Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00167 ATGGCGGTCGGTTGGATTTTTTGTTGGTTTTTGTTCGTGCTGGTTCTAAGGGCGGTGGTGGTTCTTTGGTGGCGGCCGAGAAGAATAGAACAGCATTTCTTTCGTCAAGGAATTCGTGGCCCTCCCTATCGTTTCTTCATTGGAAATGTTAAGGAACTGGTTGGCATGATGATTAAAGCTTCTTCAGATCATTCTTTTCCTAATTCTTCTCATAATATTCTGCCTCGTGTTCTTCCTTTTTATCATCATTGGAAGAAAATTTATGGGTCAAAATTTCTAGTGTGGTTTGGACCGACGGTGAGATTGGCGGTGTCTGATCCAGATTTGATAAGAGAAATATTCACATCGAAGTCAGAATTTTGTGAGAAAAATGAACCACACCCACTTGTTAAACAGCTAGAAGGTGATGGACTCCTTAGCCTCAAAGGCCAAAAATGGGCTCTTCATCGAAAGATCATCTCTCCTTCCTTTCACATGGACAATCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTTGTGGACATGTTGGAGAAATGGTCAGCATTAATGACGTCAGCAGATTCCGATGAGGTGGAAATTGAAGTATCCGAATGGTTCCAAACCCTAACCGAAGATGTCATCACTAGAACAGCATTTGGCTCAAGCTATGAAGATGGAAAAGCCATTTTCCGGTTACAAGCCCAACAAATGGTCCTTGCTTCTCAAGCCTTTGAAAAAGTTTTCATCCCCGGCTACCGATTCTTGCCTACGAGAACGAACGTGAATTCGTGGAGATTGGATAAAGAAATAAGGAAATCGTTGATGAAATTGATCGACCGACGACGAGAGAATTCGATTGAGACGAGCTCGAAGGATTTACTAGGGTTAATGATTAGGGCATCAAAGTCATCTCCATCATCAACAATCACTGTTAATGACATTGTTGAAGAGTGCAAAGGGTTTTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGGTACAGGCACGTGATGAAGTACTAAGGGAGTGTGGAGCACGTGACATACCCTCCAAAGATGATGTTACAAAGCTCAAAATGTTGAGTATGATCATCAACGAATCGTTACGGTTATATCCGCCGACAGTGGCGACTATTCGACAAGCGAAAGTTGATGTGGAGCTTGGTGGTTACATGCTTCCACGAGGCACTGAGTTGTTGATACCGATTTTGGCGGTTCACCATGATCAAACGATATGGGGGAATGATGTGAATGAGTTCAATCCAGCGCGATTTGCCGAAGGTGTTGCAAAGGCAGCCAATCATCGAGTTGGGTTCATTCCGTTCGGGTTAGGAGCTCGAACCTGTATTGGCCAAAACCTAGCTATATTGCAAGCAAAGTTGGCTCTTGCACTCATACTCCAAAGATTCTCTTTTCGATTGGGACCCTCTTATCAACACTCACCAGCAGTTCAAATGCTACTTTATCCACGACATGGTGCACCTATTATCTTCAAGAAATTATCCACTCCATTAGCTCATCAAGATCAACAGTCATGA 1563 43.31 MAVGWIFCWFLFVLVLRAVVVLWWRPRRIEQHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDHSFPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVDMLEKWSALMTSADSDEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFEKVFIPGYRFLPTRTNVNSWRLDKEIRKSLMKLIDRRRENSIETSSKDLLGLMIRASKSSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVQARDEVLRECGARDIPSKDDVTKLKMLSMIINESLRLYPPTVATIRQAKVDVELGGYMLPRGTELLIPILAVHHDQTIWGNDVNEFNPARFAEGVAKAANHRVGFIPFGLGARTCIGQNLAILQAKLALALILQRFSFRLGPSYQHSPAVQMLLYPRHGAPIIFKKLSTPLAHQDQQS* 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1164961 1168312 + CsaV3_2G002660.1 Csa02g00167 518224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00167 520 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 Gene3D Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 Pfam Cytochrome P450 80 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 SUPERFAMILY Cytochrome P450 72 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00167 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Csa02g00167 520 PANTHER CYTOCHROMEA2 6 504 - -
Csa02g00167 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 504 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa01g01963 Csa02g00167 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00167 Csa-Chr2:1164961 Csa03g04190 Csa-Chr3:36743086 8.02E-142 dispersed
Csa05g02526 Csa-Chr5:26778582 Csa02g00167 Csa-Chr2:1164961 3.43E-127 dispersed
Csa01g02849 Csa-Chr1:24999782 Csa02g00167 Csa-Chr2:1164961 5.09E-138 transposed
Csa01g02967 Csa-Chr1:26019911 Csa02g00167 Csa-Chr2:1164961 4.88E-142 transposed
Csa02g00895 Csa-Chr2:8330681 Csa02g00167 Csa-Chr2:1164961 1.13E-103 transposed
Csa02g00949 Csa-Chr2:8951183 Csa02g00167 Csa-Chr2:1164961 1.04E-104 transposed
Csa03g01719 Csa-Chr3:12874563 Csa02g00167 Csa-Chr2:1164961 7.33E-100 transposed
Csa03g02064 Csa-Chr3:16757255 Csa02g00167 Csa-Chr2:1164961 5.72E-113 transposed
Csa04g02548 Csa-Chr4:25135109 Csa02g00167 Csa-Chr2:1164961 9.82E-32 transposed
Csa05g00465 Csa-Chr5:3021204 Csa02g00167 Csa-Chr2:1164961 8.31E-94 transposed
Csa05g02136 Csa-Chr5:24470410 Csa02g00167 Csa-Chr2:1164961 1.43E-16 transposed
Csa05g03102 Csa-Chr5:31027128 Csa02g00167 Csa-Chr2:1164961 2.86E-115 transposed
Csa06g02632 Csa-Chr6:23173773 Csa02g00167 Csa-Chr2:1164961 1.67E-36 transposed
Csa01g01963 Csa-Chr1:16501446 Csa02g00167 Csa-Chr2:1164961 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00167 K15639 - csv:101208789 1019.99