Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00493 ATGGGAGGTTTGAGTGAGGGTCTAACACAGTTGCTGATACCTGCAGCTGCTCTTCTTGGTATTGGATTTGCTCTTCTTCAATGGCTTTTGGTTTCAAGAGTTAAGGTTTATAGCTACCCTGATGATGAAAGCCAAGAAAACAACTTGATTGAAGGAGGACAAGAGGAAGGTATTGATGACGTCGAGGTTGTCGCAAAGTGTGCCGAAATCCAGAAGGCAATTTCTGTTGGAGCAACATCATTTTTATTCACACAGTATAAATACCTTGTTGTCTTCATGGGAGCATTTGGAGCCATCATTTTCCTATTCCTTGGTTCTGTTAAGAGCTTCAGCACCAAAAGTGAACCTTGCACGTACAACAAAGGACAAATGTGTAAACCAGCTCTGGCCAATGCCATTTTTAGCACAATTGCCTTCTTGCTAGGTGCTCTCACCTCAGTACTATCTGGTTTTCTTGGAATGAAGATTGCAACTTATGCAAATGCACGAACAAGTCTAGAAGCACGGAGAGGCATTGGAAGAGCATTTGTTATTGCTTTTCGCTCTGGTGCTGTGATGGGATTCCTTCTAGCTGCCAATGGTCTCCTTGTGTTGTATGCCTCCATCAATTTGTTTAAACTGTATTATGGCGACGATTGGGAAGGATTGTATGAATCCATCACGGGTTACGGTCTTGGAGGTTCTTCAATGGCGTTGTTTGGAAGAGTTGGGGGTGGTATATACACAAAAGCGGCGGATGTTGGAGCTGATCTTGTAGGGAAAATTGAAAAGAATATTCCGGAGGACGATCCAAGAAATCCTGCTGTCATAGCTGACAATGTGGGTGACAATGTAGGAGATATTGCAGGAATGGGATCTGACTTATTTGGATCTTATGCAGAATCAACCTGTGCCGCACTTTTCGTGGCATCAATATCGTCCTTTGGCTCTACACATAACTATGTAGCCATGTCCTACCCTCTACTTATAAGCTCAATGGGAATTGTGATTTGCTTAATAACTACACTTTTTGCAACTGACTTCATTGAGATTAAGAAAGTGAGCCAAATCGAACCGTCATTAAAGCGGCAACTTCTTATCTCCACTGTTTTAATGACAGTAGGAGTAGCTCTAGTCAGCTTTGTTGCTTTACCTTCAAAATTCACTCTTTATGATTTCGGTAGCGACAAGGTCGTAAAGAACTGGCACATTTTCTTCTGTGTTGTGACAGGATTATGGGCAGGACTTGTTATTGGATACACAACTGAGTATTACACTAGCAATGCTTACAGTCCAGTGCAGGATGTAGCTGATTCTTGCAGAACTGGTGCCGCAACAAATGTAATATTTGGATTAGCTCTTGGATACAAATCCGTCATCATTCCGATATTTTCAATTGCCTTATCCATTTATGTGAGCTTCCGCTTGGGAGCTATGTATGGTATTGCAATGGCTGCTTTGGGAATGCTTAGCACCATTGCCACTGGTCTAGCCATTGATGCTTATGGTCCAATAAGTGACAATGCAGGTGGAATAGCCGAAATGGCTGGAATGAGCCACGAGATACGCGAGAGAACCGATGCTTTAGACGCTGCAGGAAACACGACTGCAGCCATAGGAAAGGGCTTTGCCATTGGATCAGCTGCTCTTGTTTCCCTTGCCTTGTTCGGCGCCTTCGTAAGCCGAGCAGACATCGAAACAGTCAACGTAATGAATCCAAAAGTTTTCATAGGATTGATAGTGGGTGCAATGCTTCCATACTGGTTTTCAGCCATGACAATGAAGAGCGTTGGCAGTGCAGCGCTGAAGATGGTCGAGGAAGTTCGACGACAATTCAACACTATCCCTGGGCTGATGGAAGGCAGGACGAAGCCAGACTATGCAAATTGTGTGAAGATATCAACCGATGCTTCGCTTAAAGAAATGATCCCACCTGGTGGTCTTGTTTTGGTAACACCACTCATTGCTGGAACATTCTTTGGAGTTGAAACTCTTGCTGGCCTTTTGGCTGGTTCTCTTGTTTCTGGAGTGCAGGTTGCTATCTCTGCTTCAAACACAGGTGGGGCTTGGGATAATGCAAAAAAGTACATTGAGGCAGGAAGAAGTGAACATGCGAAAGCACTTGGTCCCAAAGGGTCAGATGCTCACAAGGCAGCTGTGATAGGTGACACTGTTGGGGATCCTCTCAAAGACACTTCCGGCCCCTCACTCAATATTCTCATCAAGCTTATGGCCGTTGAGTCTTTAGTTTTTGCCCCTTTTTTTGCTGCCCATGGTGGCATCATCTTCAAATATATATAA 2280 44.08 MGGLSEGLTQLLIPAAALLGIGFALLQWLLVSRVKVYSYPDDESQENNLIEGGQEEGIDDVEVVAKCAEIQKAISVGATSFLFTQYKYLVVFMGAFGAIIFLFLGSVKSFSTKSEPCTYNKGQMCKPALANAIFSTIAFLLGALTSVLSGFLGMKIATYANARTSLEARRGIGRAFVIAFRSGAVMGFLLAANGLLVLYASINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIEKNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGSTHNYVAMSYPLLISSMGIVICLITTLFATDFIEIKKVSQIEPSLKRQLLISTVLMTVGVALVSFVALPSKFTLYDFGSDKVVKNWHIFFCVVTGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFSIALSIYVSFRLGAMYGIAMAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRADIETVNVMNPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGRTKPDYANCVKISTDASLKEMIPPGGLVLVTPLIAGTFFGVETLAGLLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGRSEHAKALGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGIIFKYI* 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3480114 3486936 - CsaV3_2G007000.1 Csa02g00493 518550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00493 759 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 757 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa02g00493 759 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 5 757 - -
Csa02g00493 759 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 749 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa02g00493 759 PIRSF H+-PPtase 21 757 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa02g00493 759 Pfam Inorganic H+ pyrophosphatase 48 744 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa02g00493 759 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 9 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Csa02g00493 759 Coils Coil 759 759 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01806 Csa-Chr1:15009088 Csa02g00493 Csa-Chr2:3480114 0 dispersed
Csa02g00493 Csa-Chr2:3480114 Csa07g02272 Csa-Chr7:21165230 1.93E-149 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00493 K23025 - csv:101205277 1459.12