Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g00655 | ATGAGTGAGGAGGCAACCGAGAAGATGAATAAGAAAGTAATAAAAGAAAACAAAAAAATGGAAAGAAGCCATTTTGATGTGTTGGGAATTTGCTGTTCTTCAGAAATCCCTTTGATTGAAAACATCCTCAAACCCCTCCAAGGAATCAAACAAATCACTGTCATTGTCCCTACAAGAACACTCATTGTTGTTCATGATTCGCTTCTCATTTCCCAACTTCAAATTGTGAAAGCTCTAAATGAAGCAAGATTGGAGGCAAATATACAATTAAAAGGAAAGGGAATTATGAAGAAGAAATGGCCAAGTCCTTATGCAATAGCCAGTGGGTTGCTTCTAACTGCGTCGTTTTTGAAGTATGTCTACCACCCATTGCGGTGGCTTGCCGTTGCAGCCGTTGCCGCCGGCATCTTTCCCATTCTTCTAAAAGCCATTTCTGCCATTCGCCACCTCAGAGTTGATGTCAACATTCTTGCTATTATTGCAGTTGTGGGGACAATTGCAATGGATGATTATATGGAAGCTGGGAGTATAGTGTTTTTGTTTTCCATTGCCGAATGGCTTGAGTCAAGAGCAAGCCACAAGGCGAATGGTGCAATGTGTTCACTAATGAGGTTAGCTCCCCAGAAAGCCACAATAGCTGAAAGTGGAGAGGTTGTGGATGTAAGAGATGTGAAATTGAAGAGTGTGTTAGGTGTGAAAGCTGGAGAAGTTATTCCGATTGATGGGATTGTTGTTGAAGGCAATTGTGAAGTTGATGAGAAAACTTTGAGTGGAGAAACTTTCCCTGTTACCAAACAAAAAGATTCTCTTGTTTGGGCTGGTACCATCAACTTAAATGGTTACATAAGTGTTCAAACAACAGTTGTAGCTGAGGATTGTGTGGTAGCAAAAATGGCTGAGCTTGTAGAAGAAGCTCAAAATAACAAATCAAAAACTCAAACATTCATTGATGAATGTGCCAAATATTACACCCCAGCTGTTGTTATCATCTCAGCTTGTCTAGCAGCCATTCCAGCTGCATTGCGAGTTCATAATCTCAGGCATTGGCTTCACTTAGCTTTGGTGGTTTTAGTGAGTGCATGTCCTTGTGCCTTAATCCTCTCCACCCCGGTCGCCGCATTTTGTGCTCTTACGAAGGCAGCCATGGCCGGAGTTTTGATCAAAGGCGGCAACCACCTTGAAGTTCTTGCAAAGATTAAGGTTATGGCCTTTGATAAAACTGGCACGATCACTAGAGGTGAATTTGTTGTAACACATTTTCAAGCTCTAAGAGATGATATTAACTTCCACACCTTGCTCCAATGGGTTTCAAGCATTGAGAGCAAATCAAGCCATCCAATGGCAACTGCCCTTGTCAACTACGGAAAGCTGCATTCTATCGATCTTAAGCCGGAAAACGTAGAGGAATTTGAAAATTTTCTAGGAGAAGGTGTTCGTGGGAAGATAGATGGTAATGATATTTACATTGGAAGCAAAAAAATTGCTGCCAGAGCTGGCTACGACATACCAGTTTCTTCAAAATTGAACAACTTTGACGATGAAACGAGACAAGAGCAAACCCTTGGATATGTATTTTGTGGGGGGATGATGATTGGATCTTTCGGTTTATTGGATTCGTGTCGTTCCGGAGTTAAAGAGGCAATCGAGGAGATCAAAAGTTTTGGAATTAAAACTGCTATGCTCACAGGAGATTGTAGGGCAGCTGCCATGCATGTCCAAGAACAGCTCGGGAATACGCTTGACGTAATCCATTCAGAACTTCTACCAAAGGAGAAGGCAAATATCATAAAAGAATTTAAAAATAATGATGGAGCAATTGCCATGGTTGGAGATGGCTTAAATGATACCCCAGCATTAGCTACCGCTGATATTGGCATGTCAATGGGTATTTCAGGTTCAGCATTGGCCACTGAAACTGGGAATGTGATTTTAATGTCAAATGACATGAGAAAGATTCCAAAAGCCATCAAACTAGCAAAGACATTCCACACAAAAGTAGTTCAAAATGTCATTTTGTCAATCGGTACAAAGACTGCCATCCTAGGCTTGGCATTTGCTGGACATCCCCTCATTTGGGCAGCCGTTCTTGCTGATGTCGGTACTTGTCTATTGGTCATCTTGAACAGCATGCTCCTTTTGAGAGGAATGGATCACAAACATGGAAAGAAAAAATGTTGCAAATCTTCCAAACCATGCTTAACGAAACATGGACAACTGTGCGATGGTGCTAGATCTTCTCATCATCACAGCCATCATCATGATCATGATCATGATCATGATCACCATAATCATCGATGCCATGTCGTCGATGATCAATCAGCTAGTCAAGAGAATAATCATGTCCATAAGCATTGTTGTTGTGAGGAAAAGGATCACAAGATGCAACTTTCACAAGATCACAATAAAGAAACATGTGGAGTACTGAACCAAGAGAAGAATAATCATGAATGTGGAGAGCATGAGTGTGAGGAAACTAATGTGCATCATAAAAAAGAAGATAAATTTCATCATAACTATTCAAATCAATGTGAGAAAACCCCACTTGAGAGAGAGATTAGGGGAAATTCTTCAAAGAGAGTGGGTAAATCAGATTGTAATTGCCACTCACATCATGTTACAATTGACATTCATGAAAGTAATGAGTGTGAGAGAGTAGATCATAATTAG | 2667 | 40.68 | MSEEATEKMNKKVIKENKKMERSHFDVLGICCSSEIPLIENILKPLQGIKQITVIVPTRTLIVVHDSLLISQLQIVKALNEARLEANIQLKGKGIMKKKWPSPYAIASGLLLTASFLKYVYHPLRWLAVAAVAAGIFPILLKAISAIRHLRVDVNILAIIAVVGTIAMDDYMEAGSIVFLFSIAEWLESRASHKANGAMCSLMRLAPQKATIAESGEVVDVRDVKLKSVLGVKAGEVIPIDGIVVEGNCEVDEKTLSGETFPVTKQKDSLVWAGTINLNGYISVQTTVVAEDCVVAKMAELVEEAQNNKSKTQTFIDECAKYYTPAVVIISACLAAIPAALRVHNLRHWLHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGGNHLEVLAKIKVMAFDKTGTITRGEFVVTHFQALRDDINFHTLLQWVSSIESKSSHPMATALVNYGKLHSIDLKPENVEEFENFLGEGVRGKIDGNDIYIGSKKIAARAGYDIPVSSKLNNFDDETRQEQTLGYVFCGGMMIGSFGLLDSCRSGVKEAIEEIKSFGIKTAMLTGDCRAAAMHVQEQLGNTLDVIHSELLPKEKANIIKEFKNNDGAIAMVGDGLNDTPALATADIGMSMGISGSALATETGNVILMSNDMRKIPKAIKLAKTFHTKVVQNVILSIGTKTAILGLAFAGHPLIWAAVLADVGTCLLVILNSMLLLRGMDHKHGKKKCCKSSKPCLTKHGQLCDGARSSHHHSHHHDHDHDHDHHNHRCHVVDDQSASQENNHVHKHCCCEEKDHKMQLSQDHNKETCGVLNQEKNNHECGEHECEETNVHHKKEDKFHHNYSNQCEKTPLEREIRGNSSKRVGKSDCNCHSHHVTIDIHESNECERVDHN* | 889 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4969020 | 4975670 | + | CsaV3_2G008620.1 | Csa02g00655 | 518712 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g00655 | 888 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 405 | 411 | IPR018303 | - | |
Csa02g00655 | 888 | Gene3D | - | 395 | 660 | IPR023214 | - | |
Csa02g00655 | 888 | PRINTS | P-type cation-transporting ATPase superfamily signature | 252 | 266 | - | - | |
Csa02g00655 | 888 | PRINTS | P-type cation-transporting ATPase superfamily signature | 403 | 417 | - | - | |
Csa02g00655 | 888 | PRINTS | P-type cation-transporting ATPase superfamily signature | 532 | 543 | - | - | |
Csa02g00655 | 888 | PRINTS | P-type cation-transporting ATPase superfamily signature | 554 | 564 | - | - | |
Csa02g00655 | 888 | PRINTS | P-type cation-transporting ATPase superfamily signature | 609 | 628 | - | - | |
Csa02g00655 | 888 | PRINTS | P-type cation-transporting ATPase superfamily signature | 633 | 645 | - | - | |
Csa02g00655 | 888 | Gene3D | - | 192 | 306 | - | - | |
Csa02g00655 | 888 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 177 | 687 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Csa02g00655 | 888 | ProSiteProfiles | Heavy-metal-associated domain profile. | 22 | 88 | IPR006121 | GO:0046872 | |
Csa02g00655 | 888 | Gene3D | - | 414 | 540 | IPR023299 | GO:0000166 | |
Csa02g00655 | 888 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED | 15 | 733 | - | - | |
Csa02g00655 | 888 | MobiDBLite | consensus disorder prediction | 743 | 764 | - | - | |
Csa02g00655 | 888 | Pfam | E1-E2 ATPase | 206 | 381 | - | - | |
Csa02g00655 | 888 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 155 | 397 | IPR023298 | - | |
Csa02g00655 | 888 | Gene3D | - | 16 | 89 | - | - | |
Csa02g00655 | 888 | SUPERFAMILY | Calcium ATPase, transduction domain A | 217 | 302 | IPR008250 | - | |
Csa02g00655 | 888 | SFLD | p-type atpase | 385 | 660 | IPR044492 | - | |
Csa02g00655 | 888 | SUPERFAMILY | HAD-like | 402 | 710 | IPR036412 | - | |
Csa02g00655 | 888 | SFLD | C1.7: P-type atpase like | 385 | 660 | - | - | |
Csa02g00655 | 888 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 15 | 733 | - | - | |
Csa02g00655 | 888 | TIGRFAM | ATPase-IB2_Cd: cadmium-translocating P-type ATPase | 154 | 498 | - | - | |
Csa02g00655 | 888 | SUPERFAMILY | HMA, heavy metal-associated domain | 18 | 86 | IPR036163 | GO:0046872 | |
Csa02g00655 | 888 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 154 | 712 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Csa02g00655 | 888 | Pfam | haloacid dehalogenase-like hydrolase | 399 | 623 | - | - | |
Csa02g00655 | 888 | CDD | P-type_ATPase_HM | 105 | 711 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g00655 | Csa-Chr2:4969020 | Csa06g03896 | Csa-Chr6:30800528 | 1.78E-75 | dispersed | |
Csa02g01427 | Csa-Chr2:13698624 | Csa02g00655 | Csa-Chr2:4969020 | 8.40E-76 | transposed | |
Csa01g02172 | Csa-Chr1:18849770 | Csa02g00655 | Csa-Chr2:4969020 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g00655 | K01534 | - | csv:101203668 | 1680.61 |