Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00501 ATGTCGGAGCTTGGAGAACTTTACCACAAGATCTCCACTCTTGAGAGCCTCAAACCCTCTAAACATGTCAACTCCCTCTTCTCTCAACTTGTACTCCTCATTTGCACCCCTTCTTCCTCGTCCATCGACGTCTCCACGCTCTGCTCCACCATCCAAACCATGAGATCCCATCTCATCAAGCTCTGTGGCGAGGCCGAGTCCCTTCTCGAGCATCACTACTCCACCATTTTATCTTCCCACCAAAACCCTCTCGACCATCTCTCCCTCTTCCCTTATTACTCCAACTACCTCAAACTCACTCACTTAGAATTCTCCATTTTGAACCACCACGCCCCCCACAGTACTACTACGCCTCCCTCTAAAGTGGCATTTGTTGGCTCCGGTGCACTTCCCTTCTCGTCTATCATCATGGCCTTGAAGTACTTCCCAAAAACCGAGTTTCACAACTTCGACCTCGACCCGTCTGCCAATGCGAAAGCATCGATGCTGGTAGCAGGCGACGTGGAGCTGTCGAGGCGGATGGTGTTCCACACGACCGACATCATGGACGTCGGGTCGGAAGAGTTGAGGGAGTTCGAGGTGGTGTTTCTGGCGGCGTTGGTGGGGATGGAGAGAGAAGAGAAGGGGAAGGTGATCGAGCATTTGAGGAAGAATATGAGTGGTGGGGCGTTGTTGATGTTGAGGAGCGCATATGGTGCACGGGCGTTTGTTTATCCGGTGGTGGAAGCTTGTGATCTTCGGGGTTTAGATATTAATTAA 759 51.52 MSELGELYHKISTLESLKPSKHVNSLFSQLVLLICTPSSSSIDVSTLCSTIQTMRSHLIKLCGEAESLLEHHYSTILSSHQNPLDHLSLFPYYSNYLKLTHLEFSILNHHAPHSTTTPPSKVAFVGSGALPFSSIIMALKYFPKTEFHNFDLDPSANAKASMLVAGDVELSRRMVFHTTDIMDVGSEELREFEVVFLAALVGMEREEKGKVIEHLRKNMSGGALLMLRSAYGARAFVYPVVEACDLRGLDIN* 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3524496 3535698 + CsaV3_2G007080.1 Csa02g00501 518558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00501 252 Pfam Nicotianamine synthase protein 3 251 IPR004298 GO:0030410|GO:0030418
Csa02g00501 252 PANTHER NICOTIANAMINE SYNTHASE 3 3 251 IPR004298 GO:0030410|GO:0030418
Csa02g00501 252 PANTHER SYNTHASE, PUTATIVE-RELATED 3 251 - -
Csa02g00501 252 Gene3D Vaccinia Virus protein VP39 1 252 IPR029063 -
Csa02g00501 252 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 252 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa01g02710 Csa02g00501 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00501 Csa-Chr2:3524496 Csa02g00502 Csa-Chr2:3536310 1.26E-87 tandem
Csa01g02710 Csa-Chr1:24042009 Csa02g00501 Csa-Chr2:3524496 3.14E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00501 K05953 - csv:101219339 488.804