPPNRVAGYRAPEVVETRKVTFKSDVYSYGVLLLELLTGKAPNQQSLGEDGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMSCVSTVPDQRPAMPEVVRMIEDMSSHRSETDDGLRQSSDEPSKGSDVNTPPAESRTPPGVTP* 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1087160 1092335 + CsaV3_2G002530.1 Csa02g00154 518211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00154 538 ProSiteProfiles Protein kinase domain profile. 231 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g00154 538 PANTHER OS05G0480400 PROTEIN 2 517 - -
Csa02g00154 538 PANTHER OS05G0588300 PROTEIN 2 517 - -
Csa02g00154 538 Gene3D Ribonuclease Inhibitor 1 69 IPR032675 -
Csa02g00154 538 MobiDBLite consensus disorder prediction 498 538 - -
Csa02g00154 538 Pfam Protein kinase domain 234 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g00154 538 Gene3D Ribonuclease Inhibitor 72 113 IPR032675 -
Csa02g00154 538 Gene3D Transferase(Phosphotransferase) domain 1 306 519 - -
Csa02g00154 538 SUPERFAMILY L domain-like 2 96 - -
Csa02g00154 538 Gene3D Phosphorylase Kinase; domain 1 199 305 - -
Csa02g00154 538 MobiDBLite consensus disorder prediction 498 515 - -
Csa02g00154 538 MobiDBLite consensus disorder prediction 516 530 - -
Csa02g00154 538 SUPERFAMILY Protein kinase-like (PK-like) 235 496 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa01g02093 Csa02g00154 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00154 Csa-Chr2:1087160 Csa06g01121 Csa-Chr6:9313912 0 dispersed
Csa05g01191 Csa-Chr5:12337268 Csa02g00154 Csa-Chr2:1087160 5.28E-110 transposed
Csa05g02914 Csa-Chr5:29618253 Csa02g00154 Csa-Chr2:1087160 8.54E-62 transposed
Csa07g00488 Csa-Chr7:3536531 Csa02g00154 Csa-Chr2:1087160 1.99E-08 transposed
Csa04g00935 Csa-Chr4:6987610 Csa02g00154 Csa-Chr2:1087160 5.73E-102 transposed
Csa01g02093 Csa-Chr1:18117705 Csa02g00154 Csa-Chr2:1087160 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77868 PF00069 Pkinase 3.40E-37 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00154 - - csv:101205802 965.296