Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00266 ATGCATTCAGACATTTTCGACGGTGAAGTCTACAAATACTATTCAGAAGGTGAATGGAAGAAATCCTCCTCAGGGAAATCCGTTGCCATCATCAACCCCACTACTAGGAAGACCCAGTACAGAGTTCAAGCTTGTAACCAAGAGGAGGTTAATAAAGTGATGGAAATAGCCAAATCTGCTCAGAAATTATGGGCAAAGACTCCATTGTGGAAGAGAGCAGAGCTTCTTCATAAAGCTGCTGCAATTTTGAAAGAACACAAAGCTCCCATTGCTGAGTGTTTGGTGAAGGAAATTGCTAAACCAGCCAAAGATGCAGTCACTGAGGTTGTGAGGTCTGGGGATCTTGTTTCATATTGTGCTGAAGAAGGTGTTAGGATTTTGGGTGAAGGGAAGTTCTTGGTTTCTGATAGTTTCCCTGGAAATGAAAGGACCAAATATTGCCTTACTTCCAAGATCCCTCTTGGTGTGATTTTAGCCATTCCTCCATTCAACTATCCTGTCAATCTGGCTGTTTCAAAAATTGCCCCGGCTTTAATTGCTGGAAATTCTATTGTACTCAAGCCTCCAACTCAGGGCGCTGTTGCTGCTCTCCACATGGTACATTGCTTCCATCTAGCTGGTTTTCCTAAAGGCCTTATTAGTTGTGTCACGGGAAAAGGTTCCGAGATTGGTGATTTCCTCACAATGCATCCGGGTGTCGACTGTATAAGCTTTACTGGTGGGGATACCGGTGTTGCAATTTCAAAGAAGGCAGGCATGATACCTCTTCAGATGGAACTGGGGGGCAAAGACGCCTGCATTGTGCTCGAGGATGCAGATCTTGATTTAGTTGCCGCTAACATCATAAAGGGAGGCTTTTCTTACAGTGGCCAAAGGTGTACTGCCGTCAAGGTTGTTTTGGTAATGGAATCTGTCGCAGATGCTTTAGTCGAGAAAGTAAAGGCACGAGTGGCTAAATTAACTGTTGGTGCCCCTGAAGACGACTCGGACATTACTCCAGTTGTGACTGAGTCATCGGCAAACTTCATTGAAGGACTGGTTATGGATGCAAAGGAAAAGGATGCAACATTTTGCCAAGAGTACAAAAGAGAGGGCAACCTAATTTGGCCCTTGTTATTAGATAATGTTAGGCCTGATATGAGGATTGCTTGGGAGGAACCTTTTGGCCCAGTTTTGCCAGTCATTAGGATCAATTCTGTTGAAGAAGGAATCCACCATTGTAATGCTAGCAATTTTGGACTTCAGGGATGTGTCTTCACGAAGGACATCAACAAGGCGATATTGATAAGCGACGCAATGGAAACCGGAACAGTTCAAATCAACTCAGCACCTGCTCGAGGACCCGACCATTTCCCATTCCAGGGAATCAAGGACAGTGGAATTGGTTCTCAAGGTGTTACTAACAGCATCAACATGATGACCAAAGTGAAGACCACAGTTATCAACTTGCCAACACCGTCCTACACCATGGGGACCAAGTCCATTAGTAAGGGAGCCCTAGGGTCCAAATTGTGA 1515 44.82 MHSDIFDGEVYKYYSEGEWKKSSSGKSVAIINPTTRKTQYRVQACNQEEVNKVMEIAKSAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVDCISFTGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVKARVAKLTVGAPEDDSDITPVVTESSANFIEGLVMDAKEKDATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKTTVINLPTPSYTMGTKSISKGALGSKL* 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1824868 1830338 + CsaV3_2G003650.1 Csa02g00266 518323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00266 504 PANTHER ALDEHYDE DEHYDROGENASE 3 491 - -
Csa02g00266 504 Pfam Aldehyde dehydrogenase family 19 478 IPR015590 GO:0016491
Csa02g00266 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 17 478 IPR016162 GO:0016491
Csa02g00266 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 262 452 IPR016163 GO:0016620
Csa02g00266 504 SUPERFAMILY ALDH-like 10 482 IPR016161 GO:0016491
Csa02g00266 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 258 265 IPR029510 GO:0016491
Csa02g00266 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 286 297 IPR016160 GO:0016491
Csa02g00266 504 CDD ALDH_F11_NP-GAPDH 10 482 - -
Csa02g00266 504 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 3 491 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00266 Csa-Chr2:1824868 Csa06g01146 Csa-Chr6:9553079 3.22E-58 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00266 K00131 - csv:101208699 959.518