Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00267 ATGAGACTCACCAACTCTCTCCCGGACCTCCATACCCATCGCCGTAACCCTCCGCAGGAGACCGACGCCTCTCAACTCCACCACCACCACCACCAACTTCAAACCTCTCTCTTTCATCCTTCTACCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCACTGTCCCCTCTCCCTGGGAACTTCCCCCCGGTCTCCCTTCCCAACCATTGCCGCCATCTAATCCTGACAATGTTGAGTTTCACGTCGGCGATACAACTCCGGCGGCTAAAATGGCCATGTCCTTGCTTCAACAGCAGTTACTCATGTCGAGAGGAATCGTCCCTGCCTCCGCTGGCGATGATTGCGGTCTTCTTCCAATGCCTGGTAACAACGTCGTTGAAGTAGACGGCTCTTCTTCTTCGTCTTTCAAATGCCCTAATCCGACTGATCATGGTTCTGTCGTTCCTTCTCTTTTCAACGAATTCGCCGGGTTTCTGAACTCGACCGGTCCCGGCAGCCAGAATCAGAATCAATCTCAGGGGAACTCAAACTCTCAGATACCGAACTTCGGAGGTCCGGTATCAGCCAGTACACCACCTCCGGCCGGGCCTAGCTCCTGCGGCGGTGCTGCAGCAGCAGCAGCACCGGGTCAGCCCCGGCAGCGAGTCAGAGCTCGGAGAGGACAAGCCACAGATCCTCATAGTATAGCCGAAAGATTACGGAGAGAGCGAATTGCGGAGAGAATGAAAGCTCTACAAGAACTTGTTCCCAACGCTAACAAGACAGACAAGGCTTCTATGCTGGATGAGATCATAGACTATGTAAAGTTCCTCCAGCTTCAAGTCAAAGTTCTGAGTGTCAGCAGGTTGGGCGGTGCCACTGCAGCCATGCCTTCTCGTCTACCCGATCTTTCCACTGAGGGTGGCACTGAGTGCAACCAGTCCAACGGAACTAATGGGGCCAGTGGGCAGACTTCCACCGGAGCTCCGTCGAGTAATGACGCGATGACGGTGACGGAGCACCAGGTTGTGAAGTTAATGGAGGAGGACATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTCTGCCTCATGCCCATTTCTCTCGCCACCGCTATCTCCACCGCTACATGTCACAGCCGCCCAATCACGGCGTCCAAGGGCGGAGGAGATCCCCCCACCTCTCCCAGCCTTTCGGCGTTGACCGTCCAGTCAACTGCCTTGGGTAACGGCACCGTCGACAAACCCGTCAGAGACACCCTCTCCGTTTCCCGGCCGTGA 1266 55.77 MRLTNSLPDLHTHRRNPPQETDASQLHHHHHQLQTSLFHPSTFSSDDFLDQILSTVPSPWELPPGLPSQPLPPSNPDNVEFHVGDTTPAAKMAMSLLQQQLLMSRGIVPASAGDDCGLLPMPGNNVVEVDGSSSSSFKCPNPTDHGSVVPSLFNEFAGFLNSTGPGSQNQNQSQGNSNSQIPNFGGPVSASTPPPAGPSSCGGAAAAAAPGQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSVSRLGGATAAMPSRLPDLSTEGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVRDTLSVSRP* 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1833037 1837221 + CsaV3_2G003660.1 Csa02g00267 518324

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00267 421 MobiDBLite consensus disorder prediction 300 330 - -
Csa02g00267 421 PANTHER TRANSCRIPTION FACTOR BHLH69 40 382 - -
Csa02g00267 421 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 223 272 IPR011598 GO:0046983
Csa02g00267 421 MobiDBLite consensus disorder prediction 159 231 - -
Csa02g00267 421 MobiDBLite consensus disorder prediction 378 421 - -
Csa02g00267 421 Pfam Helix-loop-helix DNA-binding domain 228 273 IPR011598 GO:0046983
Csa02g00267 421 SMART finulus 229 278 IPR011598 GO:0046983
Csa02g00267 421 MobiDBLite consensus disorder prediction 159 187 - -
Csa02g00267 421 MobiDBLite consensus disorder prediction 385 406 - -
Csa02g00267 421 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 221 281 IPR036638 GO:0046983
Csa02g00267 421 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 40 382 - -
Csa02g00267 421 MobiDBLite consensus disorder prediction 295 330 - -
Csa02g00267 421 MobiDBLite consensus disorder prediction 7 29 - -
Csa02g00267 421 Gene3D - 218 280 IPR036638 GO:0046983
Csa02g00267 421 MobiDBLite consensus disorder prediction 1 34 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00267 - - - csv:101222794 727.243
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00628 Csa-Chr1:4002735 Csa02g00267 Csa-Chr2:1833037 3.44E-08 dispersed
Csa02g00267 Csa-Chr2:1833037 Csa07g01674 Csa-Chr7:17195587 1.12E-48 dispersed
Csa04g02472 Csa-Chr4:24696914 Csa02g00267 Csa-Chr2:1833037 2.64E-20 dispersed
Csa02g00267 Csa-Chr2:1833037 Csa01g01870 Csa-Chr1:15708212 1.24E-112 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi11g658 Blo01g00628 . Bda01g01945 . Bpe01g00640 Bpe02g02124 . . Cmo10g00511 Cmo11g00470 Cma05g01236 Cma12g01153 . Car12g01123 Sed08g1570 . . Bhi02g00893 Tan09g1547 Cmetu05g1643 . Hepe09g0590 . . . . . . . . . . . . Cone7ag0587 . Csa02g00267 . Cme02g01076 . . . . . . Bma01g00324 . . Cmo05g01263 Cmo12g01174 Cma10g00480 Cma11g00473 Car10g00442 . Cpe11g01019 Cpe07g01154 Bhi06g01808 . . . . . . Cla06g01221 Cam06g1362 Cec06g1407 Cco06g1413 Clacu06g1311 Cmu06g1282 Cre06g2093 Lsi11g00401 . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa06g02106 . 1 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 50.9 9.5e-80 293.9
Csa03g01221 . 54 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 60.0 1.3e-40 163.7
Csa03g02287 . 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 68.0 7.4e-61 230.7
Csa02g02706 . 5 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 56.1 3.1e-43 172.2
Csa01g01130 . 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 50.2 7.2e-40 161.0
Csa03g03991 . 50 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 62.3 5.7e-59 224.6
Csa03g00554 . 242 439 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 54.7 2.1e-47 186.8
Csa01g01146 . 220 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 61.3 3.3e-37 152.9
Csa03g02566 . 42 501 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 53.2 9.3e-111 397.5
Csa01g00990 . 51 523 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 50.2 3.5e-102 369.0
Csa02g01354 . 42 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 62.0 1.6e-50 196.8
Csa06g03326 . 48 300 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 57.8 2.6e-45 179.5
Csa06g03565 . 212 405 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 50.7 2.0e-42 170.2
Csa04g00386 . 110 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 56.7 7.3e-56 214.5
Csa03g00798 . 42 641 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 52.4 4.0e-156 548.5
Csa01g00988 CCT 175 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 65.9 7.5e-41 164.5
Csa06g01863 . 40 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 60.2 2.0e-42 169.5
Csa03g01527 . 41 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.5 2.1e-39 159.5
Csa06g01863 . 38 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.9 5.4e-45 177.9
Csa03g01527 . 41 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.5 1.3e-38 156.8
Csa04g00280 . 23 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.8 2.9e-43 171.8
Csa04g00280 . 21 154 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 68.1 1.5e-41 166.0
Csa06g02951 . 129 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 59.0 8.5e-43 171.4
Csa01g02184 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29930 50.5 3.5e-43 172.2
Csa06g01239 . 9 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 52.2 7.3e-56 214.5
Csa05g02577 . 63 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 57.4 1.6e-73 273.5
Csa03g03991 . 70 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.1 3.3e-39 159.5
Csa06g02222 . 84 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 82.8 1.4e-44 177.2
Csa03g01590 . 246 439 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 51.0 4.4e-38 155.6
Csa01g02184 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 61.7 1.0e-51 200.3
Csa02g00670 . 1 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 52.1 2.0e-47 186.0
Csa04g02418 CCT,ECH 16 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 56.0 2.1e-44 176.0
Csa02g01465 . 50 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 71.3 8.4e-41 164.1
Csa02g01941 CCT,ECH 89 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 75.5 1.3e-36 150.2
Csa06g02787 . 73 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.1e-36 150.2
Csa06g02787 . 78 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 9.6e-42 167.2
Csa01g00391 CCT,ECH 90 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 67.3 1.3e-44 176.8
Csa01g00665 CCT,ECH 134 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 78.5 8.1e-42 167.5
Csa03g01369 . 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 66.5 3.3e-57 218.4
Csa03g03604 . 22 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42300 52.0 2.7e-44 175.6
Csa04g02505 CCT 215 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 55.0 2.2e-46 183.7
Csa03g04609 . 72 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.1 4.8e-149 525.0
Csa03g00171 . 47 631 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.7 2.9e-146 515.8
Csa01g00391 CCT,ECH 9 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 51.1 1.2e-48 190.3
Csa01g00665 CCT,ECH 83 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 58.5 2.3e-47 186.0
Csa04g02472 CCT,ECH 149 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 82.3 3.3e-38 155.6
Csa02g01899 CCT,ECH 233 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.3 3.7e-37 152.1
Csa07g00008 . 239 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 77.6 7.9e-39 157.9
Csa07g01674 . 75 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.2 1.7e-95 345.9
Csa01g02842 . 59 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 59.4 5.2e-65 244.6
Csa01g01870 . 152 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.0 1.0e-44 177.2
Csa02g00267 . 209 377 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 61.5 2.4e-41 166.0
Csa03g04609 . 1 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.1 3.3e-172 602.1
Csa03g00171 . 49 631 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.5 7.8e-158 554.3
Csa03g03604 . 1 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 52.6 1.9e-82 303.1
Csa06g03087 . 146 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 61.4 7.6e-61 231.1
Csa02g02231 CCT 196 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.8 7.4e-56 214.5
Csa03g04520 CCT 150 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 61.7 1.1e-54 210.7
Csa07g00008 . 245 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 85.3 1.3e-39 161.0
Csa05g01353 . 334 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 81.4 3.3e-38 156.4
Csa05g02541 . 371 467 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 80.4 9.6e-38 154.8
Csa07g00008 . 232 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.7 1.7e-42 170.2
Csa03g01590 . 349 443 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 80.0 7.4e-38 154.8
Csa02g01259 . 145 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 71.0 2.8e-37 152.9
Csa05g02541 . 372 464 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 1.1e-36 151.0
Csa07g00008 . 226 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.1 2.5e-39 159.8
Csa01g01870 . 199 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.2 2.6e-64 242.3
Csa02g00267 . 209 420 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.9 3.2e-62 235.3
Csa01g02842 . 142 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.5 2.4e-46 182.6
Csa07g01674 . 142 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 58.2 1.5e-43 173.3
Csa01g01870 . 201 423 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.5 3.8e-56 215.7
Csa02g00267 . 214 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.3 1.9e-55 213.4
Csa07g01674 . 151 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 6.2e-43 171.8
Csa01g02842 . 154 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.7 1.8e-42 170.2
Csa07g01674 . 1 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 60.7 3.5e-88 322.0
Csa01g02842 . 135 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 63.7 6.4e-58 221.5
Csa01g01870 . 197 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 56.8 2.4e-41 166.4
Csa02g00267 . 214 391 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 54.4 5.1e-39 158.7
Csa05g02541 . 362 569 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 52.9 1.3e-43 174.1
Csa05g01353 . 325 431 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 77.6 1.0e-40 164.5
Csa01g00391 CCT,ECH 133 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 62.6 3.2e-37 152.1
Csa03g01590 . 350 471 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 66.9 1.2e-36 151.0
Csa05g01353 . 325 509 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 53.8 2.3e-40 163.3
Csa05g02541 . 365 547 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 50.5 4.3e-39 159.1
Csa07g00008 . 232 367 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 65.0 2.2e-38 156.8
Csa04g02505 CCT 223 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 56.5 9.1e-37 151.4
Csa05g02541 . 365 515 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 59.7 6.0e-38 155.6
Csa07g00008 . 234 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 75.7 6.0e-38 155.6
Csa05g01353 . 321 426 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 72.9 6.7e-37 152.1
Csa06g02222 . 93 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 66.4 2.1e-46 183.0
Csa01g00196 . 1 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 56.2 4.9e-43 171.8
Csa05g03229 . 1 206 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 51.1 6.0e-47 184.5
Csa05g03229 . 24 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 59.2 1.6e-64 243.0
Csa01g01870 . 165 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 63.8 3.7e-57 218.8
Csa02g00267 . 214 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 71.2 1.5e-53 206.8
Csa01g02842 . 142 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 59.9 2.1e-44 176.4
Csa07g01674 . 151 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 57.7 8.8e-43 171.0
Csa05g01584 . 129 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 68.4 5.8e-42 168.3
Csa04g00038 . 185 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 58.4 2.3e-39 159.8
Csa04g02472 CCT,ECH 153 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 78.8 6.4e-37 151.8
Csa04g00038 . 244 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 4.1e-39 159.1
Csa04g02472 CCT,ECH 153 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 95.2 9.2e-39 157.9
Csa02g01899 CCT,ECH 233 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 88.5 7.8e-38 154.8
Csa07g00687 . 108 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 85.7 1.5e-36 150.6
Csa04g02418 CCT,ECH 107 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 92.7 8.9e-43 170.6
Csa02g01465 . 76 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 86.3 1.1e-40 163.7
Csa02g01941 CCT,ECH 103 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.5 4.3e-37 151.8
Csa03g04599 . 96 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 52.3 6.3e-42 168.3
Csa02g02175 . 2 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.9 2.1e-55 213.0
Csa02g00399 . 103 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 1.2e-45 180.6
Csa03g01101 . 66 382 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.3 2.3e-94 342.8
Csa03g04609 . 72 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.1 4.8e-149 525.0
Csa03g00171 . 47 631 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.7 2.9e-146 515.8
Csa03g04609 . 1 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.1 3.3e-172 602.1
Csa03g00171 . 49 631 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.5 7.8e-158 554.3
Csa07g01674 . 1 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 60.7 3.5e-88 322.0
Csa01g02842 . 135 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 63.7 6.4e-58 221.5
Csa01g01870 . 197 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 56.8 2.4e-41 166.4
Csa02g00267 . 214 391 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 54.4 5.1e-39 158.7
Csa03g00798 . 42 641 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 52.4 4.0e-156 548.5
Csa06g02951 . 129 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 59.0 8.5e-43 171.4
Csa01g02184 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29930 50.5 3.5e-43 172.2
Csa06g01239 . 9 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 52.2 7.3e-56 214.5
Csa05g02577 . 63 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 57.4 1.6e-73 273.5
Csa03g03991 . 70 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.1 3.3e-39 159.5
Csa06g02222 . 84 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 82.8 1.4e-44 177.2
Csa03g01590 . 246 439 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 51.0 4.4e-38 155.6
Csa01g02184 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 61.7 1.0e-51 200.3
Csa02g00670 . 1 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 52.1 2.0e-47 186.0
Csa04g02418 CCT,ECH 16 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 56.0 2.1e-44 176.0
Csa02g01465 . 50 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 71.3 8.4e-41 164.1
Csa02g01941 CCT,ECH 89 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 75.5 1.3e-36 150.2
Csa06g02787 . 73 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.1e-36 150.2
Csa06g02787 . 78 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 9.6e-42 167.2
Csa01g00391 CCT,ECH 90 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 67.3 1.3e-44 176.8
Csa01g00665 CCT,ECH 134 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 78.5 8.1e-42 167.5
Csa03g01369 . 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 66.5 3.3e-57 218.4
Csa03g03604 . 22 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42300 52.0 2.7e-44 175.6
Csa04g02505 CCT 215 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 55.0 2.2e-46 183.7
Csa01g00391 CCT,ECH 9 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 51.1 1.2e-48 190.3
Csa01g00665 CCT,ECH 83 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 58.5 2.3e-47 186.0
Csa04g02472 CCT,ECH 149 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 82.3 3.3e-38 155.6
Csa02g01899 CCT,ECH 233 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.3 3.7e-37 152.1
Csa07g00008 . 239 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 77.6 7.9e-39 157.9
Csa07g01674 . 75 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.2 1.7e-95 345.9
Csa01g02842 . 59 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 59.4 5.2e-65 244.6
Csa01g01870 . 152 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.0 1.0e-44 177.2
Csa02g00267 . 209 377 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 61.5 2.4e-41 166.0
Csa03g03604 . 1 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 52.6 1.9e-82 303.1
Csa06g03087 . 146 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 61.4 7.6e-61 231.1
Csa02g02231 CCT 196 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.8 7.4e-56 214.5
Csa03g04520 CCT 150 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 61.7 1.1e-54 210.7
Csa07g00008 . 245 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 85.3 1.3e-39 161.0
Csa05g01353 . 334 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 81.4 3.3e-38 156.4
Csa05g02541 . 371 467 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 80.4 9.6e-38 154.8
Csa07g00008 . 232 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.7 1.7e-42 170.2
Csa03g01590 . 349 443 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 80.0 7.4e-38 154.8
Csa02g01259 . 145 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 71.0 2.8e-37 152.9
Csa05g02541 . 372 464 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 1.1e-36 151.0
Csa07g00008 . 226 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.1 2.5e-39 159.8
Csa01g01870 . 199 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.2 2.6e-64 242.3
Csa02g00267 . 209 420 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.9 3.2e-62 235.3
Csa01g02842 . 142 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.5 2.4e-46 182.6
Csa07g01674 . 142 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 58.2 1.5e-43 173.3
Csa01g01870 . 201 423 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.5 3.8e-56 215.7
Csa02g00267 . 214 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.3 1.9e-55 213.4
Csa07g01674 . 151 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 6.2e-43 171.8
Csa01g02842 . 154 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.7 1.8e-42 170.2
Csa05g02541 . 362 569 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 52.9 1.3e-43 174.1
Csa05g01353 . 325 431 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 77.6 1.0e-40 164.5
Csa01g00391 CCT,ECH 133 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 62.6 3.2e-37 152.1
Csa03g01590 . 350 471 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 66.9 1.2e-36 151.0
Csa05g01353 . 325 509 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 53.8 2.3e-40 163.3
Csa05g02541 . 365 547 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 50.5 4.3e-39 159.1
Csa07g00008 . 232 367 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 65.0 2.2e-38 156.8
Csa04g02505 CCT 223 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 56.5 9.1e-37 151.4
Csa05g02541 . 365 515 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 59.7 6.0e-38 155.6
Csa07g00008 . 234 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 75.7 6.0e-38 155.6
Csa05g01353 . 321 426 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 72.9 6.7e-37 152.1
Csa06g02222 . 93 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 66.4 2.1e-46 183.0
Csa01g00196 . 1 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 56.2 4.9e-43 171.8
Csa05g03229 . 1 206 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 51.1 6.0e-47 184.5
Csa05g03229 . 24 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 59.2 1.6e-64 243.0
Csa01g01870 . 165 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 63.8 3.7e-57 218.8
Csa02g00267 . 214 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 71.2 1.5e-53 206.8
Csa01g02842 . 142 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 59.9 2.1e-44 176.4
Csa07g01674 . 151 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 57.7 8.8e-43 171.0
Csa05g01584 . 129 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 68.4 5.8e-42 168.3
Csa04g00038 . 185 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 58.4 2.3e-39 159.8
Csa04g02472 CCT,ECH 153 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 78.8 6.4e-37 151.8
Csa04g00038 . 244 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 4.1e-39 159.1
Csa04g02472 CCT,ECH 153 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 95.2 9.2e-39 157.9
Csa02g01899 CCT,ECH 233 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 88.5 7.8e-38 154.8
Csa07g00687 . 108 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 85.7 1.5e-36 150.6
Csa04g02418 CCT,ECH 107 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 92.7 8.9e-43 170.6
Csa02g01465 . 76 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 86.3 1.1e-40 163.7
Csa02g01941 CCT,ECH 103 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.5 4.3e-37 151.8
Csa03g04599 . 96 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 52.3 6.3e-42 168.3
Csa02g02175 . 2 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.9 2.1e-55 213.0
Csa02g00399 . 103 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 1.2e-45 180.6
Csa03g01101 . 66 382 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.3 2.3e-94 342.8
Csa06g02106 . 1 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 50.9 9.5e-80 293.9
Csa03g01221 . 54 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 60.0 1.3e-40 163.7
Csa03g02287 . 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 68.0 7.4e-61 230.7
Csa02g02706 . 5 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 56.1 3.1e-43 172.2
Csa01g01130 . 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 50.2 7.2e-40 161.0
Csa03g03991 . 50 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 62.3 5.7e-59 224.6
Csa03g00554 . 242 439 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 54.7 2.1e-47 186.8
Csa01g01146 . 220 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 61.3 3.3e-37 152.9
Csa03g02566 . 42 501 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 53.2 9.3e-111 397.5
Csa01g00990 . 51 523 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 50.2 3.5e-102 369.0
Csa02g01354 . 42 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 62.0 1.6e-50 196.8
Csa06g03326 . 48 300 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 57.8 2.6e-45 179.5
Csa06g03565 . 212 405 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 50.7 2.0e-42 170.2
Csa04g00386 . 110 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 56.7 7.3e-56 214.5
Csa01g00988 CCT 175 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 65.9 7.5e-41 164.5
Csa06g01863 . 40 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 60.2 2.0e-42 169.5
Csa03g01527 . 41 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.5 2.1e-39 159.5
Csa06g01863 . 38 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.9 5.4e-45 177.9
Csa03g01527 . 41 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.5 1.3e-38 156.8
Csa04g00280 . 23 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.8 2.9e-43 171.8
Csa04g00280 . 21 154 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 68.1 1.5e-41 166.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010773 0 2 0 0 0 1 2 1 1 1 1 1 2 2 1 2 1 0 2 1 1 1 1 1 1 1 1 1 2 0 31
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30864 PF00010 HLH 1.60E-09 No_clan Csa TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa02g00267 Csa_Chr02 FPKM 5.92707 6.45471 4.617404 3.918937 5.591412 5.594241 5.950294 3.842072 3.817915 4.235487